RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C AIM7Q12156 149 aa5.91□□□□□ -1.46
SWC4YGR002C NIS1P53939 407 aa5.9□□□□□ -1.47
SWC4YGR002C SAS4Q04003 481 aa5.9□□□□□ -1.47
SWC4YGR002C FPK1P53739 893 aa5.87□□□□□ -1.47
SWC4YGR002C ERF2Q06551 359 aa5.87□□□□□ -1.47
SWC4YGR002C TY1A-DR4O74302 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-HP0C2I4 478 aaKnown RBP5.86□□□□□ -1.47
SWC4YGR002C TY1A-AP0CX57 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-PR1P0CX58 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-ORP0CX59 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-PR2P0CX60 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-DR5P0CX65 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-ER2P0CX66 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-GR3P0CX67 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-LR1P0CX68 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-MR2P0CX69 440 aa5.86□□□□□ -1.47
SWC4YGR002C SEC2P17065 759 aa5.86□□□□□ -1.47
SWC4YGR002C SPT16P32558 1035 aaKnown RBP5.86□□□□□ -1.47
SWC4YGR002C TY1A-JR2P47099 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-DR1Q03856 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-ML1Q04706 440 aaKnown RBP5.86□□□□□ -1.47
SWC4YGR002C TY1A-BRQ12217 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-NL2Q12470 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-GR2Q12485 440 aa5.86□□□□□ -1.47
SWC4YGR002C PAT1P25644 796 aaKnown RBP5.85□□□□□ -1.47
SWC4YGR002C RRN7P40992 514 aa5.85□□□□□ -1.47
SWC4YGR002C YNL115CP53925 644 aa5.85□□□□□ -1.47
SWC4YGR002C DPS1P04802 557 aaKnown RBP5.84□□□□□ -1.47
SWC4YGR002C SIT4P20604 311 aa5.84□□□□□ -1.47
SWC4YGR002C MRF1P30775 413 aaPredicted RBP5.84□□□□□ -1.47
SWC4YGR002C RTF1P53064 558 aa5.84□□□□□ -1.47
SWC4YGR002C ERG12P07277 443 aa5.83□□□□□ -1.48
SWC4YGR002C SLY41P22215 453 aa5.83□□□□□ -1.48
SWC4YGR002C GLN1P32288 370 aaKnown RBP5.82□□□□□ -1.48
SWC4YGR002C MMP1Q12372 583 aa5.82□□□□□ -1.48
SWC4YGR002C SCJ1P25303 377 aa5.82□□□□□ -1.48
SWC4YGR002C YEL077CQ3E7X8 1277 aa5.82□□□□□ -1.48
SWC4YGR002C HST2P53686 357 aa5.81□□□□□ -1.48
SWC4YGR002C TYW1Q08960 810 aaKnown RBP5.81□□□□□ -1.48
SWC4YGR002C CSN12P47130 423 aa5.8□□□□□ -1.48
SWC4YGR002C TBF1Q02457 562 aa5.8□□□□□ -1.48
SWC4YGR002C SDH2P21801 266 aa5.79□□□□□ -1.48
SWC4YGR002C GUA1P38625 525 aaKnown RBP5.79□□□□□ -1.48
SWC4YGR002C TUB4P53378 473 aa5.79□□□□□ -1.48
SWC4YGR002C ESS1P22696 170 aa5.78□□□□□ -1.48
SWC4YGR002C PAC1P39946 494 aaKnown RBP5.78□□□□□ -1.48
SWC4YGR002C DMA2P53924 522 aa5.78□□□□□ -1.48
SWC4YGR002C AMS1P22855 1083 aa5.77□□□□□ -1.49
SWC4YGR002C RAS1P01119 309 aa5.76□□□□□ -1.49
SWC4YGR002C AGE1Q04412 482 aa5.76□□□□□ -1.49
SWC4YGR002C SSA2P10592 639 aaKnown RBP5.75□□□□□ -1.49
SWC4YGR002C FRK1Q03002 865 aaPredicted RBP5.75□□□□□ -1.49
SWC4YGR002C PKH3Q03306 898 aaPredicted RBP5.75□□□□□ -1.49
SWC4YGR002C KTR1P27810 393 aaKnown RBP5.74□□□□□ -1.49
SWC4YGR002C YJU3P28321 313 aa5.74□□□□□ -1.49
SWC4YGR002C PUS6P53294 404 aa5.74□□□□□ -1.49
SWC4YGR002C TRM1P15565 570 aaKnown RBP5.74□□□□□ -1.49
SWC4YGR002C ARG8P18544 423 aa5.74□□□□□ -1.49
SWC4YGR002C KXD1P53158 218 aa5.74□□□□□ -1.49
SWC4YGR002C CST6P40535 587 aa5.73□□□□□ -1.49
SWC4YGR002C YDL206WQ12424 762 aa5.73□□□□□ -1.49
SWC4YGR002C BDP1P46678 594 aa5.72□□□□□ -1.49
SWC4YGR002C LAM6Q08001 693 aa5.71□□□□□ -1.5
SWC4YGR002C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SWC4YGR002C HPC2Q01448 625 aa5.7□□□□□ -1.5
SWC4YGR002C TFB3Q03290 321 aa5.7□□□□□ -1.5
SWC4YGR002C ALR1Q08269 859 aa5.7□□□□□ -1.5
SWC4YGR002C RGA2Q06407 1009 aa5.69□□□□□ -1.5
SWC4YGR002C BRL1P38770 471 aa5.68□□□□□ -1.5
SWC4YGR002C RAD59Q12223 238 aa5.68□□□□□ -1.5
SWC4YGR002C PDC1P06169 563 aaKnown RBP5.67□□□□□ -1.5
SWC4YGR002C HXT10P43581 546 aa5.67□□□□□ -1.5
SWC4YGR002C HGH1P48362 394 aaKnown RBP5.67□□□□□ -1.5
SWC4YGR002C RPA14P50106 137 aa5.67□□□□□ -1.5
SWC4YGR002C MOD5P07884 428 aa5.66□□□□□ -1.5
SWC4YGR002C TAF7Q05021 590 aa5.66□□□□□ -1.5
SWC4YGR002C PUS5Q06244 254 aa5.66□□□□□ -1.5
SWC4YGR002C PKC1P24583 1151 aa5.65□□□□□ -1.5
SWC4YGR002C YPR097WQ06839 1073 aa5.65□□□□□ -1.5
SWC4YGR002C RSC30P38781 883 aa5.65□□□□□ -1.51
SWC4YGR002C RRD1P40454 393 aaKnown RBP5.65□□□□□ -1.51
SWC4YGR002C CLA4P48562 842 aa5.65□□□□□ -1.51
SWC4YGR002C TPD3P31383 635 aa5.63□□□□□ -1.51
SWC4YGR002C AIR1P40507 360 aaKnown RBP5.63□□□□□ -1.51
SWC4YGR002C TRK1P12685 1235 aa5.62□□□□□ -1.51
SWC4YGR002C KIP2P28743 706 aa5.62□□□□□ -1.51
SWC4YGR002C HED1Q03937 162 aa5.62□□□□□ -1.51
SWC4YGR002C YBL036CP38197 257 aa5.61□□□□□ -1.51
SWC4YGR002C SRC1Q03707 834 aa5.61□□□□□ -1.51
SWC4YGR002C SYH1Q02875 849 aaKnown RBP5.6□□□□□ -1.51
SWC4YGR002C IXR1P33417 597 aa5.59□□□□□ -1.51
SWC4YGR002C CDC4P07834 779 aa5.57□□□□□ -1.52
SWC4YGR002C YJL007CP47080 104 aa5.57□□□□□ -1.52
SWC4YGR002C MAK16P10962 306 aaPredicted RBP5.57□□□□□ -1.52
SWC4YGR002C CSE4P36012 229 aa5.56□□□□□ -1.52
SWC4YGR002C HST3P53687 447 aa5.56□□□□□ -1.52
SWC4YGR002C TEC1P18412 486 aa5.55□□□□□ -1.52
SWC4YGR002C VAC17P25591 423 aa5.55□□□□□ -1.52
SWC4YGR002C BIO2P32451 375 aa5.55□□□□□ -1.52
SWC4YGR002C BIM1P40013 344 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms