RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeastyeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK1YHR135C SRB8P25648 1427 aa8.77□□□□□ -1.01
YCK1YHR135C VMA1P17255 1071 aaKnown RBP8.76□□□□□ -1.01
YCK1YHR135C CKB1P43639 278 aa8.76□□□□□ -1.01
YCK1YHR135C EAP1P36041 632 aaKnown RBP8.75□□□□□ -1.01
YCK1YHR135C IQG1Q12280 1495 aa8.74□□□□□ -1.01
YCK1YHR135C YSP2Q06681 1438 aa8.72□□□□□ -1.01
YCK1YHR135C MAK11P20484 414 aaKnown RBP8.72□□□□□ -1.01
YCK1YHR135C ULI1P43604 169 aa8.72□□□□□ -1.01
YCK1YHR135C SAM3Q08986 587 aa8.72□□□□□ -1.01
YCK1YHR135C GCN2P15442 1659 aa8.71□□□□□ -1.01
YCK1YHR135C LTE1P07866 1435 aa8.71□□□□□ -1.01
YCK1YHR135C RAM2P29703 316 aa8.71□□□□□ -1.02
YCK1YHR135C YOL036WQ08206 761 aa8.71□□□□□ -1.02
YCK1YHR135C SEC7P11075 2009 aaKnown RBP8.7□□□□□ -1.02
YCK1YHR135C DOP1Q03921 1698 aa8.7□□□□□ -1.02
YCK1YHR135C SET4P42948 560 aa8.69□□□□□ -1.02
YCK1YHR135C CHC1P22137 1653 aaKnown RBP8.68□□□□□ -1.02
YCK1YHR135C ABP1P15891 592 aaKnown RBP8.67□□□□□ -1.02
YCK1YHR135C BNI1P41832 1953 aa8.65□□□□□ -1.03
YCK1YHR135C YOR093CQ12275 1648 aa8.63□□□□□ -1.03
YCK1YHR135C IOC2Q12072 812 aa8.63□□□□□ -1.03
YCK1YHR135C GYP5Q12344 894 aa8.63□□□□□ -1.03
YCK1YHR135C MMS1Q06211 1407 aa8.63□□□□□ -1.03
YCK1YHR135C MIF2P35201 549 aa8.62□□□□□ -1.03
YCK1YHR135C BUD21Q08492 214 aaPredicted RBP8.62□□□□□ -1.03
YCK1YHR135C LDB19Q12502 818 aa8.62□□□□□ -1.03
YCK1YHR135C DRS2P39524 1355 aa8.61□□□□□ -1.03
YCK1YHR135C BNR1P40450 1375 aa8.61□□□□□ -1.03
YCK1YHR135C TRM3Q07527 1436 aa8.59□□□□□ -1.03
YCK1YHR135C TRP5P00931 707 aaKnown RBP8.59□□□□□ -1.03
YCK1YHR135C COQ8P27697 501 aa8.58□□□□□ -1.04
YCK1YHR135C FKH1P40466 484 aa8.58□□□□□ -1.04
YCK1YHR135C VMR1P38735 1592 aa8.57□□□□□ -1.04
YCK1YHR135C GRE2Q12068 342 aaKnown RBP8.57□□□□□ -1.04
YCK1YHR135C PDR5P33302 1511 aaKnown RBP8.56□□□□□ -1.04
YCK1YHR135C HTA1P04911 132 aaKnown RBP8.56□□□□□ -1.04
YCK1YHR135C HTA2P04912 132 aa8.56□□□□□ -1.04
YCK1YHR135C NOP53Q12080 455 aaKnown RBP8.56□□□□□ -1.04
YCK1YHR135C YJL171CP46992 396 aa8.55□□□□□ -1.04
YCK1YHR135C YNL035CP53962 389 aaKnown RBP8.54□□□□□ -1.04
YCK1YHR135C ITT1Q04638 464 aa8.54□□□□□ -1.04
YCK1YHR135C PTC3P34221 468 aaKnown RBP8.54□□□□□ -1.04
YCK1YHR135C AIR2Q12476 344 aaKnown RBP8.54□□□□□ -1.04
YCK1YHR135C NUP188P52593 1655 aaKnown RBP8.53□□□□□ -1.04
YCK1YHR135C RTG1P32607 177 aa8.53□□□□□ -1.04
YCK1YHR135C DCW1P36091 449 aa8.53□□□□□ -1.04
YCK1YHR135C ATH1P48016 1211 aa8.53□□□□□ -1.04
YCK1YHR135C JIP4Q03361 876 aa8.53□□□□□ -1.04
YCK1YHR135C SEC61P32915 480 aa8.52□□□□□ -1.05
YCK1YHR135C EDS1P38073 919 aa8.51□□□□□ -1.05
YCK1YHR135C GUT1P32190 709 aa8.51□□□□□ -1.05
YCK1YHR135C NCR1Q12200 1170 aa8.5□□□□□ -1.05
YCK1YHR135C TFG1P41895 735 aaPredicted RBP8.49□□□□□ -1.05
YCK1YHR135C DNF2Q12675 1612 aa8.49□□□□□ -1.05
YCK1YHR135C IML1P47170 1584 aa8.49□□□□□ -1.05
YCK1YHR135C PDR11P40550 1411 aa8.48□□□□□ -1.05
YCK1YHR135C PTC4P38089 393 aa8.47□□□□□ -1.05
YCK1YHR135C NOP7P53261 605 aaKnown RBP8.47□□□□□ -1.05
YCK1YHR135C YEL023CP39992 682 aa8.46□□□□□ -1.06
YCK1YHR135C BMT6Q12291 365 aa8.45□□□□□ -1.06
YCK1YHR135C SET1P38827 1080 aaKnown RBP8.43□□□□□ -1.06
YCK1YHR135C DAN4P47179 1161 aa8.43□□□□□ -1.06
YCK1YHR135C NUP192P47054 1683 aa8.42□□□□□ -1.06
YCK1YHR135C PAF1P38351 445 aa8.42□□□□□ -1.06
YCK1YHR135C POL5P39985 1022 aaKnown RBP8.42□□□□□ -1.06
YCK1YHR135C RAV1P47104 1357 aa8.4□□□□□ -1.06
YCK1YHR135C RTC1Q08281 1341 aa8.36□□□□□ -1.07
YCK1YHR135C TYS1P36421 394 aaKnown RBP8.36□□□□□ -1.07
YCK1YHR135C YDL129WQ07555 291 aa8.35□□□□□ -1.07
YCK1YHR135C DNF3Q12674 1656 aa8.34□□□□□ -1.07
YCK1YHR135C ORC1P54784 914 aaPredicted RBP8.34□□□□□ -1.07
YCK1YHR135C TY3B-IQ7LHG5 1498 aaKnown RBP8.33□□□□□ -1.08
YCK1YHR135C IPL1P38991 367 aa8.32□□□□□ -1.08
YCK1YHR135C TAF5P38129 798 aa8.31□□□□□ -1.08
YCK1YHR135C AI4P03878 556 aa8.3□□□□□ -1.08
YCK1YHR135C SAP30P38429 201 aa8.3□□□□□ -1.08
YCK1YHR135C MPH3P0CE00 602 aa8.29□□□□□ -1.08
YCK1YHR135C SOL3P38858 249 aa8.29□□□□□ -1.08
YCK1YHR135C YGR273CP53329 174 aa8.29□□□□□ -1.08
YCK1YHR135C NST1P53935 1240 aa8.29□□□□□ -1.08
YCK1YHR135C YAP3P38749 330 aa8.28□□□□□ -1.08
YCK1YHR135C PML39Q03760 334 aa8.27□□□□□ -1.09
YCK1YHR135C URN1Q06525 465 aaKnown RBP8.27□□□□□ -1.09
YCK1YHR135C YLR419WQ06698 1435 aaKnown RBP8.26□□□□□ -1.09
YCK1YHR135C SPT7P35177 1332 aa8.25□□□□□ -1.09
YCK1YHR135C MHP1P43638 1398 aa8.24□□□□□ -1.09
YCK1YHR135C ESL2P36168 1195 aa8.23□□□□□ -1.09
YCK1YHR135C KIP3P53086 805 aaKnown RBP8.23□□□□□ -1.09
YCK1YHR135C RAD9P14737 1309 aa8.23□□□□□ -1.09
YCK1YHR135C BCK1Q01389 1478 aa8.23□□□□□ -1.09
YCK1YHR135C MLP1Q02455 1875 aaKnown RBP8.22□□□□□ -1.09
YCK1YHR135C HAP1P0CE41 1502 aa8.22□□□□□ -1.09
YCK1YHR135C USO1P25386 1790 aa8.22□□□□□ -1.09
YCK1YHR135C DMA1P38823 416 aa8.21□□□□□ -1.09
YCK1YHR135C SEC3P33332 1336 aaKnown RBP8.2□□□□□ -1.1
YCK1YHR135C YPR148CQ06523 435 aa8.2□□□□□ -1.1
YCK1YHR135C CHL1P22516 861 aaPredicted RBP8.19□□□□□ -1.1
YCK1YHR135C LEU3P08638 886 aa8.18□□□□□ -1.1
YCK1YHR135C PEX29Q03370 554 aa8.18□□□□□ -1.1
YCK1YHR135C CAB1Q04430 367 aa8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms