RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W TY1A-DR1Q03856 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-ML1Q04706 440 aaKnown RBP7.12□□□□□ -1.27
RTT102YGR275W TY1A-BRQ12217 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-NL2Q12470 440 aa7.12□□□□□ -1.27
RTT102YGR275W TY1A-GR2Q12485 440 aa7.12□□□□□ -1.27
RTT102YGR275W COX6P00427 148 aa7.11□□□□□ -1.27
RTT102YGR275W MVP1P40959 511 aaKnown RBP7.11□□□□□ -1.27
RTT102YGR275W CLA4P48562 842 aa7.1□□□□□ -1.27
RTT102YGR275W SEC2P17065 759 aa7.09□□□□□ -1.27
RTT102YGR275W BRE2P43132 505 aa7.09□□□□□ -1.27
RTT102YGR275W FRK1Q03002 865 aaPredicted RBP7.09□□□□□ -1.27
RTT102YGR275W YPR109WQ06104 294 aa7.09□□□□□ -1.27
RTT102YGR275W RRN7P40992 514 aa7.08□□□□□ -1.28
RTT102YGR275W LAM6Q08001 693 aa7.08□□□□□ -1.28
RTT102YGR275W RGR1P19263 1082 aa7.05□□□□□ -1.28
RTT102YGR275W PAT1P25644 796 aaKnown RBP7.05□□□□□ -1.28
RTT102YGR275W GCR2Q01722 534 aa7.05□□□□□ -1.28
RTT102YGR275W BDP1P46678 594 aa7.03□□□□□ -1.28
RTT102YGR275W KEX2P13134 814 aa7.01□□□□□ -1.29
RTT102YGR275W GAR1P28007 205 aaKnown RBP7.01□□□□□ -1.29
RTT102YGR275W GBP2P25555 427 aaKnown RBP RIP-Chip data7□□□□□ -1.29 RIP-Chip
RTT102YGR275W YPL062WQ02781 134 aa7□□□□□ -1.29
RTT102YGR275W CDC4P07834 779 aa6.99□□□□□ -1.29
RTT102YGR275W ERF2Q06551 359 aa6.98□□□□□ -1.29
RTT102YGR275W PBS2P08018 668 aa6.96□□□□□ -1.3
RTT102YGR275W HED1Q03937 162 aa6.94□□□□□ -1.3
RTT102YGR275W PAC1P39946 494 aaKnown RBP6.93□□□□□ -1.3
RTT102YGR275W CKB1P43639 278 aa6.93□□□□□ -1.3
RTT102YGR275W PSE1P32337 1089 aaKnown RBP6.92□□□□□ -1.3
RTT102YGR275W CLB5P30283 435 aa6.89□□□□□ -1.31
RTT102YGR275W MAM3Q12296 706 aa6.89□□□□□ -1.31
RTT102YGR275W TUB4P53378 473 aa6.88□□□□□ -1.31
RTT102YGR275W MET22P32179 357 aa6.87□□□□□ -1.31
RTT102YGR275W PUS5Q06244 254 aa6.87□□□□□ -1.31
RTT102YGR275W AGE1Q04412 482 aa6.86□□□□□ -1.31
RTT102YGR275W MOD5P07884 428 aa6.85□□□□□ -1.31
RTT102YGR275W ASH1P34233 588 aa6.85□□□□□ -1.31
RTT102YGR275W IES2P40154 320 aa6.85□□□□□ -1.31
RTT102YGR275W ENV9Q08651 330 aa6.85□□□□□ -1.31
RTT102YGR275W MET32Q12041 191 aa6.85□□□□□ -1.31
RTT102YGR275W HST3P53687 447 aa6.84□□□□□ -1.31
RTT102YGR275W YDR444WQ04093 687 aa6.83□□□□□ -1.32
RTT102YGR275W RTF1P53064 558 aa6.82□□□□□ -1.32
RTT102YGR275W YNL115CP53925 644 aa6.82□□□□□ -1.32
RTT102YGR275W AFT1P22149 690 aa6.81□□□□□ -1.32
RTT102YGR275W TEA1P47988 759 aa6.8□□□□□ -1.32
RTT102YGR275W DSF2P38213 736 aa6.78□□□□□ -1.32
RTT102YGR275W KXD1P53158 218 aa6.77□□□□□ -1.33
RTT102YGR275W SIT4P20604 311 aa6.76□□□□□ -1.33
RTT102YGR275W NIS1P53939 407 aa6.76□□□□□ -1.33
RTT102YGR275W LCB5Q06147 687 aaKnown RBP6.76□□□□□ -1.33
RTT102YGR275W YJR115WP47152 169 aa6.74□□□□□ -1.33
RTT102YGR275W NUP42P49686 430 aaKnown RBP6.74□□□□□ -1.33
RTT102YGR275W SLY41P22215 453 aa6.72□□□□□ -1.33
RTT102YGR275W SPB4P25808 606 aaPredicted RBP6.72□□□□□ -1.33
RTT102YGR275W RRD1P40454 393 aaKnown RBP6.72□□□□□ -1.33
RTT102YGR275W HXT10P43581 546 aa6.72□□□□□ -1.33
RTT102YGR275W YMR196WQ04336 1088 aa6.72□□□□□ -1.33
RTT102YGR275W SYH1Q02875 849 aaKnown RBP6.71□□□□□ -1.34
RTT102YGR275W PDC1P06169 563 aaKnown RBP6.7□□□□□ -1.34
RTT102YGR275W DIT2P21595 489 aa6.7□□□□□ -1.34
RTT102YGR275W SAS10Q12136 610 aaPredicted RBP6.7□□□□□ -1.34
RTT102YGR275W TPD3P31383 635 aa6.69□□□□□ -1.34
RTT102YGR275W DMA1P38823 416 aa6.69□□□□□ -1.34
RTT102YGR275W FPK1P53739 893 aa6.69□□□□□ -1.34
RTT102YGR275W TBF1Q02457 562 aa6.68□□□□□ -1.34
RTT102YGR275W YDL176WQ12027 708 aa6.68□□□□□ -1.34
RTT102YGR275W MSB3P48566 633 aaPredicted RBP6.67□□□□□ -1.34
RTT102YGR275W UGA3P26370 528 aa6.66□□□□□ -1.34
RTT102YGR275W KIP2P28743 706 aa6.66□□□□□ -1.34
RTT102YGR275W YDL206WQ12424 762 aa6.66□□□□□ -1.34
RTT102YGR275W ALR1Q08269 859 aa6.65□□□□□ -1.34
RTT102YGR275W SRF1Q12516 437 aa6.64□□□□□ -1.35
RTT102YGR275W RPA14P50106 137 aa6.63□□□□□ -1.35
RTT102YGR275W PUS6P53294 404 aa6.63□□□□□ -1.35
RTT102YGR275W PTK2P47116 818 aaKnown RBP6.62□□□□□ -1.35
RTT102YGR275W SCJ1P25303 377 aa6.61□□□□□ -1.35
RTT102YGR275W IXR1P33417 597 aa6.61□□□□□ -1.35
RTT102YGR275W CAF120P53836 1060 aa6.61□□□□□ -1.35
RTT102YGR275W TRM1P15565 570 aaKnown RBP6.6□□□□□ -1.35
RTT102YGR275W YPR097WQ06839 1073 aa6.59□□□□□ -1.35
RTT102YGR275W OPT2Q06593 877 aa6.58□□□□□ -1.36
RTT102YGR275W HST2P53686 357 aa6.57□□□□□ -1.36
RTT102YGR275W YLR346CQ06139 101 aa6.57□□□□□ -1.36
RTT102YGR275W MMP1Q12372 583 aa6.57□□□□□ -1.36
RTT102YGR275W TYW1Q08960 810 aaKnown RBP6.56□□□□□ -1.36
RTT102YGR275W MRT4P33201 236 aaKnown RBP6.54□□□□□ -1.36
RTT102YGR275W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
RTT102YGR275W ATF2P53296 535 aa6.54□□□□□ -1.36
RTT102YGR275W ESS1P22696 170 aa6.53□□□□□ -1.36
RTT102YGR275W GLN1P32288 370 aaKnown RBP6.53□□□□□ -1.36
RTT102YGR275W ACO2P39533 789 aa6.53□□□□□ -1.36
RTT102YGR275W NUP85P46673 744 aa6.51□□□□□ -1.37
RTT102YGR275W GLY1P37303 387 aaKnown RBP6.5□□□□□ -1.37
RTT102YGR275W SCW11P53189 542 aa6.5□□□□□ -1.37
RTT102YGR275W MIP1P15801 1254 aa6.49□□□□□ -1.37
RTT102YGR275W YJU3P28321 313 aa6.48□□□□□ -1.37
RTT102YGR275W RTT106P40161 455 aa6.48□□□□□ -1.37
RTT102YGR275W YIR007WP40566 764 aa6.48□□□□□ -1.37
RTT102YGR275W YGR035CP53222 116 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms