RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C HPC2Q01448 625 aa7.38□□□□□ -1.23
VPS25YJR102C KEX2P13134 814 aa7.37□□□□□ -1.23
VPS25YJR102C CHL1P22516 861 aaPredicted RBP7.37□□□□□ -1.23
VPS25YJR102C KTR1P27810 393 aaKnown RBP7.37□□□□□ -1.23
VPS25YJR102C HST2P53686 357 aa7.37□□□□□ -1.23
VPS25YJR102C TFB3Q03290 321 aa7.37□□□□□ -1.23
VPS25YJR102C ESS1P22696 170 aa7.36□□□□□ -1.23
VPS25YJR102C SIT4P20604 311 aa7.35□□□□□ -1.23
VPS25YJR102C SLY41P22215 453 aa7.35□□□□□ -1.23
VPS25YJR102C PKH3Q03306 898 aaPredicted RBP7.35□□□□□ -1.23
VPS25YJR102C STR2P47164 639 aa7.34□□□□□ -1.23
VPS25YJR102C ISM1P48526 1002 aa7.34□□□□□ -1.23
VPS25YJR102C GCD11P32481 527 aaKnown RBP7.33□□□□□ -1.24
VPS25YJR102C YNL115CP53925 644 aa7.33□□□□□ -1.24
VPS25YJR102C ERF2Q06551 359 aa7.33□□□□□ -1.24
VPS25YJR102C RAM1P22007 431 aa7.31□□□□□ -1.24
VPS25YJR102C RTF1P53064 558 aa7.31□□□□□ -1.24
VPS25YJR102C PKC1P24583 1151 aa7.3□□□□□ -1.24
VPS25YJR102C YJU3P28321 313 aa7.3□□□□□ -1.24
VPS25YJR102C YPR015CQ12531 247 aa7.3□□□□□ -1.24
VPS25YJR102C ARG8P18544 423 aa7.29□□□□□ -1.24
VPS25YJR102C YML082WQ04533 649 aaKnown RBP7.29□□□□□ -1.24
VPS25YJR102C BUD20Q08004 166 aaPredicted RBP7.28□□□□□ -1.24
VPS25YJR102C RAD59Q12223 238 aa7.28□□□□□ -1.24
VPS25YJR102C TBF1Q02457 562 aa7.27□□□□□ -1.25
VPS25YJR102C PRT1P06103 763 aaKnown RBP7.26□□□□□ -1.25
VPS25YJR102C TY1A-DR4O74302 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-HP0C2I4 478 aaKnown RBP7.25□□□□□ -1.25
VPS25YJR102C TY1A-AP0CX57 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-PR1P0CX58 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-ORP0CX59 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-PR2P0CX60 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-DR5P0CX65 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-ER2P0CX66 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-GR3P0CX67 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-LR1P0CX68 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-MR2P0CX69 440 aa7.25□□□□□ -1.25
VPS25YJR102C YBL036CP38197 257 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-JR2P47099 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-DR1Q03856 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-ML1Q04706 440 aaKnown RBP7.25□□□□□ -1.25
VPS25YJR102C GYP1Q08484 637 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-BRQ12217 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-NL2Q12470 440 aa7.25□□□□□ -1.25
VPS25YJR102C TY1A-GR2Q12485 440 aa7.25□□□□□ -1.25
VPS25YJR102C TRM1P15565 570 aaKnown RBP7.24□□□□□ -1.25
VPS25YJR102C SEC2P17065 759 aa7.23□□□□□ -1.25
VPS25YJR102C VRP1P37370 817 aa7.23□□□□□ -1.25
VPS25YJR102C RRN7P40992 514 aa7.23□□□□□ -1.25
VPS25YJR102C YJL007CP47080 104 aa7.23□□□□□ -1.25
VPS25YJR102C PUS6P53294 404 aa7.23□□□□□ -1.25
VPS25YJR102C LAM6Q08001 693 aa7.23□□□□□ -1.25
VPS25YJR102C TUB4P53378 473 aa7.22□□□□□ -1.25
VPS25YJR102C PAT1P25644 796 aaKnown RBP7.21□□□□□ -1.26
VPS25YJR102C SPT16P32558 1035 aaKnown RBP7.2□□□□□ -1.26
VPS25YJR102C YDL206WQ12424 762 aa7.19□□□□□ -1.26
VPS25YJR102C RSC30P38781 883 aa7.18□□□□□ -1.26
VPS25YJR102C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
VPS25YJR102C AGE1Q04412 482 aa7.18□□□□□ -1.26
VPS25YJR102C RLF2Q12495 606 aa7.18□□□□□ -1.26
VPS25YJR102C BCK2P33306 851 aa7.17□□□□□ -1.26
VPS25YJR102C PAC1P39946 494 aaKnown RBP7.17□□□□□ -1.26
VPS25YJR102C BIM1P40013 344 aa7.17□□□□□ -1.26
VPS25YJR102C RPL34BP40525 121 aaKnown RBP7.17□□□□□ -1.26
VPS25YJR102C SAS4Q04003 481 aa7.16□□□□□ -1.26
VPS25YJR102C BIO2P32451 375 aa7.15□□□□□ -1.26
VPS25YJR102C CSE4P36012 229 aa7.15□□□□□ -1.26
VPS25YJR102C ATG32P40458 529 aa7.14□□□□□ -1.27
VPS25YJR102C KXD1P53158 218 aa7.13□□□□□ -1.27
VPS25YJR102C YNL108CP53929 270 aa7.13□□□□□ -1.27
VPS25YJR102C ALR1Q08269 859 aa7.13□□□□□ -1.27
VPS25YJR102C MAK16P10962 306 aaPredicted RBP7.12□□□□□ -1.27
VPS25YJR102C RPA14P50106 137 aa7.12□□□□□ -1.27
VPS25YJR102C MRF1P30775 413 aaPredicted RBP7.11□□□□□ -1.27
VPS25YJR102C ERG12P07277 443 aa7.1□□□□□ -1.27
VPS25YJR102C TIF1P10081 395 aaKnown RBP7.1□□□□□ -1.27
VPS25YJR102C PDC1P06169 563 aaKnown RBP7.09□□□□□ -1.27
VPS25YJR102C YPR097WQ06839 1073 aa7.09□□□□□ -1.27
VPS25YJR102C YDJ1P25491 409 aaKnown RBP7.08□□□□□ -1.28
VPS25YJR102C SPT5P27692 1063 aaKnown RBP7.08□□□□□ -1.28
VPS25YJR102C RTG2P32608 588 aaKnown RBP7.07□□□□□ -1.28
VPS25YJR102C YPR204WQ08995 1032 aa7.07□□□□□ -1.28
VPS25YJR102C HXT10P43581 546 aa7.06□□□□□ -1.28
VPS25YJR102C XDJ1P39102 459 aa7.05□□□□□ -1.28
VPS25YJR102C ENO2P00925 437 aaKnown RBP7.04□□□□□ -1.28
VPS25YJR102C NAF1P53919 492 aaKnown RBP7.04□□□□□ -1.28
VPS25YJR102C FRK1Q03002 865 aaPredicted RBP7.04□□□□□ -1.28
VPS25YJR102C SUP45P12385 437 aaKnown RBP7.03□□□□□ -1.28
VPS25YJR102C SDH2P21801 266 aa7.03□□□□□ -1.28
VPS25YJR102C RRD1P40454 393 aaKnown RBP7.03□□□□□ -1.28
VPS25YJR102C YEL077CQ3E7X8 1277 aa7.03□□□□□ -1.28
VPS25YJR102C TEC1P18412 486 aa7.02□□□□□ -1.29
VPS25YJR102C ISF1P32488 338 aa7.01□□□□□ -1.29
VPS25YJR102C BDP1P46678 594 aa7.01□□□□□ -1.29
VPS25YJR102C MCM16Q12262 181 aa7.01□□□□□ -1.29
VPS25YJR102C MOD5P07884 428 aa7□□□□□ -1.29
VPS25YJR102C CST6P40535 587 aa7□□□□□ -1.29
VPS25YJR102C FIG4P42837 879 aa7□□□□□ -1.29
VPS25YJR102C PUS5Q06244 254 aa7□□□□□ -1.29
VPS25YJR102C KIP2P28743 706 aa6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms