RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C TY1A-LR1P0CX68 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-MR2P0CX69 440 aa5.18□□□□□ -1.58
YIR040CYIR040C SEC2P17065 759 aa5.18□□□□□ -1.58
YIR040CYIR040C CLB5P30283 435 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-JR2P47099 440 aa5.18□□□□□ -1.58
YIR040CYIR040C NIS1P53939 407 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-DR1Q03856 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-ML1Q04706 440 aaKnown RBP5.18□□□□□ -1.58
YIR040CYIR040C TY1A-BRQ12217 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-NL2Q12470 440 aa5.18□□□□□ -1.58
YIR040CYIR040C TY1A-GR2Q12485 440 aa5.18□□□□□ -1.58
YIR040CYIR040C ATF2P53296 535 aa5.17□□□□□ -1.58
YIR040CYIR040C KEX2P13134 814 aa5.16□□□□□ -1.58
YIR040CYIR040C SIT4P20604 311 aa5.16□□□□□ -1.58
YIR040CYIR040C PRT1P06103 763 aaKnown RBP5.15□□□□□ -1.59
YIR040CYIR040C SDH2P21801 266 aa5.15□□□□□ -1.59
YIR040CYIR040C GCD11P32481 527 aaKnown RBP5.15□□□□□ -1.59
YIR040CYIR040C NPL4P33755 580 aa5.15□□□□□ -1.59
YIR040CYIR040C GYP1Q08484 637 aa5.15□□□□□ -1.59
YIR040CYIR040C AIM7Q12156 149 aa5.15□□□□□ -1.59
YIR040CYIR040C RPN1P38764 993 aaKnown RBP5.14□□□□□ -1.59
YIR040CYIR040C FPK1P53739 893 aa5.14□□□□□ -1.59
YIR040CYIR040C RGA2Q06407 1009 aa5.14□□□□□ -1.59
YIR040CYIR040C KIN1P13185 1064 aa5.12□□□□□ -1.59
YIR040CYIR040C SCJ1P25303 377 aa5.11□□□□□ -1.59
YIR040CYIR040C SAS4Q04003 481 aa5.11□□□□□ -1.59
YIR040CYIR040C RTF1P53064 558 aa5.1□□□□□ -1.59
YIR040CYIR040C YNL115CP53925 644 aa5.1□□□□□ -1.59
YIR040CYIR040C AGE1Q04412 482 aa5.1□□□□□ -1.59
YIR040CYIR040C TYW1Q08960 810 aaKnown RBP5.1□□□□□ -1.59
YIR040CYIR040C KTR1P27810 393 aaKnown RBP5.09□□□□□ -1.59
YIR040CYIR040C HST2P53686 357 aa5.09□□□□□ -1.59
YIR040CYIR040C YMR196WQ04336 1088 aa5.09□□□□□ -1.59
YIR040CYIR040C RRN7P40992 514 aa5.08□□□□□ -1.6
YIR040CYIR040C RAS1P01119 309 aa5.07□□□□□ -1.6
YIR040CYIR040C SLY41P22215 453 aa5.07□□□□□ -1.6
YIR040CYIR040C PAC1P39946 494 aaKnown RBP5.07□□□□□ -1.6
YIR040CYIR040C TUB4P53378 473 aa5.07□□□□□ -1.6
YIR040CYIR040C DPS1P04802 557 aaKnown RBP5.06□□□□□ -1.6
YIR040CYIR040C ESS1P22696 170 aa5.06□□□□□ -1.6
YIR040CYIR040C MMP1Q12372 583 aa5.06□□□□□ -1.6
YIR040CYIR040C YJU3P28321 313 aa5.05□□□□□ -1.6
YIR040CYIR040C GLN1P32288 370 aaKnown RBP5.05□□□□□ -1.6
YIR040CYIR040C SPT16P32558 1035 aaKnown RBP5.05□□□□□ -1.6
YIR040CYIR040C CSN12P47130 423 aa5.05□□□□□ -1.6
YIR040CYIR040C AMS1P22855 1083 aa5.03□□□□□ -1.6
YIR040CYIR040C MRF1P30775 413 aaPredicted RBP5.03□□□□□ -1.6
YIR040CYIR040C GUA1P38625 525 aaKnown RBP5.03□□□□□ -1.6
YIR040CYIR040C CST6P40535 587 aa5.03□□□□□ -1.6
YIR040CYIR040C TRM1P15565 570 aaKnown RBP5.02□□□□□ -1.61
YIR040CYIR040C ERG12P07277 443 aa5.01□□□□□ -1.61
YIR040CYIR040C MOD5P07884 428 aa5.01□□□□□ -1.61
YIR040CYIR040C PAT1P25644 796 aaKnown RBP5.01□□□□□ -1.61
YIR040CYIR040C LEO1P38439 464 aa5.01□□□□□ -1.61
YIR040CYIR040C PUS6P53294 404 aa5.01□□□□□ -1.61
YIR040CYIR040C PKH3Q03306 898 aaPredicted RBP5.01□□□□□ -1.61
YIR040CYIR040C RSC30P38781 883 aa5□□□□□ -1.61
YIR040CYIR040C LAM6Q08001 693 aa5□□□□□ -1.61
YIR040CYIR040C YEL077CQ3E7X8 1277 aa5□□□□□ -1.61
YIR040CYIR040C PDC1P06169 563 aaKnown RBP4.99□□□□□ -1.61
YIR040CYIR040C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
YIR040CYIR040C BDP1P46678 594 aa4.98□□□□□ -1.61
YIR040CYIR040C CLA4P48562 842 aa4.98□□□□□ -1.61
YIR040CYIR040C FRK1Q03002 865 aaPredicted RBP4.98□□□□□ -1.61
YIR040CYIR040C YDL206WQ12424 762 aa4.98□□□□□ -1.61
YIR040CYIR040C SRC1Q03707 834 aa4.97□□□□□ -1.61
YIR040CYIR040C RAD59Q12223 238 aa4.97□□□□□ -1.61
YIR040CYIR040C ARG8P18544 423 aa4.96□□□□□ -1.62
YIR040CYIR040C RPA14P50106 137 aa4.96□□□□□ -1.62
YIR040CYIR040C KXD1P53158 218 aa4.96□□□□□ -1.62
YIR040CYIR040C TBF1Q02457 562 aa4.96□□□□□ -1.62
YIR040CYIR040C SSA2P10592 639 aaKnown RBP4.95□□□□□ -1.62
YIR040CYIR040C TPD3P31383 635 aa4.95□□□□□ -1.62
YIR040CYIR040C HXT10P43581 546 aa4.95□□□□□ -1.62
YIR040CYIR040C PUS5Q06244 254 aa4.95□□□□□ -1.62
YIR040CYIR040C HPC2Q01448 625 aa4.94□□□□□ -1.62
YIR040CYIR040C YPR097WQ06839 1073 aa4.94□□□□□ -1.62
YIR040CYIR040C RRD1P40454 393 aaKnown RBP4.93□□□□□ -1.62
YIR040CYIR040C AIR1P40507 360 aaKnown RBP4.93□□□□□ -1.62
YIR040CYIR040C TFB3Q03290 321 aa4.93□□□□□ -1.62
YIR040CYIR040C ALR1Q08269 859 aa4.93□□□□□ -1.62
YIR040CYIR040C PKC1P24583 1151 aa4.92□□□□□ -1.62
YIR040CYIR040C RGA1P39083 1007 aa4.9□□□□□ -1.63
YIR040CYIR040C HED1Q03937 162 aa4.89□□□□□ -1.63
YIR040CYIR040C MAK16P10962 306 aaPredicted RBP4.87□□□□□ -1.63
YIR040CYIR040C TRK1P12685 1235 aa4.87□□□□□ -1.63
YIR040CYIR040C BRL1P38770 471 aa4.87□□□□□ -1.63
YIR040CYIR040C FIG4P42837 879 aa4.87□□□□□ -1.63
YIR040CYIR040C ITT1Q04638 464 aa4.87□□□□□ -1.63
YIR040CYIR040C MET32Q12041 191 aa4.87□□□□□ -1.63
YIR040CYIR040C CDC4P07834 779 aa4.86□□□□□ -1.63
YIR040CYIR040C VAC17P25591 423 aa4.86□□□□□ -1.63
YIR040CYIR040C DMA2P53924 522 aa4.86□□□□□ -1.63
YIR040CYIR040C YBL036CP38197 257 aa4.85□□□□□ -1.63
YIR040CYIR040C KIP2P28743 706 aa4.84□□□□□ -1.63
YIR040CYIR040C BIO2P32451 375 aa4.84□□□□□ -1.63
YIR040CYIR040C CSE4P36012 229 aa4.84□□□□□ -1.63
YIR040CYIR040C SYH1Q02875 849 aaKnown RBP4.84□□□□□ -1.63
YIR040CYIR040C YPR084WQ06821 456 aa4.84□□□□□ -1.63
YIR040CYIR040C IXR1P33417 597 aa4.83□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms