RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W TY1A-ML1Q04706 440 aaKnown RBP7.88□□□□□ -1.15
CIC1YHR052W TY1A-BRQ12217 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-NL2Q12470 440 aa7.88□□□□□ -1.15
CIC1YHR052W TY1A-GR2Q12485 440 aa7.88□□□□□ -1.15
CIC1YHR052W SEC2P17065 759 aa7.87□□□□□ -1.15
CIC1YHR052W MVP1P40959 511 aaKnown RBP7.85□□□□□ -1.15
CIC1YHR052W COX6P00427 148 aa7.84□□□□□ -1.15
CIC1YHR052W SPT16P32558 1035 aaKnown RBP7.83□□□□□ -1.16
CIC1YHR052W YPR109WQ06104 294 aa7.82□□□□□ -1.16
CIC1YHR052W LAM6Q08001 693 aa7.81□□□□□ -1.16
CIC1YHR052W RGR1P19263 1082 aa7.8□□□□□ -1.16
CIC1YHR052W FRK1Q03002 865 aaPredicted RBP7.8□□□□□ -1.16
CIC1YHR052W MAK21Q12176 1025 aaKnown RBP7.8□□□□□ -1.16
CIC1YHR052W RRN7P40992 514 aa7.78□□□□□ -1.16
CIC1YHR052W BRE2P43132 505 aa7.78□□□□□ -1.16
CIC1YHR052W BDP1P46678 594 aa7.75□□□□□ -1.17
CIC1YHR052W ERF2Q06551 359 aa7.74□□□□□ -1.17
CIC1YHR052W KEX2P13134 814 aa7.73□□□□□ -1.17
CIC1YHR052W GCR2Q01722 534 aa7.73□□□□□ -1.17
CIC1YHR052W YPL062WQ02781 134 aa7.73□□□□□ -1.17
CIC1YHR052W GAR1P28007 205 aaKnown RBP7.72□□□□□ -1.17
CIC1YHR052W PAT1P25644 796 aaKnown RBP7.7□□□□□ -1.18
CIC1YHR052W CDC4P07834 779 aa7.69□□□□□ -1.18
CIC1YHR052W PBS2P08018 668 aa7.65□□□□□ -1.18
CIC1YHR052W GBP2P25555 427 aaKnown RBP RIP-Chip data7.65□□□□□ -1.18not detected
CIC1YHR052W PAC1P39946 494 aaKnown RBP7.64□□□□□ -1.19
CIC1YHR052W HED1Q03937 162 aa7.64□□□□□ -1.19
CIC1YHR052W MET22P32179 357 aa7.61□□□□□ -1.19
CIC1YHR052W PSE1P32337 1089 aaKnown RBP7.59□□□□□ -1.19
CIC1YHR052W AGE1Q04412 482 aa7.59□□□□□ -1.19
CIC1YHR052W MOD5P07884 428 aa7.58□□□□□ -1.2
CIC1YHR052W TUB4P53378 473 aa7.58□□□□□ -1.2
CIC1YHR052W PUS5Q06244 254 aa7.58□□□□□ -1.2
CIC1YHR052W MET32Q12041 191 aa7.58□□□□□ -1.2
CIC1YHR052W CKB1P43639 278 aa7.57□□□□□ -1.2
CIC1YHR052W ASH1P34233 588 aa7.55□□□□□ -1.2
CIC1YHR052W ENV9Q08651 330 aa7.54□□□□□ -1.2
CIC1YHR052W MAM3Q12296 706 aa7.53□□□□□ -1.2
CIC1YHR052W CLB5P30283 435 aa7.52□□□□□ -1.21
CIC1YHR052W YDR444WQ04093 687 aa7.52□□□□□ -1.21
CIC1YHR052W IES2P40154 320 aa7.51□□□□□ -1.21
CIC1YHR052W AFT1P22149 690 aa7.5□□□□□ -1.21
CIC1YHR052W YNL115CP53925 644 aa7.5□□□□□ -1.21
CIC1YHR052W RTF1P53064 558 aa7.49□□□□□ -1.21
CIC1YHR052W HST3P53687 447 aa7.49□□□□□ -1.21
CIC1YHR052W SIT4P20604 311 aa7.47□□□□□ -1.21
CIC1YHR052W DSF2P38213 736 aa7.45□□□□□ -1.22
CIC1YHR052W TEA1P47988 759 aa7.45□□□□□ -1.22
CIC1YHR052W NIS1P53939 407 aa7.45□□□□□ -1.22
CIC1YHR052W NUP42P49686 430 aaKnown RBP7.44□□□□□ -1.22
CIC1YHR052W LCB5Q06147 687 aaKnown RBP7.44□□□□□ -1.22
CIC1YHR052W YJR115WP47152 169 aa7.43□□□□□ -1.22
CIC1YHR052W KXD1P53158 218 aa7.43□□□□□ -1.22
CIC1YHR052W YDL176WQ12027 708 aa7.42□□□□□ -1.22
CIC1YHR052W RRD1P40454 393 aaKnown RBP7.41□□□□□ -1.22
CIC1YHR052W DIT2P21595 489 aa7.39□□□□□ -1.23
CIC1YHR052W HXT10P43581 546 aa7.39□□□□□ -1.23
CIC1YHR052W PDC1P06169 563 aaKnown RBP7.38□□□□□ -1.23
CIC1YHR052W SLY41P22215 453 aa7.38□□□□□ -1.23
CIC1YHR052W TPD3P31383 635 aa7.37□□□□□ -1.23
CIC1YHR052W FPK1P53739 893 aa7.36□□□□□ -1.23
CIC1YHR052W SYH1Q02875 849 aaKnown RBP7.36□□□□□ -1.23
CIC1YHR052W SAS10Q12136 610 aaPredicted RBP7.36□□□□□ -1.23
CIC1YHR052W DMA1P38823 416 aa7.35□□□□□ -1.23
CIC1YHR052W SPB4P25808 606 aaPredicted RBP7.34□□□□□ -1.23
CIC1YHR052W MSB3P48566 633 aaPredicted RBP7.33□□□□□ -1.24
CIC1YHR052W YMR196WQ04336 1088 aa7.33□□□□□ -1.24
CIC1YHR052W SCJ1P25303 377 aa7.31□□□□□ -1.24
CIC1YHR052W YDL206WQ12424 762 aa7.31□□□□□ -1.24
CIC1YHR052W UGA3P26370 528 aa7.3□□□□□ -1.24
CIC1YHR052W KIP2P28743 706 aa7.29□□□□□ -1.24
CIC1YHR052W PUS6P53294 404 aa7.29□□□□□ -1.24
CIC1YHR052W PTK2P47116 818 aaKnown RBP7.28□□□□□ -1.24
CIC1YHR052W CAF120P53836 1060 aa7.28□□□□□ -1.24
CIC1YHR052W TBF1Q02457 562 aa7.28□□□□□ -1.24
CIC1YHR052W ALR1Q08269 859 aa7.28□□□□□ -1.24
CIC1YHR052W RPA14P50106 137 aa7.27□□□□□ -1.25
CIC1YHR052W IXR1P33417 597 aa7.26□□□□□ -1.25
CIC1YHR052W OPT2Q06593 877 aa7.26□□□□□ -1.25
CIC1YHR052W YPR097WQ06839 1073 aa7.26□□□□□ -1.25
CIC1YHR052W SRF1Q12516 437 aa7.26□□□□□ -1.25
CIC1YHR052W TRM1P15565 570 aaKnown RBP7.25□□□□□ -1.25
CIC1YHR052W ACO2P39533 789 aa7.22□□□□□ -1.25
CIC1YHR052W HST2P53686 357 aa7.22□□□□□ -1.25
CIC1YHR052W MMP1Q12372 583 aa7.21□□□□□ -1.26
CIC1YHR052W MRT4P33201 236 aaKnown RBP7.2□□□□□ -1.26
CIC1YHR052W YLR346CQ06139 101 aa7.2□□□□□ -1.26
CIC1YHR052W ESS1P22696 170 aa7.19□□□□□ -1.26
CIC1YHR052W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
CIC1YHR052W TYW1Q08960 810 aaKnown RBP7.18□□□□□ -1.26
CIC1YHR052W RQC2Q12532 1038 aaKnown RBP7.17□□□□□ -1.26
CIC1YHR052W GLN1P32288 370 aaKnown RBP7.16□□□□□ -1.26
CIC1YHR052W NUP85P46673 744 aa7.16□□□□□ -1.26
CIC1YHR052W YJU3P28321 313 aa7.15□□□□□ -1.26
CIC1YHR052W YIR007WP40566 764 aa7.15□□□□□ -1.26
CIC1YHR052W ATF2P53296 535 aa7.15□□□□□ -1.26
CIC1YHR052W ITT1Q04638 464 aa7.15□□□□□ -1.26
CIC1YHR052W GLY1P37303 387 aaKnown RBP7.14□□□□□ -1.27
CIC1YHR052W SCW11P53189 542 aa7.13□□□□□ -1.27
CIC1YHR052W MIP1P15801 1254 aa7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms