RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W YOL036WQ08206 761 aa7.38□□□□□ -1.23
CDC43YGL155W NTE1Q04958 1679 aa7.37□□□□□ -1.23
CDC43YGL155W IRC20Q06554 1556 aa7.36□□□□□ -1.23
CDC43YGL155W RPO21P04050 1733 aaKnown RBP7.35□□□□□ -1.23
CDC43YGL155W RPA190P10964 1664 aaKnown RBP7.34□□□□□ -1.23
CDC43YGL155W SRB8P25648 1427 aa7.34□□□□□ -1.23
CDC43YGL155W CHL1P22516 861 aaPredicted RBP7.32□□□□□ -1.24
CDC43YGL155W DNF1P32660 1571 aa7.31□□□□□ -1.24
CDC43YGL155W SAP30P38429 201 aa7.31□□□□□ -1.24
CDC43YGL155W SEC3P33332 1336 aaKnown RBP7.3□□□□□ -1.24
CDC43YGL155W GCN2P15442 1659 aa7.3□□□□□ -1.24
CDC43YGL155W ENP1P38333 483 aaKnown RBP7.29□□□□□ -1.24
CDC43YGL155W MET10P39692 1035 aa7.29□□□□□ -1.24
CDC43YGL155W NOP2P40991 618 aaKnown RBP7.29□□□□□ -1.24
CDC43YGL155W VMA1P17255 1071 aaKnown RBP7.28□□□□□ -1.24
CDC43YGL155W CKB1P43639 278 aa7.28□□□□□ -1.24
CDC43YGL155W NUP159P40477 1460 aa7.28□□□□□ -1.24
CDC43YGL155W PDR10P51533 1564 aa7.28□□□□□ -1.24
CDC43YGL155W NOP7P53261 605 aaKnown RBP7.27□□□□□ -1.25
CDC43YGL155W MAK11P20484 414 aaKnown RBP7.26□□□□□ -1.25
CDC43YGL155W BUD21Q08492 214 aaPredicted RBP7.26□□□□□ -1.25
CDC43YGL155W ARO1P08566 1588 aaKnown RBP7.25□□□□□ -1.25
CDC43YGL155W PRE3P38624 215 aa7.25□□□□□ -1.25
CDC43YGL155W TFG1P41895 735 aaPredicted RBP7.25□□□□□ -1.25
CDC43YGL155W DAN4P47179 1161 aa7.25□□□□□ -1.25
CDC43YGL155W PDR12Q02785 1511 aa7.25□□□□□ -1.25
CDC43YGL155W GDB1Q06625 1536 aa7.25□□□□□ -1.25
CDC43YGL155W MMS1Q06211 1407 aa7.25□□□□□ -1.25
CDC43YGL155W RGA1P39083 1007 aa7.24□□□□□ -1.25
CDC43YGL155W PAF1P38351 445 aa7.22□□□□□ -1.25
CDC43YGL155W XDJ1P39102 459 aa7.22□□□□□ -1.25
CDC43YGL155W SAM3Q08986 587 aa7.22□□□□□ -1.25
CDC43YGL155W NUP157P40064 1391 aaKnown RBP7.21□□□□□ -1.25
CDC43YGL155W SPO14P36126 1683 aa7.21□□□□□ -1.26
CDC43YGL155W EDS1P38073 919 aa7.2□□□□□ -1.26
CDC43YGL155W YDL129WQ07555 291 aa7.2□□□□□ -1.26
CDC43YGL155W IQG1Q12280 1495 aa7.19□□□□□ -1.26
CDC43YGL155W MET5P47169 1442 aa7.18□□□□□ -1.26
CDC43YGL155W BUD3P25558 1636 aa7.17□□□□□ -1.26
CDC43YGL155W COQ8P27697 501 aa7.17□□□□□ -1.26
CDC43YGL155W SPT7P35177 1332 aa7.17□□□□□ -1.26
CDC43YGL155W YRF1-1P0CX20 1796 aa7.17□□□□□ -1.26
CDC43YGL155W YRF1-5P0CX21 1796 aa7.17□□□□□ -1.26
CDC43YGL155W YRF1-8P0CX22 1796 aa7.17□□□□□ -1.26
CDC43YGL155W PDR5P33302 1511 aaKnown RBP7.17□□□□□ -1.26
CDC43YGL155W MIF2P35201 549 aa7.16□□□□□ -1.26
CDC43YGL155W YSP2Q06681 1438 aa7.16□□□□□ -1.26
CDC43YGL155W VRP1P37370 817 aa7.15□□□□□ -1.26
CDC43YGL155W SCT1P32784 759 aa7.14□□□□□ -1.27
CDC43YGL155W JIP4Q03361 876 aa7.14□□□□□ -1.27
CDC43YGL155W DPS1P04802 557 aaKnown RBP7.13□□□□□ -1.27
CDC43YGL155W MHP1P43638 1398 aa7.12□□□□□ -1.27
CDC43YGL155W PTC3P34221 468 aaKnown RBP7.12□□□□□ -1.27
CDC43YGL155W BNR1P40450 1375 aa7.11□□□□□ -1.27
CDC43YGL155W GYP5Q12344 894 aa7.11□□□□□ -1.27
CDC43YGL155W YOR093CQ12275 1648 aa7.1□□□□□ -1.27
CDC43YGL155W SEC7P11075 2009 aaKnown RBP7.09□□□□□ -1.27
CDC43YGL155W CHC1P22137 1653 aaKnown RBP7.07□□□□□ -1.28
CDC43YGL155W DMA1P38823 416 aa7.07□□□□□ -1.28
CDC43YGL155W SRC1Q03707 834 aa7.07□□□□□ -1.28
CDC43YGL155W YDR344CQ05510 147 aa7.07□□□□□ -1.28
CDC43YGL155W DCW1P36091 449 aa7.06□□□□□ -1.28
CDC43YGL155W SET1P38827 1080 aaKnown RBP7.06□□□□□ -1.28
CDC43YGL155W ORC1P54784 914 aaPredicted RBP7.06□□□□□ -1.28
CDC43YGL155W GRE2Q12068 342 aaKnown RBP7.06□□□□□ -1.28
CDC43YGL155W LTE1P07866 1435 aa7.06□□□□□ -1.28
CDC43YGL155W RAV1P47104 1357 aa7.05□□□□□ -1.28
CDC43YGL155W TY3B-IQ7LHG5 1498 aaKnown RBP7.04□□□□□ -1.28
CDC43YGL155W RTC1Q08281 1341 aa7.04□□□□□ -1.28
CDC43YGL155W ESL2P36168 1195 aa7.04□□□□□ -1.28
CDC43YGL155W LEU3P08638 886 aa7.03□□□□□ -1.28
CDC43YGL155W ABP1P15891 592 aaKnown RBP7.03□□□□□ -1.28
CDC43YGL155W PRS1P32895 427 aaKnown RBP7.03□□□□□ -1.28
CDC43YGL155W ATH1P48016 1211 aa7.02□□□□□ -1.29
CDC43YGL155W PDS5Q04264 1277 aa7.02□□□□□ -1.29
CDC43YGL155W NOP53Q12080 455 aaKnown RBP7.02□□□□□ -1.29
CDC43YGL155W HTA1P04911 132 aaKnown RBP7.01□□□□□ -1.29
CDC43YGL155W HTA2P04912 132 aa7.01□□□□□ -1.29
CDC43YGL155W GUT1P32190 709 aa7.01□□□□□ -1.29
CDC43YGL155W TAF5P38129 798 aa7.01□□□□□ -1.29
CDC43YGL155W YLR419WQ06698 1435 aaKnown RBP7.01□□□□□ -1.29
CDC43YGL155W SOL3P38858 249 aa7□□□□□ -1.29
CDC43YGL155W NST1P53935 1240 aa7□□□□□ -1.29
CDC43YGL155W TRM3Q07527 1436 aa7□□□□□ -1.29
CDC43YGL155W DOP1Q03921 1698 aa7□□□□□ -1.29
CDC43YGL155W PTC4P38089 393 aa6.99□□□□□ -1.29
CDC43YGL155W NUP188P52593 1655 aaKnown RBP6.98□□□□□ -1.29
CDC43YGL155W DRS2P39524 1355 aa6.97□□□□□ -1.29
CDC43YGL155W VMR1P38735 1592 aa6.97□□□□□ -1.29
CDC43YGL155W YEL023CP39992 682 aa6.97□□□□□ -1.29
CDC43YGL155W IML1P47170 1584 aa6.97□□□□□ -1.29
CDC43YGL155W KIP3P53086 805 aaKnown RBP6.97□□□□□ -1.29
CDC43YGL155W URN1Q06525 465 aaKnown RBP6.97□□□□□ -1.29
CDC43YGL155W PDR11P40550 1411 aa6.94□□□□□ -1.3
CDC43YGL155W ILV3P39522 585 aaKnown RBP6.93□□□□□ -1.3
CDC43YGL155W YGR273CP53329 174 aa6.92□□□□□ -1.3
CDC43YGL155W YPR148CQ06523 435 aa6.92□□□□□ -1.3
CDC43YGL155W DNF2Q12675 1612 aa6.91□□□□□ -1.3
CDC43YGL155W RPP0P05317 312 aaKnown RBP6.91□□□□□ -1.3
CDC43YGL155W SPE2P21182 396 aa6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms