RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	SPT16	P32558	1035 aa	Known RBP	5.73	□□□□□ -1.49
SPE1	YKL184W	AIM7	Q12156	149 aa		5.72	□□□□□ -1.49
SPE1	YKL184W	ERG12	P07277	443 aa		5.7	□□□□□ -1.5
SPE1	YKL184W	KEX2	P13134	814 aa		5.7	□□□□□ -1.5
SPE1	YKL184W	RPN1	P38764	993 aa	Known RBP	5.7	□□□□□ -1.5
SPE1	YKL184W	RTF1	P53064	558 aa		5.7	□□□□□ -1.5
SPE1	YKL184W	NIS1	P53939	407 aa		5.7	□□□□□ -1.5
SPE1	YKL184W	YNL115C	P53925	644 aa		5.69	□□□□□ -1.5
SPE1	YKL184W	YEL077C	Q3E7X8	1277 aa		5.69	□□□□□ -1.5
SPE1	YKL184W	SEC2	P17065	759 aa		5.67	□□□□□ -1.5
SPE1	YKL184W	SIT4	P20604	311 aa		5.67	□□□□□ -1.5
SPE1	YKL184W	RRN7	P40992	514 aa		5.67	□□□□□ -1.5
SPE1	YKL184W	FPK1	P53739	893 aa		5.67	□□□□□ -1.5
SPE1	YKL184W	TY1A-DR4	O74302	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-H	P0C2I4	478 aa	Known RBP	5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-A	P0CX57	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-PR1	P0CX58	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-OR	P0CX59	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-PR2	P0CX60	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-DR5	P0CX65	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-ER2	P0CX66	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-GR3	P0CX67	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-LR1	P0CX68	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-MR2	P0CX69	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-JR2	P47099	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-DR1	Q03856	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-ML1	Q04706	440 aa	Known RBP	5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-BR	Q12217	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-NL2	Q12470	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	TY1A-GR2	Q12485	440 aa		5.66	□□□□□ -1.5
SPE1	YKL184W	SLY41	P22215	453 aa		5.65	□□□□□ -1.5
SPE1	YKL184W	AMS1	P22855	1083 aa		5.65	□□□□□ -1.51
SPE1	YKL184W	GLN1	P32288	370 aa	Known RBP	5.65	□□□□□ -1.51
SPE1	YKL184W	ERF2	Q06551	359 aa		5.65	□□□□□ -1.51
SPE1	YKL184W	MMP1	Q12372	583 aa		5.64	□□□□□ -1.51
SPE1	YKL184W	KIN1	P13185	1064 aa		5.63	□□□□□ -1.51
SPE1	YKL184W	HST2	P53686	357 aa		5.63	□□□□□ -1.51
SPE1	YKL184W	TUB4	P53378	473 aa		5.62	□□□□□ -1.51
SPE1	YKL184W	TBF1	Q02457	562 aa		5.62	□□□□□ -1.51
SPE1	YKL184W	CSN12	P47130	423 aa		5.61	□□□□□ -1.51
SPE1	YKL184W	RAS1	P01119	309 aa		5.6	□□□□□ -1.51
SPE1	YKL184W	SDH2	P21801	266 aa		5.59	□□□□□ -1.51
SPE1	YKL184W	SCJ1	P25303	377 aa		5.59	□□□□□ -1.51
SPE1	YKL184W	KXD1	P53158	218 aa		5.59	□□□□□ -1.51
SPE1	YKL184W	PUS6	P53294	404 aa		5.59	□□□□□ -1.51
SPE1	YKL184W	SSA2	P10592	639 aa	Known RBP	5.58	□□□□□ -1.52
SPE1	YKL184W	PAC1	P39946	494 aa	Known RBP	5.58	□□□□□ -1.52
SPE1	YKL184W	ESS1	P22696	170 aa		5.57	□□□□□ -1.52
SPE1	YKL184W	FRK1	Q03002	865 aa	Predicted RBP	5.57	□□□□□ -1.52
SPE1	YKL184W	AGE1	Q04412	482 aa		5.57	□□□□□ -1.52
SPE1	YKL184W	TYW1	Q08960	810 aa	Known RBP	5.57	□□□□□ -1.52
SPE1	YKL184W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.57	□□□□□ -1.52	not detected
SPE1	YKL184W	BDP1	P46678	594 aa		5.56	□□□□□ -1.52
SPE1	YKL184W	PKH3	Q03306	898 aa	Predicted RBP	5.56	□□□□□ -1.52
SPE1	YKL184W	ALR1	Q08269	859 aa		5.56	□□□□□ -1.52
SPE1	YKL184W	CST6	P40535	587 aa		5.55	□□□□□ -1.52
SPE1	YKL184W	LAM6	Q08001	693 aa		5.55	□□□□□ -1.52
SPE1	YKL184W	TRM1	P15565	570 aa	Known RBP	5.54	□□□□□ -1.52
SPE1	YKL184W	ARG8	P18544	423 aa		5.54	□□□□□ -1.52
SPE1	YKL184W	YDL206W	Q12424	762 aa		5.54	□□□□□ -1.52
SPE1	YKL184W	HXT10	P43581	546 aa		5.53	□□□□□ -1.52
SPE1	YKL184W	RPA14	P50106	137 aa		5.53	□□□□□ -1.52
SPE1	YKL184W	YJU3	P28321	313 aa		5.52	□□□□□ -1.53
SPE1	YKL184W	LEO1	P38439	464 aa		5.52	□□□□□ -1.53
SPE1	YKL184W	MOD5	P07884	428 aa		5.51	□□□□□ -1.53
SPE1	YKL184W	TRK1	P12685	1235 aa		5.51	□□□□□ -1.53
SPE1	YKL184W	KTR1	P27810	393 aa	Known RBP	5.51	□□□□□ -1.53
SPE1	YKL184W	YPR097W	Q06839	1073 aa		5.51	□□□□□ -1.53
SPE1	YKL184W	GUA1	P38625	525 aa	Known RBP	5.5	□□□□□ -1.53
SPE1	YKL184W	HED1	Q03937	162 aa		5.5	□□□□□ -1.53
SPE1	YKL184W	PDC1	P06169	563 aa	Known RBP	5.49	□□□□□ -1.53
SPE1	YKL184W	TPD3	P31383	635 aa		5.49	□□□□□ -1.53
SPE1	YKL184W	RRD1	P40454	393 aa	Known RBP	5.48	□□□□□ -1.53
SPE1	YKL184W	RAD59	Q12223	238 aa		5.48	□□□□□ -1.53
SPE1	YKL184W	KIP2	P28743	706 aa		5.48	□□□□□ -1.53
SPE1	YKL184W	BRL1	P38770	471 aa		5.48	□□□□□ -1.53
SPE1	YKL184W	HGH1	P48362	394 aa	Known RBP	5.48	□□□□□ -1.53
SPE1	YKL184W	HPC2	Q01448	625 aa		5.48	□□□□□ -1.53
SPE1	YKL184W	SYH1	Q02875	849 aa	Known RBP	5.48	□□□□□ -1.53
SPE1	YKL184W	PUS5	Q06244	254 aa		5.48	□□□□□ -1.53
SPE1	YKL184W	RSC30	P38781	883 aa		5.47	□□□□□ -1.53
SPE1	YKL184W	SRC1	Q03707	834 aa		5.47	□□□□□ -1.53
SPE1	YKL184W	CDC4	P07834	779 aa		5.46	□□□□□ -1.54
SPE1	YKL184W	GCR2	Q01722	534 aa		5.46	□□□□□ -1.54
SPE1	YKL184W	AIR1	P40507	360 aa	Known RBP	5.45	□□□□□ -1.54
SPE1	YKL184W	IXR1	P33417	597 aa		5.44	□□□□□ -1.54
SPE1	YKL184W	CLA4	P48562	842 aa		5.44	□□□□□ -1.54
SPE1	YKL184W	HST3	P53687	447 aa		5.43	□□□□□ -1.54
SPE1	YKL184W	CSE4	P36012	229 aa		5.41	□□□□□ -1.54
SPE1	YKL184W	YBL036C	P38197	257 aa		5.41	□□□□□ -1.54
SPE1	YKL184W	TFB3	Q03290	321 aa		5.4	□□□□□ -1.54
SPE1	YKL184W	ASH1	P34233	588 aa		5.4	□□□□□ -1.55
SPE1	YKL184W	VAC17	P25591	423 aa		5.39	□□□□□ -1.55
SPE1	YKL184W	BRE2	P43132	505 aa		5.39	□□□□□ -1.55
SPE1	YKL184W	MAK16	P10962	306 aa	Predicted RBP	5.38	□□□□□ -1.55
SPE1	YKL184W	AFT1	P22149	690 aa		5.38	□□□□□ -1.55
SPE1	YKL184W	MET32	Q12041	191 aa		5.38	□□□□□ -1.55
SPE1	YKL184W	TEC1	P18412	486 aa		5.37	□□□□□ -1.55
SPE1	YKL184W	UGA3	P26370	528 aa		5.37	□□□□□ -1.55
SPE1	YKL184W	NAF1	P53919	492 aa	Known RBP	5.36	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms