RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C RTF1P53064 558 aa7.44□□□□□ -1.22
RTA1YGR213C SSA2P10592 639 aaKnown RBP7.43□□□□□ -1.22
RTA1YGR213C GLN1P32288 370 aaKnown RBP7.43□□□□□ -1.22
RTA1YGR213C HPC2Q01448 625 aa7.43□□□□□ -1.22
RTA1YGR213C TYW1Q08960 810 aaKnown RBP7.43□□□□□ -1.22
RTA1YGR213C KEX2P13134 814 aa7.42□□□□□ -1.22
RTA1YGR213C YNL115CP53925 644 aa7.42□□□□□ -1.22
RTA1YGR213C BUD20Q08004 166 aaPredicted RBP7.42□□□□□ -1.22
RTA1YGR213C DMA2P53924 522 aa7.41□□□□□ -1.22
RTA1YGR213C ERF2Q06551 359 aa7.41□□□□□ -1.22
RTA1YGR213C MMP1Q12372 583 aa7.41□□□□□ -1.22
RTA1YGR213C SCJ1P25303 377 aa7.4□□□□□ -1.22
RTA1YGR213C TY1A-DR4O74302 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-HP0C2I4 478 aaKnown RBP7.39□□□□□ -1.23
RTA1YGR213C TY1A-AP0CX57 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-PR1P0CX58 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-ORP0CX59 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-PR2P0CX60 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-DR5P0CX65 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-ER2P0CX66 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-GR3P0CX67 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-LR1P0CX68 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-MR2P0CX69 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-JR2P47099 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-DR1Q03856 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-ML1Q04706 440 aaKnown RBP7.39□□□□□ -1.23
RTA1YGR213C TY1A-BRQ12217 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-NL2Q12470 440 aa7.39□□□□□ -1.23
RTA1YGR213C TY1A-GR2Q12485 440 aa7.39□□□□□ -1.23
RTA1YGR213C SEC2P17065 759 aa7.38□□□□□ -1.23
RTA1YGR213C GCD11P32481 527 aaKnown RBP7.38□□□□□ -1.23
RTA1YGR213C SLY41P22215 453 aa7.37□□□□□ -1.23
RTA1YGR213C ESS1P22696 170 aa7.37□□□□□ -1.23
RTA1YGR213C PRT1P06103 763 aaKnown RBP7.36□□□□□ -1.23
RTA1YGR213C VRP1P37370 817 aa7.35□□□□□ -1.23
RTA1YGR213C TFB3Q03290 321 aa7.35□□□□□ -1.23
RTA1YGR213C YJU3P28321 313 aa7.34□□□□□ -1.23
RTA1YGR213C PKH3Q03306 898 aaPredicted RBP7.34□□□□□ -1.23
RTA1YGR213C BCK2P33306 851 aa7.33□□□□□ -1.24
RTA1YGR213C HGH1P48362 394 aaKnown RBP7.33□□□□□ -1.24
RTA1YGR213C AGE1Q04412 482 aa7.33□□□□□ -1.24
RTA1YGR213C BRL1P38770 471 aa7.32□□□□□ -1.24
RTA1YGR213C SAS4Q04003 481 aa7.32□□□□□ -1.24
RTA1YGR213C RSC30P38781 883 aa7.31□□□□□ -1.24
RTA1YGR213C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
RTA1YGR213C TUB4P53378 473 aa7.31□□□□□ -1.24
RTA1YGR213C GYP1Q08484 637 aa7.31□□□□□ -1.24
RTA1YGR213C RAD59Q12223 238 aa7.31□□□□□ -1.24
RTA1YGR213C PUS6P53294 404 aa7.3□□□□□ -1.24
RTA1YGR213C LAM6Q08001 693 aa7.3□□□□□ -1.24
RTA1YGR213C TRM1P15565 570 aaKnown RBP7.29□□□□□ -1.24
RTA1YGR213C PKC1P24583 1151 aa7.29□□□□□ -1.24
RTA1YGR213C ARG8P18544 423 aa7.28□□□□□ -1.24
RTA1YGR213C RRN7P40992 514 aa7.28□□□□□ -1.24
RTA1YGR213C PAT1P25644 796 aaKnown RBP7.26□□□□□ -1.25
RTA1YGR213C XDJ1P39102 459 aa7.26□□□□□ -1.25
RTA1YGR213C PAC1P39946 494 aaKnown RBP7.26□□□□□ -1.25
RTA1YGR213C SPT16P32558 1035 aaKnown RBP7.25□□□□□ -1.25
RTA1YGR213C TBF1Q02457 562 aa7.25□□□□□ -1.25
RTA1YGR213C TAF7Q05021 590 aa7.25□□□□□ -1.25
RTA1YGR213C SDH2P21801 266 aa7.23□□□□□ -1.25
RTA1YGR213C CSE4P36012 229 aa7.23□□□□□ -1.25
RTA1YGR213C YDL206WQ12424 762 aa7.23□□□□□ -1.25
RTA1YGR213C MRF1P30775 413 aaPredicted RBP7.22□□□□□ -1.25
RTA1YGR213C YBL036CP38197 257 aa7.22□□□□□ -1.25
RTA1YGR213C RPA14P50106 137 aa7.22□□□□□ -1.25
RTA1YGR213C YPR097WQ06839 1073 aa7.2□□□□□ -1.26
RTA1YGR213C PDC1P06169 563 aaKnown RBP7.19□□□□□ -1.26
RTA1YGR213C MOD5P07884 428 aa7.19□□□□□ -1.26
RTA1YGR213C MAK16P10962 306 aaPredicted RBP7.19□□□□□ -1.26
RTA1YGR213C KXD1P53158 218 aa7.19□□□□□ -1.26
RTA1YGR213C ALR1Q08269 859 aa7.19□□□□□ -1.26
RTA1YGR213C YJL007CP47080 104 aa7.18□□□□□ -1.26
RTA1YGR213C ERG12P07277 443 aa7.17□□□□□ -1.26
RTA1YGR213C TPD3P31383 635 aa7.17□□□□□ -1.26
RTA1YGR213C BIO2P32451 375 aa7.16□□□□□ -1.26
RTA1YGR213C BIM1P40013 344 aa7.16□□□□□ -1.26
RTA1YGR213C HXT10P43581 546 aa7.16□□□□□ -1.26
RTA1YGR213C SPT5P27692 1063 aaKnown RBP7.14□□□□□ -1.27
RTA1YGR213C RRD1P40454 393 aaKnown RBP7.13□□□□□ -1.27
RTA1YGR213C ATG32P40458 529 aa7.13□□□□□ -1.27
RTA1YGR213C NAF1P53919 492 aaKnown RBP7.13□□□□□ -1.27
RTA1YGR213C YEL077CQ3E7X8 1277 aa7.13□□□□□ -1.27
RTA1YGR213C CST6P40535 587 aa7.12□□□□□ -1.27
RTA1YGR213C SUP45P12385 437 aaKnown RBP7.11□□□□□ -1.27
RTA1YGR213C AMS1P22855 1083 aa7.11□□□□□ -1.27
RTA1YGR213C BDP1P46678 594 aa7.11□□□□□ -1.27
RTA1YGR213C RLF2Q12495 606 aa7.11□□□□□ -1.27
RTA1YGR213C YNL108CP53929 270 aa7.1□□□□□ -1.27
RTA1YGR213C YDJ1P25491 409 aaKnown RBP7.09□□□□□ -1.27
RTA1YGR213C TIF1P10081 395 aaKnown RBP7.08□□□□□ -1.28
RTA1YGR213C FIG4P42837 879 aa7.08□□□□□ -1.28
RTA1YGR213C VAC17P25591 423 aa7.07□□□□□ -1.28
RTA1YGR213C FRK1Q03002 865 aaPredicted RBP7.07□□□□□ -1.28
RTA1YGR213C RAS1P01119 309 aa7.06□□□□□ -1.28
RTA1YGR213C TEC1P18412 486 aa7.06□□□□□ -1.28
RTA1YGR213C RPL34BP40525 121 aaKnown RBP7.06□□□□□ -1.28
RTA1YGR213C YPR084WQ06821 456 aa7.06□□□□□ -1.28
RTA1YGR213C ENO2P00925 437 aaKnown RBP7.05□□□□□ -1.28
RTA1YGR213C PUS5Q06244 254 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms