RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W VRP1P37370 817 aa6.84□□□□□ -1.31
MSN4YKL062W HST2P53686 357 aa6.83□□□□□ -1.32
MSN4YKL062W KEX2P13134 814 aa6.83□□□□□ -1.32
MSN4YKL062W GCD11P32481 527 aaKnown RBP6.83□□□□□ -1.32
MSN4YKL062W TYW1Q08960 810 aaKnown RBP6.83□□□□□ -1.32
MSN4YKL062W GLN1P32288 370 aaKnown RBP6.82□□□□□ -1.32
MSN4YKL062W RTF1P53064 558 aa6.82□□□□□ -1.32
MSN4YKL062W YNL115CP53925 644 aa6.82□□□□□ -1.32
MSN4YKL062W BCK2P33306 851 aa6.81□□□□□ -1.32
MSN4YKL062W ERF2Q06551 359 aa6.81□□□□□ -1.32
MSN4YKL062W MMP1Q12372 583 aa6.81□□□□□ -1.32
MSN4YKL062W SCJ1P25303 377 aa6.81□□□□□ -1.32
MSN4YKL062W PRT1P06103 763 aaKnown RBP6.8□□□□□ -1.32
MSN4YKL062W KTR1P27810 393 aaKnown RBP6.8□□□□□ -1.32
MSN4YKL062W SSA2P10592 639 aaKnown RBP6.79□□□□□ -1.32
MSN4YKL062W SEC2P17065 759 aa6.79□□□□□ -1.32
MSN4YKL062W SLY41P22215 453 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-DR4O74302 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-HP0C2I4 478 aaKnown RBP6.79□□□□□ -1.32
MSN4YKL062W TY1A-AP0CX57 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-PR1P0CX58 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-ORP0CX59 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-PR2P0CX60 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-DR5P0CX65 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-ER2P0CX66 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-GR3P0CX67 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-LR1P0CX68 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-MR2P0CX69 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-JR2P47099 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-DR1Q03856 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-ML1Q04706 440 aaKnown RBP6.79□□□□□ -1.32
MSN4YKL062W TY1A-BRQ12217 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-NL2Q12470 440 aa6.79□□□□□ -1.32
MSN4YKL062W TY1A-GR2Q12485 440 aa6.79□□□□□ -1.32
MSN4YKL062W GYP1Q08484 637 aa6.78□□□□□ -1.32
MSN4YKL062W ESS1P22696 170 aa6.77□□□□□ -1.33
MSN4YKL062W HPC2Q01448 625 aa6.77□□□□□ -1.33
MSN4YKL062W SAS4Q04003 481 aa6.76□□□□□ -1.33
MSN4YKL062W DMA2P53924 522 aa6.75□□□□□ -1.33
MSN4YKL062W PKH3Q03306 898 aaPredicted RBP6.74□□□□□ -1.33
MSN4YKL062W YJU3P28321 313 aa6.73□□□□□ -1.33
MSN4YKL062W XDJ1P39102 459 aa6.73□□□□□ -1.33
MSN4YKL062W TUB4P53378 473 aa6.73□□□□□ -1.33
MSN4YKL062W PAT1P25644 796 aaKnown RBP6.72□□□□□ -1.33
MSN4YKL062W SPT16P32558 1035 aaKnown RBP6.72□□□□□ -1.33
MSN4YKL062W TFB3Q03290 321 aa6.72□□□□□ -1.33
MSN4YKL062W BRL1P38770 471 aa6.71□□□□□ -1.34
MSN4YKL062W RRN7P40992 514 aa6.71□□□□□ -1.34
MSN4YKL062W HGH1P48362 394 aaKnown RBP6.71□□□□□ -1.34
MSN4YKL062W PUS6P53294 404 aa6.71□□□□□ -1.34
MSN4YKL062W AGE1Q04412 482 aa6.71□□□□□ -1.34
MSN4YKL062W TRM1P15565 570 aaKnown RBP6.7□□□□□ -1.34
MSN4YKL062W ARG8P18544 423 aa6.7□□□□□ -1.34
MSN4YKL062W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
MSN4YKL062W LAM6Q08001 693 aa6.69□□□□□ -1.34
MSN4YKL062W RAD59Q12223 238 aa6.69□□□□□ -1.34
MSN4YKL062W MRF1P30775 413 aaPredicted RBP6.68□□□□□ -1.34
MSN4YKL062W RSC30P38781 883 aa6.68□□□□□ -1.34
MSN4YKL062W TBF1Q02457 562 aa6.68□□□□□ -1.34
MSN4YKL062W PAC1P39946 494 aaKnown RBP6.67□□□□□ -1.34
MSN4YKL062W PKC1P24583 1151 aa6.66□□□□□ -1.34
MSN4YKL062W ERG12P07277 443 aa6.64□□□□□ -1.35
MSN4YKL062W SDH2P21801 266 aa6.64□□□□□ -1.35
MSN4YKL062W YDL206WQ12424 762 aa6.64□□□□□ -1.35
MSN4YKL062W RPA14P50106 137 aa6.63□□□□□ -1.35
MSN4YKL062W KXD1P53158 218 aa6.63□□□□□ -1.35
MSN4YKL062W YBL036CP38197 257 aa6.62□□□□□ -1.35
MSN4YKL062W ALR1Q08269 859 aa6.62□□□□□ -1.35
MSN4YKL062W YPR097WQ06839 1073 aa6.61□□□□□ -1.35
MSN4YKL062W PDC1P06169 563 aaKnown RBP6.6□□□□□ -1.35
MSN4YKL062W CSE4P36012 229 aa6.6□□□□□ -1.35
MSN4YKL062W MOD5P07884 428 aa6.6□□□□□ -1.35
MSN4YKL062W HXT10P43581 546 aa6.6□□□□□ -1.35
MSN4YKL062W YEL077CQ3E7X8 1277 aa6.6□□□□□ -1.35
MSN4YKL062W MAK16P10962 306 aaPredicted RBP6.58□□□□□ -1.36
MSN4YKL062W YJL007CP47080 104 aa6.58□□□□□ -1.36
MSN4YKL062W AMS1P22855 1083 aa6.57□□□□□ -1.36
MSN4YKL062W TPD3P31383 635 aa6.57□□□□□ -1.36
MSN4YKL062W BDP1P46678 594 aa6.57□□□□□ -1.36
MSN4YKL062W CST6P40535 587 aa6.56□□□□□ -1.36
MSN4YKL062W FRK1Q03002 865 aaPredicted RBP6.56□□□□□ -1.36
MSN4YKL062W RRD1P40454 393 aaKnown RBP6.55□□□□□ -1.36
MSN4YKL062W DPS1P04802 557 aaKnown RBP6.54□□□□□ -1.36
MSN4YKL062W RAS1P01119 309 aa6.53□□□□□ -1.36
MSN4YKL062W BIM1P40013 344 aa6.53□□□□□ -1.36
MSN4YKL062W BIO2P32451 375 aa6.53□□□□□ -1.36
MSN4YKL062W SPT5P27692 1063 aaKnown RBP6.51□□□□□ -1.37
MSN4YKL062W PUS5Q06244 254 aa6.51□□□□□ -1.37
MSN4YKL062W YDJ1P25491 409 aaKnown RBP6.51□□□□□ -1.37
MSN4YKL062W ATG32P40458 529 aa6.51□□□□□ -1.37
MSN4YKL062W NAF1P53919 492 aaKnown RBP6.51□□□□□ -1.37
MSN4YKL062W YNL108CP53929 270 aa6.51□□□□□ -1.37
MSN4YKL062W VAC17P25591 423 aa6.49□□□□□ -1.37
MSN4YKL062W FIG4P42837 879 aa6.49□□□□□ -1.37
MSN4YKL062W SUP45P12385 437 aaKnown RBP6.48□□□□□ -1.37
MSN4YKL062W KIP2P28743 706 aa6.48□□□□□ -1.37
MSN4YKL062W TIF1P10081 395 aaKnown RBP6.47□□□□□ -1.37
MSN4YKL062W TEC1P18412 486 aa6.47□□□□□ -1.37
MSN4YKL062W RPL34BP40525 121 aaKnown RBP6.47□□□□□ -1.37
MSN4YKL062W SYH1Q02875 849 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms