RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C KEX2P13134 814 aa8.03□□□□□ -1.12
CUP1-2YHR055C SIT4P20604 311 aa8.03□□□□□ -1.12
CUP1-2YHR055C RTF1P53064 558 aa8.03□□□□□ -1.12
CUP1-2YHR055C PRT1P06103 763 aaKnown RBP8.02□□□□□ -1.13
CUP1-2YHR055C YNL115CP53925 644 aa8.02□□□□□ -1.13
CUP1-2YHR055C GLN1P32288 370 aaKnown RBP8.01□□□□□ -1.13
CUP1-2YHR055C CSN12P47130 423 aa8.01□□□□□ -1.13
CUP1-2YHR055C HST2P53686 357 aa8.01□□□□□ -1.13
CUP1-2YHR055C SAS4Q04003 481 aa8.01□□□□□ -1.13
CUP1-2YHR055C XDJ1P39102 459 aa7.99□□□□□ -1.13
CUP1-2YHR055C MMP1Q12372 583 aa7.99□□□□□ -1.13
CUP1-2YHR055C SSA2P10592 639 aaKnown RBP7.98□□□□□ -1.13
CUP1-2YHR055C SLY41P22215 453 aa7.98□□□□□ -1.13
CUP1-2YHR055C ERF2Q06551 359 aa7.98□□□□□ -1.13
CUP1-2YHR055C PAT1P25644 796 aaKnown RBP7.97□□□□□ -1.13
CUP1-2YHR055C TY1A-DR4O74302 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-HP0C2I4 478 aaKnown RBP7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-AP0CX57 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-PR1P0CX58 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-ORP0CX59 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-PR2P0CX60 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-DR5P0CX65 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-ER2P0CX66 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-GR3P0CX67 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-LR1P0CX68 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-MR2P0CX69 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-JR2P47099 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-DR1Q03856 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-ML1Q04706 440 aaKnown RBP7.96□□□□□ -1.14
CUP1-2YHR055C TYW1Q08960 810 aaKnown RBP7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-BRQ12217 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-NL2Q12470 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C TY1A-GR2Q12485 440 aa7.96□□□□□ -1.14
CUP1-2YHR055C SEC2P17065 759 aa7.95□□□□□ -1.14
CUP1-2YHR055C SCJ1P25303 377 aa7.95□□□□□ -1.14
CUP1-2YHR055C SPT16P32558 1035 aaKnown RBP7.95□□□□□ -1.14
CUP1-2YHR055C GUA1P38625 525 aaKnown RBP7.95□□□□□ -1.14
CUP1-2YHR055C ESS1P22696 170 aa7.93□□□□□ -1.14
CUP1-2YHR055C MRF1P30775 413 aaPredicted RBP7.93□□□□□ -1.14
CUP1-2YHR055C RRN7P40992 514 aa7.92□□□□□ -1.14
CUP1-2YHR055C KTR1P27810 393 aaKnown RBP7.91□□□□□ -1.14
CUP1-2YHR055C PKH3Q03306 898 aaPredicted RBP7.91□□□□□ -1.14
CUP1-2YHR055C HGH1P48362 394 aaKnown RBP7.9□□□□□ -1.14
CUP1-2YHR055C TUB4P53378 473 aa7.9□□□□□ -1.14
CUP1-2YHR055C HPC2Q01448 625 aa7.9□□□□□ -1.14
CUP1-2YHR055C TBF1Q02457 562 aa7.9□□□□□ -1.14
CUP1-2YHR055C PUS6P53294 404 aa7.89□□□□□ -1.15
CUP1-2YHR055C ERG12P07277 443 aa7.88□□□□□ -1.15
CUP1-2YHR055C YJU3P28321 313 aa7.87□□□□□ -1.15
CUP1-2YHR055C BRL1P38770 471 aa7.87□□□□□ -1.15
CUP1-2YHR055C AGE1Q04412 482 aa7.87□□□□□ -1.15
CUP1-2YHR055C LAM6Q08001 693 aa7.87□□□□□ -1.15
CUP1-2YHR055C TRM1P15565 570 aaKnown RBP7.86□□□□□ -1.15
CUP1-2YHR055C ARG8P18544 423 aa7.86□□□□□ -1.15
CUP1-2YHR055C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
CUP1-2YHR055C YEL077CQ3E7X8 1277 aa7.85□□□□□ -1.15
CUP1-2YHR055C PAC1P39946 494 aaKnown RBP7.84□□□□□ -1.15
CUP1-2YHR055C RAD59Q12223 238 aa7.84□□□□□ -1.15
CUP1-2YHR055C KXD1P53158 218 aa7.83□□□□□ -1.16
CUP1-2YHR055C TFB3Q03290 321 aa7.83□□□□□ -1.16
CUP1-2YHR055C YDL206WQ12424 762 aa7.81□□□□□ -1.16
CUP1-2YHR055C SDH2P21801 266 aa7.8□□□□□ -1.16
CUP1-2YHR055C RPA14P50106 137 aa7.8□□□□□ -1.16
CUP1-2YHR055C ALR1Q08269 859 aa7.8□□□□□ -1.16
CUP1-2YHR055C DPS1P04802 557 aaKnown RBP7.79□□□□□ -1.16
CUP1-2YHR055C AMS1P22855 1083 aa7.79□□□□□ -1.16
CUP1-2YHR055C DMA2P53924 522 aa7.79□□□□□ -1.16
CUP1-2YHR055C RSC30P38781 883 aa7.78□□□□□ -1.16
CUP1-2YHR055C PDC1P06169 563 aaKnown RBP7.76□□□□□ -1.17
CUP1-2YHR055C YPR097WQ06839 1073 aa7.76□□□□□ -1.17
CUP1-2YHR055C YBL036CP38197 257 aa7.75□□□□□ -1.17
CUP1-2YHR055C HXT10P43581 546 aa7.75□□□□□ -1.17
CUP1-2YHR055C FRK1Q03002 865 aaPredicted RBP7.75□□□□□ -1.17
CUP1-2YHR055C BDP1P46678 594 aa7.74□□□□□ -1.17
CUP1-2YHR055C MOD5P07884 428 aa7.73□□□□□ -1.17
CUP1-2YHR055C PKC1P24583 1151 aa7.73□□□□□ -1.17
CUP1-2YHR055C CSE4P36012 229 aa7.73□□□□□ -1.17
CUP1-2YHR055C CST6P40535 587 aa7.73□□□□□ -1.17
CUP1-2YHR055C TPD3P31383 635 aa7.72□□□□□ -1.17
CUP1-2YHR055C RRD1P40454 393 aaKnown RBP7.72□□□□□ -1.17
CUP1-2YHR055C RAS1P01119 309 aa7.71□□□□□ -1.18
CUP1-2YHR055C MAK16P10962 306 aaPredicted RBP7.7□□□□□ -1.18
CUP1-2YHR055C YJL007CP47080 104 aa7.67□□□□□ -1.18
CUP1-2YHR055C SPT5P27692 1063 aaKnown RBP7.66□□□□□ -1.18
CUP1-2YHR055C KIP2P28743 706 aa7.66□□□□□ -1.18
CUP1-2YHR055C PUS5Q06244 254 aa7.66□□□□□ -1.18
CUP1-2YHR055C NAF1P53919 492 aaKnown RBP7.64□□□□□ -1.19
CUP1-2YHR055C SYH1Q02875 849 aaKnown RBP7.64□□□□□ -1.19
CUP1-2YHR055C HED1Q03937 162 aa7.63□□□□□ -1.19
CUP1-2YHR055C TEC1P18412 486 aa7.62□□□□□ -1.19
CUP1-2YHR055C IXR1P33417 597 aa7.62□□□□□ -1.19
CUP1-2YHR055C VAC17P25591 423 aa7.61□□□□□ -1.19
CUP1-2YHR055C BIO2P32451 375 aa7.61□□□□□ -1.19
CUP1-2YHR055C BIM1P40013 344 aa7.61□□□□□ -1.19
CUP1-2YHR055C RPL34BP40525 121 aaKnown RBP7.61□□□□□ -1.19
CUP1-2YHR055C FIG4P42837 879 aa7.6□□□□□ -1.19
CUP1-2YHR055C YNL108CP53929 270 aa7.6□□□□□ -1.19
CUP1-2YHR055C GUT2P32191 649 aa7.58□□□□□ -1.2
CUP1-2YHR055C YDJ1P25491 409 aaKnown RBP7.57□□□□□ -1.2
CUP1-2YHR055C CLA4P48562 842 aa7.57□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms