RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C PRT1P06103 763 aaKnown RBP9.76□□□□□ -0.85
NMD4YLR363C FPK1P53739 893 aa9.76□□□□□ -0.85
NMD4YLR363C GYP1Q08484 637 aa9.76□□□□□ -0.85
NMD4YLR363C RTF1P53064 558 aa9.75□□□□□ -0.85
NMD4YLR363C SAS4Q04003 481 aa9.75□□□□□ -0.85
NMD4YLR363C KEX2P13134 814 aa9.74□□□□□ -0.85
NMD4YLR363C YNL115CP53925 644 aa9.73□□□□□ -0.85
NMD4YLR363C HST2P53686 357 aa9.71□□□□□ -0.86
NMD4YLR363C ERF2Q06551 359 aa9.71□□□□□ -0.86
NMD4YLR363C TY1A-DR4O74302 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-HP0C2I4 478 aaKnown RBP9.7□□□□□ -0.86
NMD4YLR363C TY1A-AP0CX57 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-PR1P0CX58 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-ORP0CX59 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-PR2P0CX60 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-DR5P0CX65 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-ER2P0CX66 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-GR3P0CX67 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-LR1P0CX68 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-MR2P0CX69 440 aa9.7□□□□□ -0.86
NMD4YLR363C SEC2P17065 759 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-JR2P47099 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-DR1Q03856 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-ML1Q04706 440 aaKnown RBP9.7□□□□□ -0.86
NMD4YLR363C TY1A-BRQ12217 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-NL2Q12470 440 aa9.7□□□□□ -0.86
NMD4YLR363C TY1A-GR2Q12485 440 aa9.7□□□□□ -0.86
NMD4YLR363C GLN1P32288 370 aaKnown RBP9.68□□□□□ -0.86
NMD4YLR363C CSN12P47130 423 aa9.68□□□□□ -0.86
NMD4YLR363C MMP1Q12372 583 aa9.68□□□□□ -0.86
NMD4YLR363C SLY41P22215 453 aa9.65□□□□□ -0.86
NMD4YLR363C SCJ1P25303 377 aa9.64□□□□□ -0.87
NMD4YLR363C PAT1P25644 796 aaKnown RBP9.64□□□□□ -0.87
NMD4YLR363C TYW1Q08960 810 aaKnown RBP9.64□□□□□ -0.87
NMD4YLR363C MRF1P30775 413 aaPredicted RBP9.63□□□□□ -0.87
NMD4YLR363C SPT16P32558 1035 aaKnown RBP9.63□□□□□ -0.87
NMD4YLR363C SSA2P10592 639 aaKnown RBP9.62□□□□□ -0.87
NMD4YLR363C RRN7P40992 514 aa9.62□□□□□ -0.87
NMD4YLR363C KTR1P27810 393 aaKnown RBP9.61□□□□□ -0.87
NMD4YLR363C GUA1P38625 525 aaKnown RBP9.61□□□□□ -0.87
NMD4YLR363C ESS1P22696 170 aa9.6□□□□□ -0.87
NMD4YLR363C TUB4P53378 473 aa9.6□□□□□ -0.87
NMD4YLR363C AGE1Q04412 482 aa9.59□□□□□ -0.87
NMD4YLR363C PUS6P53294 404 aa9.57□□□□□ -0.88
NMD4YLR363C ERG12P07277 443 aa9.55□□□□□ -0.88
NMD4YLR363C SDH2P21801 266 aa9.55□□□□□ -0.88
NMD4YLR363C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88not detected
NMD4YLR363C HPC2Q01448 625 aa9.55□□□□□ -0.88
NMD4YLR363C PKH3Q03306 898 aaPredicted RBP9.55□□□□□ -0.88
NMD4YLR363C YJU3P28321 313 aa9.54□□□□□ -0.88
NMD4YLR363C PAC1P39946 494 aaKnown RBP9.54□□□□□ -0.88
NMD4YLR363C YEL077CQ3E7X8 1277 aa9.54□□□□□ -0.88
NMD4YLR363C TBF1Q02457 562 aa9.53□□□□□ -0.88
NMD4YLR363C LAM6Q08001 693 aa9.53□□□□□ -0.88
NMD4YLR363C TRM1P15565 570 aaKnown RBP9.52□□□□□ -0.89
NMD4YLR363C DPS1P04802 557 aaKnown RBP9.5□□□□□ -0.89
NMD4YLR363C AMS1P22855 1083 aa9.5□□□□□ -0.89
NMD4YLR363C ARG8P18544 423 aa9.49□□□□□ -0.89
NMD4YLR363C RSC30P38781 883 aa9.48□□□□□ -0.89
NMD4YLR363C KXD1P53158 218 aa9.48□□□□□ -0.89
NMD4YLR363C RAD59Q12223 238 aa9.48□□□□□ -0.89
NMD4YLR363C BRL1P38770 471 aa9.47□□□□□ -0.89
NMD4YLR363C YDL206WQ12424 762 aa9.47□□□□□ -0.89
NMD4YLR363C RPA14P50106 137 aa9.46□□□□□ -0.9
NMD4YLR363C HGH1P48362 394 aaKnown RBP9.45□□□□□ -0.9
NMD4YLR363C TFB3Q03290 321 aa9.45□□□□□ -0.9
NMD4YLR363C ALR1Q08269 859 aa9.45□□□□□ -0.9
NMD4YLR363C MOD5P07884 428 aa9.44□□□□□ -0.9
NMD4YLR363C YPR097WQ06839 1073 aa9.44□□□□□ -0.9
NMD4YLR363C RAS1P01119 309 aa9.43□□□□□ -0.9
NMD4YLR363C PDC1P06169 563 aaKnown RBP9.42□□□□□ -0.9
NMD4YLR363C TPD3P31383 635 aa9.42□□□□□ -0.9
NMD4YLR363C CST6P40535 587 aa9.42□□□□□ -0.9
NMD4YLR363C HXT10P43581 546 aa9.42□□□□□ -0.9
NMD4YLR363C BDP1P46678 594 aa9.41□□□□□ -0.9
NMD4YLR363C FRK1Q03002 865 aaPredicted RBP9.4□□□□□ -0.9
NMD4YLR363C RRD1P40454 393 aaKnown RBP9.37□□□□□ -0.91
NMD4YLR363C CSE4P36012 229 aa9.36□□□□□ -0.91
NMD4YLR363C PKC1P24583 1151 aa9.35□□□□□ -0.91
NMD4YLR363C DMA2P53924 522 aa9.35□□□□□ -0.91
NMD4YLR363C YBL036CP38197 257 aa9.34□□□□□ -0.91
NMD4YLR363C MAK16P10962 306 aaPredicted RBP9.32□□□□□ -0.92
NMD4YLR363C PUS5Q06244 254 aa9.3□□□□□ -0.92
NMD4YLR363C HED1Q03937 162 aa9.29□□□□□ -0.92
NMD4YLR363C SYH1Q02875 849 aaKnown RBP9.27□□□□□ -0.93
NMD4YLR363C NAF1P53919 492 aaKnown RBP9.26□□□□□ -0.93
NMD4YLR363C VAC17P25591 423 aa9.25□□□□□ -0.93
NMD4YLR363C SPT5P27692 1063 aaKnown RBP9.25□□□□□ -0.93
NMD4YLR363C KIP2P28743 706 aa9.25□□□□□ -0.93
NMD4YLR363C CLA4P48562 842 aa9.24□□□□□ -0.93
NMD4YLR363C IXR1P33417 597 aa9.23□□□□□ -0.93
NMD4YLR363C FIG4P42837 879 aa9.23□□□□□ -0.93
NMD4YLR363C YJL007CP47080 104 aa9.23□□□□□ -0.93
NMD4YLR363C TEC1P18412 486 aa9.22□□□□□ -0.93
NMD4YLR363C CDC4P07834 779 aa9.2□□□□□ -0.94
NMD4YLR363C TRK1P12685 1235 aa9.2□□□□□ -0.94
NMD4YLR363C BIO2P32451 375 aa9.2□□□□□ -0.94
NMD4YLR363C AIR1P40507 360 aaKnown RBP9.2□□□□□ -0.94
NMD4YLR363C SRC1Q03707 834 aa9.2□□□□□ -0.94
NMD4YLR363C BIM1P40013 344 aa9.18□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms