RNA–Protein interactions for RNA: YGL206C

CHC1, Transcript of Clathrin heavy chain, yeast

Gene CHC1, Length 4,962 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHC1	YGL206C	TFB3	Q03290	321 aa		2.66	□□□□□ -1.98
CHC1	YGL206C	UTP4	Q06679	776 aa	Known RBP	2.66	□□□□□ -1.98
CHC1	YGL206C	ISU2	Q12056	156 aa		2.66	□□□□□ -1.98
CHC1	YGL206C	FRA1	Q07825	749 aa		2.66	□□□□□ -1.98
CHC1	YGL206C	YOL036W	Q08206	761 aa		2.65	□□□□□ -1.98
CHC1	YGL206C	RPA14	P50106	137 aa		2.65	□□□□□ -1.99
CHC1	YGL206C	SAS4	Q04003	481 aa		2.65	□□□□□ -1.99
CHC1	YGL206C	DCD1	P06773	312 aa		2.65	□□□□□ -1.99
CHC1	YGL206C	ATG1	P53104	897 aa		2.65	□□□□□ -1.99
CHC1	YGL206C	YML082W	Q04533	649 aa	Known RBP	2.65	□□□□□ -1.99
CHC1	YGL206C	SPT2	P06843	333 aa	Predicted RBP	2.64	□□□□□ -1.99
CHC1	YGL206C	CWC15	Q03772	175 aa	Known RBP	2.64	□□□□□ -1.99
CHC1	YGL206C	APC11	Q12157	165 aa		2.64	□□□□□ -1.99
CHC1	YGL206C	HAP4	P14064	554 aa		2.64	□□□□□ -1.99
CHC1	YGL206C	BNI4	P53858	892 aa		2.64	□□□□□ -1.99
CHC1	YGL206C	SPR3	P41901	512 aa		2.64	□□□□□ -1.99
CHC1	YGL206C	PUS6	P53294	404 aa		2.64	□□□□□ -1.99
CHC1	YGL206C	YNL035C	P53962	389 aa	Known RBP	2.64	□□□□□ -1.99
CHC1	YGL206C	DPL1	Q05567	589 aa		2.64	□□□□□ -1.99
CHC1	YGL206C	RRP15	Q06511	250 aa	Predicted RBP	2.64	□□□□□ -1.99
CHC1	YGL206C	RPP1A	P05318	106 aa	Predicted RBP	2.63	□□□□□ -1.99
CHC1	YGL206C	YPR097W	Q06839	1073 aa		2.63	□□□□□ -1.99
CHC1	YGL206C	GAS4	Q08271	471 aa		2.63	□□□□□ -1.99
CHC1	YGL206C	MMP1	Q12372	583 aa		2.63	□□□□□ -1.99
CHC1	YGL206C	RPP2B	P02400	110 aa	Known RBP	2.63	□□□□□ -1.99
CHC1	YGL206C	PHO87	P25360	923 aa		2.63	□□□□□ -1.99
CHC1	YGL206C	PAM1	P37304	830 aa	Known RBP	2.63	□□□□□ -1.99
CHC1	YGL206C	SLX8	P40072	274 aa		2.63	□□□□□ -1.99
CHC1	YGL206C	NOP2	P40991	618 aa	Known RBP	2.63	□□□□□ -1.99
CHC1	YGL206C	YML020W	Q03722	664 aa		2.63	□□□□□ -1.99
CHC1	YGL206C	SLI15	P38283	698 aa		2.63	□□□□□ -1.99
CHC1	YGL206C	FPK1	P53739	893 aa		2.63	□□□□□ -1.99
CHC1	YGL206C	LSO1	Q3E827	93 aa		2.63	□□□□□ -1.99
CHC1	YGL206C	ARH1	P48360	493 aa		2.62	□□□□□ -1.99
CHC1	YGL206C	IOC2	Q12072	812 aa		2.62	□□□□□ -1.99
CHC1	YGL206C	YJR107W	P47145	328 aa		2.62	□□□□□ -1.99
CHC1	YGL206C	RAD59	Q12223	238 aa		2.62	□□□□□ -1.99
CHC1	YGL206C	MNR2	P35724	969 aa		2.62	□□□□□ -1.99
CHC1	YGL206C	NOP7	P53261	605 aa	Known RBP	2.62	□□□□□ -1.99
CHC1	YGL206C	KTR1	P27810	393 aa	Known RBP	2.62	□□□□□ -1.99
CHC1	YGL206C	KRI1	P42846	591 aa	Known RBP	2.62	□□□□□ -1.99
CHC1	YGL206C	YPR084W	Q06821	456 aa		2.62	□□□□□ -1.99
CHC1	YGL206C	TIF1	P10081	395 aa	Known RBP	2.61	□□□□□ -1.99
CHC1	YGL206C	TIF11	P38912	153 aa	Known RBP	2.61	□□□□□ -1.99
CHC1	YGL206C	SRS2	P12954	1174 aa		2.61	□□□□□ -1.99
CHC1	YGL206C	BIM1	P40013	344 aa		2.61	□□□□□ -1.99
CHC1	YGL206C	MSC6	Q08818	692 aa	Known RBP	2.61	□□□□□ -1.99
CHC1	YGL206C	YBL036C	P38197	257 aa		2.61	□□□□□ -1.99
CHC1	YGL206C	VHR2	P40041	505 aa		2.61	□□□□□ -1.99
CHC1	YGL206C	VTC4	P47075	721 aa		2.61	□□□□□ -1.99
CHC1	YGL206C	NIS1	P53939	407 aa		2.61	□□□□□ -1.99
CHC1	YGL206C	GUT2	P32191	649 aa		2.6	□□□□□ -1.99
CHC1	YGL206C	MRT4	P33201	236 aa	Known RBP	2.6	□□□□□ -1.99
CHC1	YGL206C	OCA5	P38738	679 aa		2.6	□□□□□ -1.99
CHC1	YGL206C	YEL023C	P39992	682 aa		2.6	□□□□□ -1.99
CHC1	YGL206C	NOB1	Q08444	459 aa	Known RBP	2.6	□□□□□ -1.99
CHC1	YGL206C	YTA7	P40340	1379 aa		2.6	□□□□□ -1.99
CHC1	YGL206C	UFD2	P54860	961 aa		2.6	□□□□□ -1.99
CHC1	YGL206C	MCM16	Q12262	181 aa		2.6	□□□□□ -1.99
CHC1	YGL206C	BIO2	P32451	375 aa		2.59	□□□□□ -1.99
CHC1	YGL206C	YBR287W	P38355	427 aa		2.59	□□□□□ -1.99
CHC1	YGL206C	ILV3	P39522	585 aa	Known RBP	2.59	□□□□□ -1.99
CHC1	YGL206C	GTT3	P39996	337 aa		2.59	□□□□□ -1.99
CHC1	YGL206C	GAL2	P13181	574 aa		2.59	□□□□□ -2
CHC1	YGL206C	VPS35	P34110	944 aa		2.59	□□□□□ -2
CHC1	YGL206C	RPL34B	P40525	121 aa	Known RBP	2.59	□□□□□ -2
CHC1	YGL206C	TRL1	P09880	827 aa	Known RBP	2.59	□□□□□ -2
CHC1	YGL206C	RAM1	P22007	431 aa		2.59	□□□□□ -2
CHC1	YGL206C	PUP1	P25043	261 aa		2.59	□□□□□ -2
CHC1	YGL206C	VAC17	P25591	423 aa		2.59	□□□□□ -2
CHC1	YGL206C	NGR1	P32831	672 aa	Known RBP	2.59	□□□□□ -2
CHC1	YGL206C	SCD5	P34758	872 aa		2.59	□□□□□ -2
CHC1	YGL206C	NMD2	P38798	1089 aa	Known RBP	2.59	□□□□□ -2
CHC1	YGL206C	AGE1	Q04412	482 aa		2.59	□□□□□ -2
CHC1	YGL206C	MOD5	P07884	428 aa		2.58	□□□□□ -2
CHC1	YGL206C	YPR109W	Q06104	294 aa		2.58	□□□□□ -2
CHC1	YGL206C	RDS2	P19541	446 aa	Known RBP	2.58	□□□□□ -2
CHC1	YGL206C	SPT23	P35210	1082 aa		2.58	□□□□□ -2
CHC1	YGL206C	SAP155	P43612	1002 aa		2.58	□□□□□ -2
CHC1	YGL206C	TRS33	Q99394	268 aa		2.58	□□□□□ -2
CHC1	YGL206C	UBP9	P39967	754 aa		2.58	□□□□□ -2
CHC1	YGL206C	RSC4	Q02206	625 aa		2.58	□□□□□ -2
CHC1	YGL206C	TGL4	P36165	910 aa		2.58	□□□□□ -2
CHC1	YGL206C	NNF1	P47149	201 aa		2.58	□□□□□ -2
CHC1	YGL206C	STE20	Q03497	939 aa	Known RBP	2.58	□□□□□ -2
CHC1	YGL206C	MSH6	Q03834	1242 aa		2.58	□□□□□ -2
CHC1	YGL206C	TSC13	Q99190	310 aa		2.58	□□□□□ -2
CHC1	YGL206C	ARL1	P38116	183 aa	Known RBP	2.57	□□□□□ -2
CHC1	YGL206C	ATG32	P40458	529 aa		2.57	□□□□□ -2
CHC1	YGL206C	VNX1	P42839	908 aa		2.57	□□□□□ -2
CHC1	YGL206C	UTP14	Q04500	899 aa	Known RBP	2.57	□□□□□ -2
CHC1	YGL206C	ALR1	Q08269	859 aa		2.57	□□□□□ -2
CHC1	YGL206C	PEX21	P50091	288 aa		2.57	□□□□□ -2
CHC1	YGL206C	GCD6	P32501	712 aa	Known RBP	2.57	□□□□□ -2
CHC1	YGL206C	HAP5	Q02516	242 aa		2.57	□□□□□ -2
CHC1	YGL206C	YMR196W	Q04336	1088 aa		2.57	□□□□□ -2
CHC1	YGL206C	YDL129W	Q07555	291 aa		2.57	□□□□□ -2
CHC1	YGL206C	TEC1	P18412	486 aa		2.56	□□□□□ -2
CHC1	YGL206C	EMW1	P42842	904 aa	Known RBP	2.56	□□□□□ -2
CHC1	YGL206C	RPL34A	P87262	121 aa	Predicted RBP	2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms