RNA–Protein interactions for RNA: YGR104C

SRB5, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB5, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB5YGR104C PAT1P25644 796 aaKnown RBP7.67□□□□□ -1.18
SRB5YGR104C IES2P40154 320 aa7.65□□□□□ -1.18
SRB5YGR104C GCR2Q01722 534 aa7.64□□□□□ -1.19
SRB5YGR104C TY1A-DR4O74302 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-HP0C2I4 478 aaKnown RBP7.63□□□□□ -1.19
SRB5YGR104C TY1A-AP0CX57 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-PR1P0CX58 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-ORP0CX59 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-PR2P0CX60 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-DR5P0CX65 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-ER2P0CX66 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-GR3P0CX67 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-LR1P0CX68 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-MR2P0CX69 440 aa7.63□□□□□ -1.19
SRB5YGR104C CST6P40535 587 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-JR2P47099 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-DR1Q03856 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-ML1Q04706 440 aaKnown RBP7.63□□□□□ -1.19
SRB5YGR104C TY1A-BRQ12217 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-NL2Q12470 440 aa7.63□□□□□ -1.19
SRB5YGR104C TY1A-GR2Q12485 440 aa7.63□□□□□ -1.19
SRB5YGR104C SEC2P17065 759 aa7.62□□□□□ -1.19
SRB5YGR104C BRE2P43132 505 aa7.61□□□□□ -1.19
SRB5YGR104C NUP42P49686 430 aaKnown RBP7.61□□□□□ -1.19
SRB5YGR104C RRN7P40992 514 aa7.6□□□□□ -1.19
SRB5YGR104C RTF1P53064 558 aa7.6□□□□□ -1.19
SRB5YGR104C LAM6Q08001 693 aa7.6□□□□□ -1.19
SRB5YGR104C AIR1P40507 360 aaKnown RBP7.59□□□□□ -1.19
SRB5YGR104C FRK1Q03002 865 aaPredicted RBP7.59□□□□□ -1.19
SRB5YGR104C TEA1P47988 759 aa7.58□□□□□ -1.2
SRB5YGR104C CLA4P48562 842 aa7.56□□□□□ -1.2
SRB5YGR104C BDP1P46678 594 aa7.55□□□□□ -1.2
SRB5YGR104C CDC4P07834 779 aa7.54□□□□□ -1.2
SRB5YGR104C KEX2P13134 814 aa7.53□□□□□ -1.2
SRB5YGR104C GBP2P25555 427 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
SRB5YGR104C SIT4P20604 311 aa7.52□□□□□ -1.21
SRB5YGR104C YNL115CP53925 644 aa7.52□□□□□ -1.21
SRB5YGR104C YPL062WQ02781 134 aa7.52□□□□□ -1.21
SRB5YGR104C DIT2P21595 489 aa7.51□□□□□ -1.21
SRB5YGR104C HED1Q03937 162 aa7.51□□□□□ -1.21
SRB5YGR104C GAR1P28007 205 aaKnown RBP7.5□□□□□ -1.21
SRB5YGR104C YNR021WP53723 404 aaKnown RBP7.47□□□□□ -1.21
SRB5YGR104C ERF2Q06551 359 aa7.47□□□□□ -1.21
SRB5YGR104C ATF2P53296 535 aa7.46□□□□□ -1.22
SRB5YGR104C YMR196WQ04336 1088 aa7.46□□□□□ -1.22
SRB5YGR104C TUB4P53378 473 aa7.45□□□□□ -1.22
SRB5YGR104C NIS1P53939 407 aa7.45□□□□□ -1.22
SRB5YGR104C PAC1P39946 494 aaKnown RBP7.43□□□□□ -1.22
SRB5YGR104C AGE1Q04412 482 aa7.43□□□□□ -1.22
SRB5YGR104C MOD5P07884 428 aa7.41□□□□□ -1.22
SRB5YGR104C KXD1P53158 218 aa7.41□□□□□ -1.22
SRB5YGR104C FPK1P53739 893 aa7.41□□□□□ -1.22
SRB5YGR104C TPD3P31383 635 aa7.4□□□□□ -1.22
SRB5YGR104C MET22P32179 357 aa7.4□□□□□ -1.22
SRB5YGR104C HST2P53686 357 aa7.4□□□□□ -1.22
SRB5YGR104C ENV9Q08651 330 aa7.4□□□□□ -1.22
SRB5YGR104C SLY41P22215 453 aa7.39□□□□□ -1.23
SRB5YGR104C HST3P53687 447 aa7.39□□□□□ -1.23
SRB5YGR104C AIM7Q12156 149 aa7.39□□□□□ -1.23
SRB5YGR104C ASH1P34233 588 aa7.38□□□□□ -1.23
SRB5YGR104C AFT1P22149 690 aa7.37□□□□□ -1.23
SRB5YGR104C PUS6P53294 404 aa7.37□□□□□ -1.23
SRB5YGR104C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
SRB5YGR104C TBF1Q02457 562 aa7.36□□□□□ -1.23
SRB5YGR104C GLN1P32288 370 aaKnown RBP7.35□□□□□ -1.23
SRB5YGR104C YDR444WQ04093 687 aa7.35□□□□□ -1.23
SRB5YGR104C PUS5Q06244 254 aa7.35□□□□□ -1.23
SRB5YGR104C MET32Q12041 191 aa7.35□□□□□ -1.23
SRB5YGR104C HXT10P43581 546 aa7.34□□□□□ -1.23
SRB5YGR104C RPA14P50106 137 aa7.34□□□□□ -1.23
SRB5YGR104C ALR1Q08269 859 aa7.34□□□□□ -1.23
SRB5YGR104C MMP1Q12372 583 aa7.34□□□□□ -1.23
SRB5YGR104C GLC3P32775 704 aa7.33□□□□□ -1.24
SRB5YGR104C RRD1P40454 393 aaKnown RBP7.32□□□□□ -1.24
SRB5YGR104C TAF7Q05021 590 aa7.31□□□□□ -1.24
SRB5YGR104C YPR097WQ06839 1073 aa7.31□□□□□ -1.24
SRB5YGR104C LEU3P08638 886 aa7.3□□□□□ -1.24
SRB5YGR104C SYH1Q02875 849 aaKnown RBP7.3□□□□□ -1.24
SRB5YGR104C PDC1P06169 563 aaKnown RBP7.29□□□□□ -1.24
SRB5YGR104C LCB5Q06147 687 aaKnown RBP7.29□□□□□ -1.24
SRB5YGR104C YDL206WQ12424 762 aa7.28□□□□□ -1.24
SRB5YGR104C TRM1P15565 570 aaKnown RBP7.27□□□□□ -1.25
SRB5YGR104C RTT106P40161 455 aa7.27□□□□□ -1.25
SRB5YGR104C YJR115WP47152 169 aa7.25□□□□□ -1.25
SRB5YGR104C SCJ1P25303 377 aa7.24□□□□□ -1.25
SRB5YGR104C MSB3P48566 633 aaPredicted RBP7.24□□□□□ -1.25
SRB5YGR104C KIP2P28743 706 aa7.22□□□□□ -1.25
SRB5YGR104C CSN12P47130 423 aa7.22□□□□□ -1.25
SRB5YGR104C SSA2P10592 639 aaKnown RBP7.21□□□□□ -1.26
SRB5YGR104C ESS1P22696 170 aa7.21□□□□□ -1.26
SRB5YGR104C UGA3P26370 528 aa7.2□□□□□ -1.26
SRB5YGR104C IXR1P33417 597 aa7.19□□□□□ -1.26
SRB5YGR104C RPN1P38764 993 aaKnown RBP7.19□□□□□ -1.26
SRB5YGR104C RSC30P38781 883 aa7.18□□□□□ -1.26
SRB5YGR104C SRF1Q12516 437 aa7.18□□□□□ -1.26
SRB5YGR104C MRT4P33201 236 aaKnown RBP7.17□□□□□ -1.26
SRB5YGR104C PKH3Q03306 898 aaPredicted RBP7.17□□□□□ -1.26
SRB5YGR104C TYW1Q08960 810 aaKnown RBP7.17□□□□□ -1.26
SRB5YGR104C YDL176WQ12027 708 aa7.17□□□□□ -1.26
SRB5YGR104C YJU3P28321 313 aa7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms