RNA–Protein interactions for RNA: YLR254C

NDL1, Transcript of Homolog of nuclear distribution factor NudE, yeastyeast

Gene NDL1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDL1YLR254C TY1A-JR2P47099 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-DR1Q03856 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-ML1Q04706 440 aaKnown RBP9.26□□□□□ -0.93
NDL1YLR254C TY1A-BRQ12217 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-NL2Q12470 440 aa9.26□□□□□ -0.93
NDL1YLR254C TY1A-GR2Q12485 440 aa9.26□□□□□ -0.93
NDL1YLR254C PBS2P08018 668 aa9.25□□□□□ -0.93
NDL1YLR254C CKB1P43639 278 aa9.24□□□□□ -0.93
NDL1YLR254C CST6P40535 587 aa9.23□□□□□ -0.93
NDL1YLR254C RRN7P40992 514 aa9.21□□□□□ -0.94
NDL1YLR254C AIR1P40507 360 aaKnown RBP9.19□□□□□ -0.94
NDL1YLR254C FRK1Q03002 865 aaPredicted RBP9.19□□□□□ -0.94
NDL1YLR254C PAT1P25644 796 aaKnown RBP9.18□□□□□ -0.94
NDL1YLR254C CLA4P48562 842 aa9.18□□□□□ -0.94
NDL1YLR254C KEX2P13134 814 aa9.17□□□□□ -0.94
NDL1YLR254C ERF2Q06551 359 aa9.16□□□□□ -0.94
NDL1YLR254C LAM6Q08001 693 aa9.16□□□□□ -0.94
NDL1YLR254C PSE1P32337 1089 aaKnown RBP9.13□□□□□ -0.95
NDL1YLR254C RGA1P39083 1007 aa9.13□□□□□ -0.95
NDL1YLR254C MAM3Q12296 706 aa9.13□□□□□ -0.95
NDL1YLR254C DMA1P38823 416 aa9.12□□□□□ -0.95
NDL1YLR254C BDP1P46678 594 aa9.12□□□□□ -0.95
NDL1YLR254C BRE2P43132 505 aa9.08□□□□□ -0.96
NDL1YLR254C GCR2Q01722 534 aa9.08□□□□□ -0.96
NDL1YLR254C IES2P40154 320 aa9.06□□□□□ -0.96
NDL1YLR254C CLB5P30283 435 aa9.05□□□□□ -0.96
NDL1YLR254C PAC1P39946 494 aaKnown RBP9.04□□□□□ -0.96
NDL1YLR254C CDC4P07834 779 aa9.03□□□□□ -0.96
NDL1YLR254C DSF2P38213 736 aa9.03□□□□□ -0.96
NDL1YLR254C SPB4P25808 606 aaPredicted RBP9.02□□□□□ -0.97
NDL1YLR254C SAS10Q12136 610 aaPredicted RBP9.02□□□□□ -0.97
NDL1YLR254C TUB4P53378 473 aa9.01□□□□□ -0.97
NDL1YLR254C HED1Q03937 162 aa9.01□□□□□ -0.97
NDL1YLR254C RGA2Q06407 1009 aa9.01□□□□□ -0.97
NDL1YLR254C GAR1P28007 205 aaKnown RBP9□□□□□ -0.97
NDL1YLR254C TEA1P47988 759 aa9□□□□□ -0.97
NDL1YLR254C YNL115CP53925 644 aa8.98□□□□□ -0.97
NDL1YLR254C AGE1Q04412 482 aa8.98□□□□□ -0.97
NDL1YLR254C NUP42P49686 430 aaKnown RBP8.97□□□□□ -0.97
NDL1YLR254C GBP2P25555 427 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
NDL1YLR254C RTF1P53064 558 aa8.96□□□□□ -0.98
NDL1YLR254C PUS5Q06244 254 aa8.96□□□□□ -0.98
NDL1YLR254C MOD5P07884 428 aa8.94□□□□□ -0.98
NDL1YLR254C DIT2P21595 489 aa8.94□□□□□ -0.98
NDL1YLR254C NIS1P53939 407 aa8.93□□□□□ -0.98
NDL1YLR254C SIT4P20604 311 aa8.92□□□□□ -0.98
NDL1YLR254C YPL062WQ02781 134 aa8.91□□□□□ -0.98
NDL1YLR254C ASH1P34233 588 aa8.9□□□□□ -0.98
NDL1YLR254C MET32Q12041 191 aa8.89□□□□□ -0.99
NDL1YLR254C SLY41P22215 453 aa8.87□□□□□ -0.99
NDL1YLR254C MET22P32179 357 aa8.87□□□□□ -0.99
NDL1YLR254C KXD1P53158 218 aa8.87□□□□□ -0.99
NDL1YLR254C HST3P53687 447 aa8.87□□□□□ -0.99
NDL1YLR254C FPK1P53739 893 aa8.85□□□□□ -0.99
NDL1YLR254C YMR196WQ04336 1088 aa8.85□□□□□ -0.99
NDL1YLR254C AFT1P22149 690 aa8.82□□□□□ -1
NDL1YLR254C HXT10P43581 546 aa8.81□□□□□ -1
NDL1YLR254C ENV9Q08651 330 aa8.8□□□□□ -1
NDL1YLR254C YDR444WQ04093 687 aa8.79□□□□□ -1
NDL1YLR254C PDC1P06169 563 aaKnown RBP8.78□□□□□ -1
NDL1YLR254C SCJ1P25303 377 aa8.77□□□□□ -1.01
NDL1YLR254C RRD1P40454 393 aaKnown RBP8.77□□□□□ -1.01
NDL1YLR254C TPD3P31383 635 aa8.76□□□□□ -1.01
NDL1YLR254C TBF1Q02457 562 aa8.76□□□□□ -1.01
NDL1YLR254C SYH1Q02875 849 aaKnown RBP8.76□□□□□ -1.01
NDL1YLR254C YJR115WP47152 169 aa8.75□□□□□ -1.01
NDL1YLR254C PUS6P53294 404 aa8.75□□□□□ -1.01
NDL1YLR254C ATF2P53296 535 aa8.74□□□□□ -1.01
NDL1YLR254C YDL206WQ12424 762 aa8.73□□□□□ -1.01
NDL1YLR254C ALR1Q08269 859 aa8.72□□□□□ -1.01
NDL1YLR254C KIP2P28743 706 aa8.71□□□□□ -1.02
NDL1YLR254C LCB5Q06147 687 aaKnown RBP8.71□□□□□ -1.02
NDL1YLR254C RPA14P50106 137 aa8.7□□□□□ -1.02
NDL1YLR254C HST2P53686 357 aa8.7□□□□□ -1.02
NDL1YLR254C MMP1Q12372 583 aa8.7□□□□□ -1.02
NDL1YLR254C TRM1P15565 570 aaKnown RBP8.69□□□□□ -1.02
NDL1YLR254C YPR097WQ06839 1073 aa8.68□□□□□ -1.02
NDL1YLR254C UGA3P26370 528 aa8.67□□□□□ -1.02
NDL1YLR254C GLN1P32288 370 aaKnown RBP8.66□□□□□ -1.02
NDL1YLR254C IXR1P33417 597 aa8.66□□□□□ -1.02
NDL1YLR254C ESS1P22696 170 aa8.65□□□□□ -1.02
NDL1YLR254C MSB3P48566 633 aaPredicted RBP8.65□□□□□ -1.02
NDL1YLR254C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
NDL1YLR254C GLC3P32775 704 aa8.63□□□□□ -1.03
NDL1YLR254C SRF1Q12516 437 aa8.63□□□□□ -1.03
NDL1YLR254C TYW1Q08960 810 aaKnown RBP8.62□□□□□ -1.03
NDL1YLR254C YNR021WP53723 404 aaKnown RBP8.6□□□□□ -1.03
NDL1YLR254C YDL176WQ12027 708 aa8.6□□□□□ -1.03
NDL1YLR254C YJU3P28321 313 aa8.59□□□□□ -1.03
NDL1YLR254C PTK2P47116 818 aaKnown RBP8.59□□□□□ -1.03
NDL1YLR254C MRT4P33201 236 aaKnown RBP8.54□□□□□ -1.04
NDL1YLR254C YLR346CQ06139 101 aa8.54□□□□□ -1.04
NDL1YLR254C OPT2Q06593 877 aa8.54□□□□□ -1.04
NDL1YLR254C CAF120P53836 1060 aa8.53□□□□□ -1.04
NDL1YLR254C PKH3Q03306 898 aaPredicted RBP8.52□□□□□ -1.05
NDL1YLR254C VAC17P25591 423 aa8.5□□□□□ -1.05
NDL1YLR254C ARG8P18544 423 aa8.49□□□□□ -1.05
NDL1YLR254C KTR1P27810 393 aaKnown RBP8.49□□□□□ -1.05
NDL1YLR254C RSC30P38781 883 aa8.49□□□□□ -1.05
NDL1YLR254C ITT1Q04638 464 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms