RNA–Protein interactions for RNA: YLR243W

GPN3, Transcript of Putative GTPase with a role in biogenesis of RNA pol II and polIII, yeastyeast

Gene GPN3, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GPN3YLR243W TY1A-PR2P0CX60 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-DR5P0CX65 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-ER2P0CX66 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-GR3P0CX67 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-LR1P0CX68 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-MR2P0CX69 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-JR2P47099 440 aa8.05□□□□□ -1.12
GPN3YLR243W FPK1P53739 893 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-DR1Q03856 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-ML1Q04706 440 aaKnown RBP8.05□□□□□ -1.12
GPN3YLR243W BUD20Q08004 166 aaPredicted RBP8.05□□□□□ -1.12
GPN3YLR243W TY1A-BRQ12217 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-NL2Q12470 440 aa8.05□□□□□ -1.12
GPN3YLR243W TY1A-GR2Q12485 440 aa8.05□□□□□ -1.12
GPN3YLR243W KEX2P13134 814 aa8.04□□□□□ -1.12
GPN3YLR243W SIT4P20604 311 aa8.03□□□□□ -1.12
GPN3YLR243W KTR1P27810 393 aaKnown RBP8.03□□□□□ -1.12
GPN3YLR243W SCJ1P25303 377 aa8.02□□□□□ -1.13
GPN3YLR243W TYW1Q08960 810 aaKnown RBP8.02□□□□□ -1.13
GPN3YLR243W SEC2P17065 759 aa8.01□□□□□ -1.13
GPN3YLR243W XDJ1P39102 459 aa8.01□□□□□ -1.13
GPN3YLR243W GUA1P38625 525 aaKnown RBP8□□□□□ -1.13
GPN3YLR243W NPL4P33755 580 aa7.98□□□□□ -1.13
GPN3YLR243W YMR196WQ04336 1088 aa7.98□□□□□ -1.13
GPN3YLR243W HST2P53686 357 aa7.97□□□□□ -1.13
GPN3YLR243W GCD11P32481 527 aaKnown RBP7.96□□□□□ -1.14
GPN3YLR243W ESS1P22696 170 aa7.95□□□□□ -1.14
GPN3YLR243W CSN12P47130 423 aa7.95□□□□□ -1.14
GPN3YLR243W YNL115CP53925 644 aa7.95□□□□□ -1.14
GPN3YLR243W PRT1P06103 763 aaKnown RBP7.94□□□□□ -1.14
GPN3YLR243W AGE1Q04412 482 aa7.94□□□□□ -1.14
GPN3YLR243W YJU3P28321 313 aa7.93□□□□□ -1.14
GPN3YLR243W RTF1P53064 558 aa7.93□□□□□ -1.14
GPN3YLR243W MMP1Q12372 583 aa7.93□□□□□ -1.14
GPN3YLR243W SDH2P21801 266 aa7.92□□□□□ -1.14
GPN3YLR243W GLN1P32288 370 aaKnown RBP7.92□□□□□ -1.14
GPN3YLR243W SLY41P22215 453 aa7.91□□□□□ -1.14
GPN3YLR243W GYP1Q08484 637 aa7.91□□□□□ -1.14
GPN3YLR243W RRN7P40992 514 aa7.89□□□□□ -1.15
GPN3YLR243W TUB4P53378 473 aa7.89□□□□□ -1.15
GPN3YLR243W PAC1P39946 494 aaKnown RBP7.88□□□□□ -1.15
GPN3YLR243W PKH3Q03306 898 aaPredicted RBP7.88□□□□□ -1.15
GPN3YLR243W DMA2P53924 522 aa7.86□□□□□ -1.15
GPN3YLR243W SAS4Q04003 481 aa7.86□□□□□ -1.15
GPN3YLR243W TRM1P15565 570 aaKnown RBP7.85□□□□□ -1.15
GPN3YLR243W HPC2Q01448 625 aa7.85□□□□□ -1.15
GPN3YLR243W TFB3Q03290 321 aa7.85□□□□□ -1.15
GPN3YLR243W SSA2P10592 639 aaKnown RBP7.84□□□□□ -1.15
GPN3YLR243W PKC1P24583 1151 aa7.83□□□□□ -1.16
GPN3YLR243W RSC30P38781 883 aa7.83□□□□□ -1.16
GPN3YLR243W RAD59Q12223 238 aa7.83□□□□□ -1.16
GPN3YLR243W DPS1P04802 557 aaKnown RBP7.81□□□□□ -1.16
GPN3YLR243W SPT16P32558 1035 aaKnown RBP7.8□□□□□ -1.16
GPN3YLR243W ARG8P18544 423 aa7.79□□□□□ -1.16
GPN3YLR243W PUS6P53294 404 aa7.79□□□□□ -1.16
GPN3YLR243W YDL206WQ12424 762 aa7.79□□□□□ -1.16
GPN3YLR243W CST6P40535 587 aa7.77□□□□□ -1.17
GPN3YLR243W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
GPN3YLR243W LAM6Q08001 693 aa7.77□□□□□ -1.17
GPN3YLR243W MRF1P30775 413 aaPredicted RBP7.76□□□□□ -1.17
GPN3YLR243W TBF1Q02457 562 aa7.76□□□□□ -1.17
GPN3YLR243W PDC1P06169 563 aaKnown RBP7.75□□□□□ -1.17
GPN3YLR243W MOD5P07884 428 aa7.75□□□□□ -1.17
GPN3YLR243W RAS1P01119 309 aa7.74□□□□□ -1.17
GPN3YLR243W BRL1P38770 471 aa7.74□□□□□ -1.17
GPN3YLR243W PAT1P25644 796 aaKnown RBP7.73□□□□□ -1.17
GPN3YLR243W RPA14P50106 137 aa7.72□□□□□ -1.17
GPN3YLR243W ERG12P07277 443 aa7.71□□□□□ -1.18
GPN3YLR243W AMS1P22855 1083 aa7.71□□□□□ -1.18
GPN3YLR243W YEL077CQ3E7X8 1277 aa7.71□□□□□ -1.18
GPN3YLR243W BIO2P32451 375 aa7.7□□□□□ -1.18
GPN3YLR243W BDP1P46678 594 aa7.7□□□□□ -1.18
GPN3YLR243W YPR097WQ06839 1073 aa7.7□□□□□ -1.18
GPN3YLR243W FRK1Q03002 865 aaPredicted RBP7.69□□□□□ -1.18
GPN3YLR243W YBL036CP38197 257 aa7.68□□□□□ -1.18
GPN3YLR243W RRD1P40454 393 aaKnown RBP7.68□□□□□ -1.18
GPN3YLR243W HXT10P43581 546 aa7.68□□□□□ -1.18
GPN3YLR243W KXD1P53158 218 aa7.68□□□□□ -1.18
GPN3YLR243W ALR1Q08269 859 aa7.68□□□□□ -1.18
GPN3YLR243W MAK16P10962 306 aaPredicted RBP7.67□□□□□ -1.18
GPN3YLR243W PUS5Q06244 254 aa7.67□□□□□ -1.18
GPN3YLR243W TPD3P31383 635 aa7.66□□□□□ -1.18
GPN3YLR243W CLA4P48562 842 aa7.66□□□□□ -1.18
GPN3YLR243W YJL007CP47080 104 aa7.64□□□□□ -1.19
GPN3YLR243W ATG32P40458 529 aa7.63□□□□□ -1.19
GPN3YLR243W YDJ1P25491 409 aaKnown RBP7.62□□□□□ -1.19
GPN3YLR243W BIM1P40013 344 aa7.62□□□□□ -1.19
GPN3YLR243W ITT1Q04638 464 aa7.62□□□□□ -1.19
GPN3YLR243W CSE4P36012 229 aa7.61□□□□□ -1.19
GPN3YLR243W FIG4P42837 879 aa7.61□□□□□ -1.19
GPN3YLR243W AIR1P40507 360 aaKnown RBP7.59□□□□□ -1.19
GPN3YLR243W HGH1P48362 394 aaKnown RBP7.59□□□□□ -1.19
GPN3YLR243W YNL108CP53929 270 aa7.59□□□□□ -1.19
GPN3YLR243W SRC1Q03707 834 aa7.59□□□□□ -1.19
GPN3YLR243W VAC17P25591 423 aa7.58□□□□□ -1.2
GPN3YLR243W YPR084WQ06821 456 aa7.58□□□□□ -1.2
GPN3YLR243W ENO2P00925 437 aaKnown RBP7.56□□□□□ -1.2
GPN3YLR243W SUP45P12385 437 aaKnown RBP7.56□□□□□ -1.2
GPN3YLR243W TIF1P10081 395 aaKnown RBP7.55□□□□□ -1.2
GPN3YLR243W TEC1P18412 486 aa7.55□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms