RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C YNR021WP53723 404 aaKnown RBP11.37□□□□□ -0.59
SKG1YKR100C MDS3P53094 1487 aa11.35□□□□□ -0.59
SKG1YKR100C TY1A-DR4O74302 440 aa11.34□□□□□ -0.59
SKG1YKR100C LEU3P08638 886 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-HP0C2I4 478 aaKnown RBP11.34□□□□□ -0.59
SKG1YKR100C TY1A-AP0CX57 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-PR1P0CX58 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-ORP0CX59 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-PR2P0CX60 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-DR5P0CX65 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-ER2P0CX66 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-GR3P0CX67 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-LR1P0CX68 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-MR2P0CX69 440 aa11.34□□□□□ -0.59
SKG1YKR100C GCD11P32481 527 aaKnown RBP11.34□□□□□ -0.59
SKG1YKR100C GLC3P32775 704 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-JR2P47099 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-DR1Q03856 440 aa11.34□□□□□ -0.59
SKG1YKR100C SAS4Q04003 481 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-ML1Q04706 440 aaKnown RBP11.34□□□□□ -0.59
SKG1YKR100C TY1A-BRQ12217 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-NL2Q12470 440 aa11.34□□□□□ -0.59
SKG1YKR100C TY1A-GR2Q12485 440 aa11.34□□□□□ -0.59
SKG1YKR100C SEC2P17065 759 aa11.32□□□□□ -0.6
SKG1YKR100C ATF2P53296 535 aa11.31□□□□□ -0.6
SKG1YKR100C THO2P53552 1597 aaKnown RBP11.31□□□□□ -0.6
SKG1YKR100C KEX2P13134 814 aa11.3□□□□□ -0.6
SKG1YKR100C ERF2Q06551 359 aa11.3□□□□□ -0.6
SKG1YKR100C BUD4P47136 1447 aa11.29□□□□□ -0.6
SKG1YKR100C NIS1P53939 407 aa11.29□□□□□ -0.6
SKG1YKR100C DPS1P04802 557 aaKnown RBP11.28□□□□□ -0.6
SKG1YKR100C SDH2P21801 266 aa11.26□□□□□ -0.61
SKG1YKR100C SIT4P20604 311 aa11.25□□□□□ -0.61
SKG1YKR100C SPT6P23615 1451 aaKnown RBP11.22□□□□□ -0.61
SKG1YKR100C FPK1P53739 893 aa11.22□□□□□ -0.61
SKG1YKR100C AIM7Q12156 149 aa11.21□□□□□ -0.61
SKG1YKR100C BPT1P14772 1559 aa11.2□□□□□ -0.62
SKG1YKR100C HSL1P34244 1518 aa11.2□□□□□ -0.62
SKG1YKR100C RTF1P53064 558 aa11.2□□□□□ -0.62
SKG1YKR100C YNL115CP53925 644 aa11.2□□□□□ -0.62
SKG1YKR100C RRN7P40992 514 aa11.19□□□□□ -0.62
SKG1YKR100C RAS1P01119 309 aa11.18□□□□□ -0.62
SKG1YKR100C MRF1P30775 413 aaPredicted RBP11.18□□□□□ -0.62
SKG1YKR100C SPT16P32558 1035 aaKnown RBP11.18□□□□□ -0.62
SKG1YKR100C YMR196WQ04336 1088 aa11.18□□□□□ -0.62
SKG1YKR100C AMS1P22855 1083 aa11.15□□□□□ -0.62
SKG1YKR100C RPN1P38764 993 aaKnown RBP11.13□□□□□ -0.63
SKG1YKR100C AGE1Q04412 482 aa11.13□□□□□ -0.63
SKG1YKR100C YEL077CQ3E7X8 1277 aa11.13□□□□□ -0.63
SKG1YKR100C PEP1P32319 1579 aa11.12□□□□□ -0.63
SKG1YKR100C ERG12P07277 443 aa11.12□□□□□ -0.63
SKG1YKR100C PAT1P25644 796 aaKnown RBP11.12□□□□□ -0.63
SKG1YKR100C TUB4P53378 473 aa11.12□□□□□ -0.63
SKG1YKR100C SCJ1P25303 377 aa11.11□□□□□ -0.63
SKG1YKR100C HST2P53686 357 aa11.11□□□□□ -0.63
SKG1YKR100C SLY41P22215 453 aa11.1□□□□□ -0.63
SKG1YKR100C PAC1P39946 494 aaKnown RBP11.1□□□□□ -0.63
SKG1YKR100C KIN1P13185 1064 aa11.07□□□□□ -0.64
SKG1YKR100C TYW1Q08960 810 aaKnown RBP11.06□□□□□ -0.64
SKG1YKR100C MMP1Q12372 583 aa11.06□□□□□ -0.64
SKG1YKR100C GLN1P32288 370 aaKnown RBP11.05□□□□□ -0.64
SKG1YKR100C CST6P40535 587 aa11.05□□□□□ -0.64
SKG1YKR100C BNI1P41832 1953 aa11.04□□□□□ -0.64
SKG1YKR100C ESS1P22696 170 aa11.02□□□□□ -0.65
SKG1YKR100C KTR1P27810 393 aaKnown RBP11.01□□□□□ -0.65
SKG1YKR100C HIR3P47171 1648 aa11□□□□□ -0.65
SKG1YKR100C LAM6Q08001 693 aa11□□□□□ -0.65
SKG1YKR100C CSN12P47130 423 aa10.99□□□□□ -0.65
SKG1YKR100C FRK1Q03002 865 aaPredicted RBP10.99□□□□□ -0.65
SKG1YKR100C SRC1Q03707 834 aa10.99□□□□□ -0.65
SKG1YKR100C MYO2P19524 1574 aaKnown RBP10.99□□□□□ -0.65
SKG1YKR100C BDP1P46678 594 aa10.98□□□□□ -0.65
SKG1YKR100C MOD5P07884 428 aa10.97□□□□□ -0.65
SKG1YKR100C PUS6P53294 404 aa10.97□□□□□ -0.65
SKG1YKR100C TRM1P15565 570 aaKnown RBP10.96□□□□□ -0.65
SKG1YKR100C YJU3P28321 313 aa10.96□□□□□ -0.65
SKG1YKR100C YCF1P39109 1515 aaKnown RBP10.95□□□□□ -0.66
SKG1YKR100C BUB1P41695 1021 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
SKG1YKR100C TBF1Q02457 562 aa10.93□□□□□ -0.66
SKG1YKR100C KXD1P53158 218 aa10.92□□□□□ -0.66
SKG1YKR100C PKH3Q03306 898 aaPredicted RBP10.92□□□□□ -0.66
SKG1YKR100C CLA4P48562 842 aa10.91□□□□□ -0.66
SKG1YKR100C YDL206WQ12424 762 aa10.91□□□□□ -0.66
SKG1YKR100C PDC1P06169 563 aaKnown RBP10.9□□□□□ -0.66
SKG1YKR100C LTE1P07866 1435 aa10.9□□□□□ -0.66
SKG1YKR100C GUA1P38625 525 aaKnown RBP10.88□□□□□ -0.67
SKG1YKR100C RPA14P50106 137 aa10.88□□□□□ -0.67
SKG1YKR100C IRC20Q06554 1556 aa10.87□□□□□ -0.67
SKG1YKR100C RSC30P38781 883 aa10.87□□□□□ -0.67
SKG1YKR100C HXT10P43581 546 aa10.87□□□□□ -0.67
SKG1YKR100C DNF1P32660 1571 aa10.86□□□□□ -0.67
SKG1YKR100C TAF2P23255 1407 aa10.86□□□□□ -0.67
SKG1YKR100C TPD3P31383 635 aa10.86□□□□□ -0.67
SKG1YKR100C AIR1P40507 360 aaKnown RBP10.86□□□□□ -0.67
SKG1YKR100C PUS5Q06244 254 aa10.86□□□□□ -0.67
SKG1YKR100C YPR097WQ06839 1073 aa10.85□□□□□ -0.67
SKG1YKR100C ALR1Q08269 859 aa10.85□□□□□ -0.67
SKG1YKR100C SSA2P10592 639 aaKnown RBP10.84□□□□□ -0.67
SKG1YKR100C TRK1P12685 1235 aa10.84□□□□□ -0.67
SKG1YKR100C ARG8P18544 423 aa10.84□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms