RNA–Protein interactions for RNA: YKL119C

VPH2, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VPH2, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPH2YKL119C TY1A-DR1Q03856 440 aa7.1□□□□□ -1.27
VPH2YKL119C TY1A-ML1Q04706 440 aaKnown RBP7.1□□□□□ -1.27
VPH2YKL119C TY1A-BRQ12217 440 aa7.1□□□□□ -1.27
VPH2YKL119C TY1A-NL2Q12470 440 aa7.1□□□□□ -1.27
VPH2YKL119C TY1A-GR2Q12485 440 aa7.1□□□□□ -1.27
VPH2YKL119C TRK1P12685 1235 aa7.09□□□□□ -1.27
VPH2YKL119C SEC2P17065 759 aa7.08□□□□□ -1.28
VPH2YKL119C ERG12P07277 443 aa7.07□□□□□ -1.28
VPH2YKL119C CST6P40535 587 aa7.05□□□□□ -1.28
VPH2YKL119C SPT16P32558 1035 aaKnown RBP7.04□□□□□ -1.28
VPH2YKL119C RRN7P40992 514 aa7.04□□□□□ -1.28
VPH2YKL119C KEX2P13134 814 aa7.03□□□□□ -1.28
VPH2YKL119C MAM3Q12296 706 aa7.03□□□□□ -1.28
VPH2YKL119C ERF2Q06551 359 aa7.02□□□□□ -1.29
VPH2YKL119C PSE1P32337 1089 aaKnown RBP7.01□□□□□ -1.29
VPH2YKL119C SAS10Q12136 610 aaPredicted RBP7.01□□□□□ -1.29
VPH2YKL119C IES2P40154 320 aa7□□□□□ -1.29
VPH2YKL119C CLA4P48562 842 aa7□□□□□ -1.29
VPH2YKL119C FRK1Q03002 865 aaPredicted RBP7□□□□□ -1.29
VPH2YKL119C AIR1P40507 360 aaKnown RBP6.99□□□□□ -1.29
VPH2YKL119C LAM6Q08001 693 aa6.99□□□□□ -1.29
VPH2YKL119C DSF2P38213 736 aa6.97□□□□□ -1.29
VPH2YKL119C PAT1P25644 796 aaKnown RBP6.96□□□□□ -1.3
VPH2YKL119C BDP1P46678 594 aa6.95□□□□□ -1.3
VPH2YKL119C SPB4P25808 606 aaPredicted RBP6.93□□□□□ -1.3
VPH2YKL119C CLB5P30283 435 aa6.93□□□□□ -1.3
VPH2YKL119C NUP42P49686 430 aaKnown RBP6.93□□□□□ -1.3
VPH2YKL119C PAC1P39946 494 aaKnown RBP6.92□□□□□ -1.3
VPH2YKL119C DIT2P21595 489 aa6.89□□□□□ -1.31
VPH2YKL119C BRE2P43132 505 aa6.89□□□□□ -1.31
VPH2YKL119C TEA1P47988 759 aa6.89□□□□□ -1.31
VPH2YKL119C TUB4P53378 473 aa6.89□□□□□ -1.31
VPH2YKL119C AGE1Q04412 482 aa6.89□□□□□ -1.31
VPH2YKL119C YNL115CP53925 644 aa6.86□□□□□ -1.31
VPH2YKL119C NIS1P53939 407 aa6.86□□□□□ -1.31
VPH2YKL119C CDC4P07834 779 aa6.85□□□□□ -1.31
VPH2YKL119C RGA1P39083 1007 aa6.85□□□□□ -1.31
VPH2YKL119C RTF1P53064 558 aa6.85□□□□□ -1.31
VPH2YKL119C HED1Q03937 162 aa6.84□□□□□ -1.31
VPH2YKL119C PUS5Q06244 254 aa6.84□□□□□ -1.31
VPH2YKL119C MOD5P07884 428 aa6.83□□□□□ -1.32
VPH2YKL119C SIT4P20604 311 aa6.83□□□□□ -1.32
VPH2YKL119C GCR2Q01722 534 aa6.83□□□□□ -1.32
VPH2YKL119C SLY41P22215 453 aa6.79□□□□□ -1.32
VPH2YKL119C FPK1P53739 893 aa6.79□□□□□ -1.32
VPH2YKL119C YMR196WQ04336 1088 aa6.79□□□□□ -1.32
VPH2YKL119C GAR1P28007 205 aaKnown RBP6.78□□□□□ -1.32
VPH2YKL119C MET32Q12041 191 aa6.78□□□□□ -1.32
VPH2YKL119C KXD1P53158 218 aa6.76□□□□□ -1.33
VPH2YKL119C ASH1P34233 588 aa6.75□□□□□ -1.33
VPH2YKL119C RGA2Q06407 1009 aa6.75□□□□□ -1.33
VPH2YKL119C SCJ1P25303 377 aa6.74□□□□□ -1.33
VPH2YKL119C PDC1P06169 563 aaKnown RBP6.73□□□□□ -1.33
VPH2YKL119C GBP2P25555 427 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
VPH2YKL119C RRD1P40454 393 aaKnown RBP6.72□□□□□ -1.33
VPH2YKL119C HXT10P43581 546 aa6.72□□□□□ -1.33
VPH2YKL119C HST3P53687 447 aa6.72□□□□□ -1.33
VPH2YKL119C YPL062WQ02781 134 aa6.72□□□□□ -1.33
VPH2YKL119C ATF2P53296 535 aa6.71□□□□□ -1.34
VPH2YKL119C TBF1Q02457 562 aa6.71□□□□□ -1.34
VPH2YKL119C YDL206WQ12424 762 aa6.71□□□□□ -1.34
VPH2YKL119C AFT1P22149 690 aa6.7□□□□□ -1.34
VPH2YKL119C MET22P32179 357 aa6.7□□□□□ -1.34
VPH2YKL119C TPD3P31383 635 aa6.69□□□□□ -1.34
VPH2YKL119C GLC3P32775 704 aa6.69□□□□□ -1.34
VPH2YKL119C PUS6P53294 404 aa6.69□□□□□ -1.34
VPH2YKL119C HST2P53686 357 aa6.69□□□□□ -1.34
VPH2YKL119C TRM1P15565 570 aaKnown RBP6.68□□□□□ -1.34
VPH2YKL119C MMP1Q12372 583 aa6.68□□□□□ -1.34
VPH2YKL119C SYH1Q02875 849 aaKnown RBP6.67□□□□□ -1.34
VPH2YKL119C ALR1Q08269 859 aa6.67□□□□□ -1.34
VPH2YKL119C ENV9Q08651 330 aa6.67□□□□□ -1.34
VPH2YKL119C ESS1P22696 170 aa6.66□□□□□ -1.34
VPH2YKL119C RPA14P50106 137 aa6.66□□□□□ -1.34
VPH2YKL119C GLN1P32288 370 aaKnown RBP6.65□□□□□ -1.34
VPH2YKL119C YJR115WP47152 169 aa6.65□□□□□ -1.34
VPH2YKL119C YNR021WP53723 404 aaKnown RBP6.65□□□□□ -1.34
VPH2YKL119C YDR444WQ04093 687 aa6.65□□□□□ -1.34
VPH2YKL119C KIP2P28743 706 aa6.64□□□□□ -1.35
VPH2YKL119C YPR097WQ06839 1073 aa6.64□□□□□ -1.35
VPH2YKL119C TYW1Q08960 810 aaKnown RBP6.64□□□□□ -1.35
VPH2YKL119C YJU3P28321 313 aa6.62□□□□□ -1.35
VPH2YKL119C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
VPH2YKL119C LCB5Q06147 687 aaKnown RBP6.61□□□□□ -1.35
VPH2YKL119C IXR1P33417 597 aa6.6□□□□□ -1.35
VPH2YKL119C UGA3P26370 528 aa6.59□□□□□ -1.35
VPH2YKL119C MSB3P48566 633 aaPredicted RBP6.59□□□□□ -1.35
VPH2YKL119C KTR1P27810 393 aaKnown RBP6.57□□□□□ -1.36
VPH2YKL119C PKH3Q03306 898 aaPredicted RBP6.56□□□□□ -1.36
VPH2YKL119C PTK2P47116 818 aaKnown RBP6.54□□□□□ -1.36
VPH2YKL119C SRF1Q12516 437 aa6.54□□□□□ -1.36
VPH2YKL119C MRT4P33201 236 aaKnown RBP6.53□□□□□ -1.36
VPH2YKL119C RSC30P38781 883 aa6.53□□□□□ -1.36
VPH2YKL119C ITT1Q04638 464 aa6.53□□□□□ -1.36
VPH2YKL119C YDL176WQ12027 708 aa6.53□□□□□ -1.36
VPH2YKL119C AIM7Q12156 149 aa6.53□□□□□ -1.36
VPH2YKL119C ARG8P18544 423 aa6.52□□□□□ -1.37
VPH2YKL119C VAC17P25591 423 aa6.51□□□□□ -1.37
VPH2YKL119C CSN12P47130 423 aa6.51□□□□□ -1.37
VPH2YKL119C OPT2Q06593 877 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms