RNA–Protein interactions for RNA: YIR005W

IST3, Transcript of Component of the U2 snRNP, yeastyeast

Gene IST3, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IST3YIR005W TY1A-LR1P0CX68 440 aa8.44□□□□□ -1.06
IST3YIR005W TY1A-MR2P0CX69 440 aa8.44□□□□□ -1.06
IST3YIR005W TY1A-JR2P47099 440 aa8.44□□□□□ -1.06
IST3YIR005W TY1A-DR1Q03856 440 aa8.44□□□□□ -1.06
IST3YIR005W TY1A-ML1Q04706 440 aaKnown RBP8.44□□□□□ -1.06
IST3YIR005W TY1A-BRQ12217 440 aa8.44□□□□□ -1.06
IST3YIR005W TY1A-NL2Q12470 440 aa8.44□□□□□ -1.06
IST3YIR005W TY1A-GR2Q12485 440 aa8.44□□□□□ -1.06
IST3YIR005W ERG12P07277 443 aa8.42□□□□□ -1.06
IST3YIR005W CLB5P30283 435 aa8.42□□□□□ -1.06
IST3YIR005W GCD11P32481 527 aaKnown RBP8.42□□□□□ -1.06
IST3YIR005W TRK1P12685 1235 aa8.4□□□□□ -1.06
IST3YIR005W SEC2P17065 759 aa8.4□□□□□ -1.06
IST3YIR005W IES2P40154 320 aa8.4□□□□□ -1.06
IST3YIR005W SPT16P32558 1035 aaKnown RBP8.39□□□□□ -1.07
IST3YIR005W PAT1P25644 796 aaKnown RBP8.36□□□□□ -1.07
IST3YIR005W SPB4P25808 606 aaPredicted RBP8.34□□□□□ -1.07
IST3YIR005W RRN7P40992 514 aa8.34□□□□□ -1.07
IST3YIR005W KEX2P13134 814 aa8.33□□□□□ -1.08
IST3YIR005W NUP42P49686 430 aaKnown RBP8.33□□□□□ -1.08
IST3YIR005W CST6P40535 587 aa8.32□□□□□ -1.08
IST3YIR005W LAM6Q08001 693 aa8.31□□□□□ -1.08
IST3YIR005W RTF1P53064 558 aa8.29□□□□□ -1.08
IST3YIR005W ERF2Q06551 359 aa8.29□□□□□ -1.08
IST3YIR005W TEA1P47988 759 aa8.27□□□□□ -1.09
IST3YIR005W FRK1Q03002 865 aaPredicted RBP8.26□□□□□ -1.09
IST3YIR005W BDP1P46678 594 aa8.25□□□□□ -1.09
IST3YIR005W SIT4P20604 311 aa8.24□□□□□ -1.09
IST3YIR005W DIT2P21595 489 aa8.23□□□□□ -1.09
IST3YIR005W YNL115CP53925 644 aa8.23□□□□□ -1.09
IST3YIR005W PAC1P39946 494 aaKnown RBP8.22□□□□□ -1.09
IST3YIR005W AIR1P40507 360 aaKnown RBP8.22□□□□□ -1.09
IST3YIR005W AGE1Q04412 482 aa8.22□□□□□ -1.09
IST3YIR005W CLA4P48562 842 aa8.21□□□□□ -1.1
IST3YIR005W TUB4P53378 473 aa8.21□□□□□ -1.1
IST3YIR005W NIS1P53939 407 aa8.21□□□□□ -1.1
IST3YIR005W CDC4P07834 779 aa8.19□□□□□ -1.1
IST3YIR005W RQC2Q12532 1038 aaKnown RBP8.19□□□□□ -1.1
IST3YIR005W MOD5P07884 428 aa8.18□□□□□ -1.1
IST3YIR005W BRE2P43132 505 aa8.18□□□□□ -1.1
IST3YIR005W HED1Q03937 162 aa8.18□□□□□ -1.1
IST3YIR005W GCR2Q01722 534 aa8.15□□□□□ -1.1
IST3YIR005W YMR196WQ04336 1088 aa8.15□□□□□ -1.1
IST3YIR005W FPK1P53739 893 aa8.13□□□□□ -1.11
IST3YIR005W KXD1P53158 218 aa8.11□□□□□ -1.11
IST3YIR005W YNR021WP53723 404 aaKnown RBP8.11□□□□□ -1.11
IST3YIR005W SLY41P22215 453 aa8.1□□□□□ -1.11
IST3YIR005W TPD3P31383 635 aa8.1□□□□□ -1.11
IST3YIR005W ATF2P53296 535 aa8.09□□□□□ -1.11
IST3YIR005W HST2P53686 357 aa8.08□□□□□ -1.12
IST3YIR005W RGA1P39083 1007 aa8.07□□□□□ -1.12
IST3YIR005W RRD1P40454 393 aaKnown RBP8.07□□□□□ -1.12
IST3YIR005W PUS5Q06244 254 aa8.06□□□□□ -1.12
IST3YIR005W PDC1P06169 563 aaKnown RBP8.05□□□□□ -1.12
IST3YIR005W HXT10P43581 546 aa8.05□□□□□ -1.12
IST3YIR005W TBF1Q02457 562 aa8.05□□□□□ -1.12
IST3YIR005W MET32Q12041 191 aa8.04□□□□□ -1.12
IST3YIR005W AFT1P22149 690 aa8.03□□□□□ -1.12
IST3YIR005W GLC3P32775 704 aa8.03□□□□□ -1.12
IST3YIR005W PUS6P53294 404 aa8.03□□□□□ -1.12
IST3YIR005W RPA14P50106 137 aa8.02□□□□□ -1.13
IST3YIR005W ALR1Q08269 859 aa8.02□□□□□ -1.13
IST3YIR005W GLN1P32288 370 aaKnown RBP8.01□□□□□ -1.13
IST3YIR005W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
IST3YIR005W HST3P53687 447 aa8.01□□□□□ -1.13
IST3YIR005W MMP1Q12372 583 aa8.01□□□□□ -1.13
IST3YIR005W YDL206WQ12424 762 aa8.01□□□□□ -1.13
IST3YIR005W TRM1P15565 570 aaKnown RBP8□□□□□ -1.13
IST3YIR005W ASH1P34233 588 aa8□□□□□ -1.13
IST3YIR005W SYH1Q02875 849 aaKnown RBP8□□□□□ -1.13
IST3YIR005W AIM7Q12156 149 aa8□□□□□ -1.13
IST3YIR005W SCJ1P25303 377 aa7.99□□□□□ -1.13
IST3YIR005W YPR097WQ06839 1073 aa7.99□□□□□ -1.13
IST3YIR005W ENV9Q08651 330 aa7.96□□□□□ -1.14
IST3YIR005W YPL062WQ02781 134 aa7.95□□□□□ -1.14
IST3YIR005W ESS1P22696 170 aa7.94□□□□□ -1.14
IST3YIR005W GAR1P28007 205 aaKnown RBP7.94□□□□□ -1.14
IST3YIR005W MET22P32179 357 aa7.94□□□□□ -1.14
IST3YIR005W GBP2P25555 427 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
IST3YIR005W MSB3P48566 633 aaPredicted RBP7.93□□□□□ -1.14
IST3YIR005W KIP2P28743 706 aa7.92□□□□□ -1.14
IST3YIR005W RGA2Q06407 1009 aa7.92□□□□□ -1.14
IST3YIR005W YDR444WQ04093 687 aa7.9□□□□□ -1.14
IST3YIR005W YJU3P28321 313 aa7.89□□□□□ -1.15
IST3YIR005W IXR1P33417 597 aa7.89□□□□□ -1.15
IST3YIR005W YJR115WP47152 169 aa7.89□□□□□ -1.15
IST3YIR005W TYW1Q08960 810 aaKnown RBP7.89□□□□□ -1.15
IST3YIR005W LCB5Q06147 687 aaKnown RBP7.88□□□□□ -1.15
IST3YIR005W KTR1P27810 393 aaKnown RBP7.86□□□□□ -1.15
IST3YIR005W MRT4P33201 236 aaKnown RBP7.86□□□□□ -1.15
IST3YIR005W RSC30P38781 883 aa7.86□□□□□ -1.15
IST3YIR005W RTT106P40161 455 aa7.86□□□□□ -1.15
IST3YIR005W PKH3Q03306 898 aaPredicted RBP7.86□□□□□ -1.15
IST3YIR005W UGA3P26370 528 aa7.85□□□□□ -1.15
IST3YIR005W CSN12P47130 423 aa7.85□□□□□ -1.15
IST3YIR005W VAC17P25591 423 aa7.84□□□□□ -1.15
IST3YIR005W LEU3P08638 886 aa7.83□□□□□ -1.16
IST3YIR005W ARG8P18544 423 aa7.81□□□□□ -1.16
IST3YIR005W PTK2P47116 818 aaKnown RBP7.81□□□□□ -1.16
IST3YIR005W SRF1Q12516 437 aa7.81□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms