RNA–Protein interactions for RNA: YJL020C

BBC1, Transcript of Protein possibly involved in assembly of actin patches, yeastyeast

Gene BBC1, Length 3,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BBC1YJL020C MET10P39692 1035 aa5.71□□□□□ -1.5
BBC1YJL020C PDR1P12383 1068 aa5.71□□□□□ -1.5
BBC1YJL020C GUA1P38625 525 aaKnown RBP5.71□□□□□ -1.5
BBC1YJL020C YNR021WP53723 404 aaKnown RBP5.71□□□□□ -1.5
BBC1YJL020C GCN2P15442 1659 aa5.7□□□□□ -1.5
BBC1YJL020C MMS1Q06211 1407 aa5.7□□□□□ -1.5
BBC1YJL020C RRN6P32786 894 aa5.7□□□□□ -1.5
BBC1YJL020C LTE1P07866 1435 aa5.7□□□□□ -1.5
BBC1YJL020C TRM3Q07527 1436 aa5.7□□□□□ -1.5
BBC1YJL020C SRB8P25648 1427 aa5.69□□□□□ -1.5
BBC1YJL020C PDR5P33302 1511 aaKnown RBP5.69□□□□□ -1.5
BBC1YJL020C RTT106P40161 455 aa5.68□□□□□ -1.5
BBC1YJL020C RPL17AP05740 184 aaKnown RBP5.68□□□□□ -1.5
BBC1YJL020C RPL17BP46990 184 aaKnown RBP5.68□□□□□ -1.5
BBC1YJL020C MGA2P40578 1113 aa5.68□□□□□ -1.5
BBC1YJL020C AIM7Q12156 149 aa5.68□□□□□ -1.5
BBC1YJL020C UBX5Q06682 500 aa5.67□□□□□ -1.5
BBC1YJL020C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
BBC1YJL020C ZDS1P50111 915 aaKnown RBP5.66□□□□□ -1.5
BBC1YJL020C DOP1Q03921 1698 aa5.66□□□□□ -1.5
BBC1YJL020C YAF9P53930 226 aa5.65□□□□□ -1.5
BBC1YJL020C PSH1Q12161 406 aa5.65□□□□□ -1.51
BBC1YJL020C SSM4P40318 1319 aa5.65□□□□□ -1.51
BBC1YJL020C HIF1Q12373 385 aa5.64□□□□□ -1.51
BBC1YJL020C VPS70P47161 811 aa5.64□□□□□ -1.51
BBC1YJL020C NUP157P40064 1391 aaKnown RBP5.64□□□□□ -1.51
BBC1YJL020C CHC1P22137 1653 aaKnown RBP5.64□□□□□ -1.51
BBC1YJL020C HGH1P48362 394 aaKnown RBP5.64□□□□□ -1.51
BBC1YJL020C ALD4P46367 519 aaKnown RBP5.63□□□□□ -1.51
BBC1YJL020C CST9Q06032 482 aa5.63□□□□□ -1.51
BBC1YJL020C BRE1Q07457 700 aaKnown RBP5.62□□□□□ -1.51
BBC1YJL020C NAB3P38996 802 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
BBC1YJL020C HPC2Q01448 625 aa5.62□□□□□ -1.51
BBC1YJL020C HEM3P28789 327 aa5.62□□□□□ -1.51
BBC1YJL020C GLC3P32775 704 aa5.62□□□□□ -1.51
BBC1YJL020C SET1P38827 1080 aaKnown RBP5.61□□□□□ -1.51
BBC1YJL020C YSP2Q06681 1438 aa5.61□□□□□ -1.51
BBC1YJL020C SLD2P34252 453 aa5.6□□□□□ -1.51
BBC1YJL020C YAH1Q12184 172 aaKnown RBP5.6□□□□□ -1.51
BBC1YJL020C NMD2P38798 1089 aaKnown RBP5.6□□□□□ -1.51
BBC1YJL020C PMC1P38929 1173 aaPredicted RBP5.6□□□□□ -1.51
BBC1YJL020C FPR4Q06205 392 aaPredicted RBP5.6□□□□□ -1.51
BBC1YJL020C HAP1P0CE41 1502 aa5.6□□□□□ -1.51
BBC1YJL020C GLN1P32288 370 aaKnown RBP5.6□□□□□ -1.51
BBC1YJL020C YOR093CQ12275 1648 aa5.59□□□□□ -1.51
BBC1YJL020C SEC7P11075 2009 aaKnown RBP5.59□□□□□ -1.51
BBC1YJL020C KEX1P09620 729 aa5.59□□□□□ -1.51
BBC1YJL020C KIP3P53086 805 aaKnown RBP5.59□□□□□ -1.51
BBC1YJL020C TOM20P35180 183 aa5.58□□□□□ -1.52
BBC1YJL020C RAM2P29703 316 aa5.58□□□□□ -1.52
BBC1YJL020C NUP42P49686 430 aaKnown RBP5.58□□□□□ -1.52
BBC1YJL020C TFB3Q03290 321 aa5.58□□□□□ -1.52
BBC1YJL020C PBS2P08018 668 aa5.57□□□□□ -1.52
BBC1YJL020C CST6P40535 587 aa5.57□□□□□ -1.52
BBC1YJL020C DNF2Q12675 1612 aa5.56□□□□□ -1.52
BBC1YJL020C RAD2P07276 1031 aa5.56□□□□□ -1.52
BBC1YJL020C DAL5P15365 543 aa5.55□□□□□ -1.52
BBC1YJL020C GAL11P19659 1081 aa5.55□□□□□ -1.52
BBC1YJL020C PKC1P24583 1151 aa5.55□□□□□ -1.52
BBC1YJL020C RRP15Q06511 250 aaPredicted RBP5.55□□□□□ -1.52
BBC1YJL020C DRS2P39524 1355 aa5.55□□□□□ -1.52
BBC1YJL020C DIT2P21595 489 aa5.55□□□□□ -1.52
BBC1YJL020C TY4A-JP47023 414 aa5.55□□□□□ -1.52
BBC1YJL020C SSA2P10592 639 aaKnown RBP5.54□□□□□ -1.52
BBC1YJL020C NOB1Q08444 459 aaKnown RBP5.54□□□□□ -1.52
BBC1YJL020C NUP188P52593 1655 aaKnown RBP5.54□□□□□ -1.52
BBC1YJL020C ALD2P47771 506 aa5.54□□□□□ -1.52
BBC1YJL020C RPA135P22138 1203 aaKnown RBP5.53□□□□□ -1.52
BBC1YJL020C RPS0AP32905 252 aaKnown RBP5.53□□□□□ -1.52
BBC1YJL020C BNR1P40450 1375 aa5.53□□□□□ -1.52
BBC1YJL020C GIR2Q03768 265 aaPredicted RBP5.52□□□□□ -1.53
BBC1YJL020C SSA4P22202 642 aaKnown RBP5.52□□□□□ -1.53
BBC1YJL020C TPM2P40414 161 aa5.52□□□□□ -1.53
BBC1YJL020C AIM21P40563 679 aa5.52□□□□□ -1.53
BBC1YJL020C RNH70P53331 553 aa5.52□□□□□ -1.53
BBC1YJL020C BOI2P39969 1040 aa5.51□□□□□ -1.53
BBC1YJL020C BIM1P40013 344 aa5.51□□□□□ -1.53
BBC1YJL020C BNI1P41832 1953 aa5.51□□□□□ -1.53
BBC1YJL020C VMA4P22203 233 aaKnown RBP5.51□□□□□ -1.53
BBC1YJL020C CDC3P32457 520 aaKnown RBP5.51□□□□□ -1.53
BBC1YJL020C CAB3P36076 571 aa5.51□□□□□ -1.53
BBC1YJL020C ATG32P40458 529 aa5.51□□□□□ -1.53
BBC1YJL020C ISW2Q08773 1120 aa5.51□□□□□ -1.53
BBC1YJL020C TAF13P11747 167 aa5.5□□□□□ -1.53
BBC1YJL020C ENP1P38333 483 aaKnown RBP5.5□□□□□ -1.53
BBC1YJL020C SVL3Q03088 825 aaKnown RBP5.5□□□□□ -1.53
BBC1YJL020C YDL121CQ07541 149 aa5.5□□□□□ -1.53
BBC1YJL020C MPE1P35728 441 aaKnown RBP5.5□□□□□ -1.53
BBC1YJL020C NNF1P47149 201 aa5.5□□□□□ -1.53
BBC1YJL020C PSD2P53037 1138 aaKnown RBP5.5□□□□□ -1.53
BBC1YJL020C NOP53Q12080 455 aaKnown RBP5.5□□□□□ -1.53
BBC1YJL020C RPT2P40327 437 aaKnown RBP5.49□□□□□ -1.53
BBC1YJL020C NHA1Q99271 985 aa5.49□□□□□ -1.53
BBC1YJL020C POL5P39985 1022 aaKnown RBP5.48□□□□□ -1.53
BBC1YJL020C VMR1P38735 1592 aa5.48□□□□□ -1.53
BBC1YJL020C NFU1P32860 256 aa5.48□□□□□ -1.53
BBC1YJL020C IPL1P38991 367 aa5.48□□□□□ -1.53
BBC1YJL020C MAK21Q12176 1025 aaKnown RBP5.48□□□□□ -1.53
BBC1YJL020C PRI1P10363 409 aa5.47□□□□□ -1.53
BBC1YJL020C RPG1P38249 964 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms