RNA–Protein interactions for RNA: YFR051C

RET2, Transcript of Delta subunit of the coatomer complex (COPI), yeast

Gene RET2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET2	YFR051C	REB1	P21538	810 aa		13.8	□□□□□ -0.2
RET2	YFR051C	RRP5	Q05022	1729 aa	Known RBP	13.8	□□□□□ -0.2
RET2	YFR051C	TY4B-H	P0C2J7	1802 aa		13.79	□□□□□ -0.2
RET2	YFR051C	TY4B-J	P47024	1803 aa		13.79	□□□□□ -0.2
RET2	YFR051C	PSK1	P31374	1356 aa		13.77	□□□□□ -0.2
RET2	YFR051C	ENT1	Q12518	454 aa		13.75	□□□□□ -0.21
RET2	YFR051C	CHZ1	P40019	153 aa	Predicted RBP	13.74	□□□□□ -0.21
RET2	YFR051C	YRF1-2	P40105	1681 aa		13.74	□□□□□ -0.21
RET2	YFR051C	PRP45	P28004	379 aa	Predicted RBP	13.73	□□□□□ -0.21
RET2	YFR051C	SCT1	P32784	759 aa		13.71	□□□□□ -0.22
RET2	YFR051C	YIL055C	P40523	627 aa	Known RBP	13.71	□□□□□ -0.22
RET2	YFR051C	ADE6	P38972	1358 aa	Known RBP	13.7	□□□□□ -0.22
RET2	YFR051C	ENV9	Q08651	330 aa		13.7	□□□□□ -0.22
RET2	YFR051C	PRP5	P21372	849 aa	Predicted RBP	13.66	□□□□□ -0.22
RET2	YFR051C	LEU2	P04173	364 aa	Predicted RBP	13.64	□□□□□ -0.23
RET2	YFR051C	GLN1	P32288	370 aa	Known RBP	13.64	□□□□□ -0.23
RET2	YFR051C	IMH1	Q06704	911 aa	Known RBP	13.64	□□□□□ -0.23
RET2	YFR051C	MTR4	P47047	1073 aa	Known RBP	13.63	□□□□□ -0.23
RET2	YFR051C	CSE4	P36012	229 aa		13.61	□□□□□ -0.23
RET2	YFR051C	POL5	P39985	1022 aa	Known RBP	13.61	□□□□□ -0.23
RET2	YFR051C	MLP1	Q02455	1875 aa	Known RBP	13.59	□□□□□ -0.23
RET2	YFR051C	YML133C	Q03099	1374 aa		13.59	□□□□□ -0.23
RET2	YFR051C	YLL067C	Q07888	1374 aa		13.59	□□□□□ -0.23
RET2	YFR051C	YLL066C	Q99208	1374 aa		13.59	□□□□□ -0.23
RET2	YFR051C	RPS24A	P0CX31	135 aa	Known RBP	13.59	□□□□□ -0.23
RET2	YFR051C	RPS24B	P0CX32	135 aa	Known RBP	13.59	□□□□□ -0.23
RET2	YFR051C	MSB3	P48566	633 aa	Predicted RBP	13.59	□□□□□ -0.23
RET2	YFR051C	PRP43	P53131	767 aa	Known RBP	13.56	□□□□□ -0.24
RET2	YFR051C	FKH1	P40466	484 aa		13.53	□□□□□ -0.24
RET2	YFR051C	YMR074C	Q04773	145 aa		13.53	□□□□□ -0.24
RET2	YFR051C	MHP1	P43638	1398 aa		13.53	□□□□□ -0.24
RET2	YFR051C	TCB1	Q12466	1186 aa		13.52	□□□□□ -0.25
RET2	YFR051C	URB1	P34241	1764 aa	Known RBP	13.51	□□□□□ -0.25
RET2	YFR051C	YIL177C	P40434	1758 aa		13.5	□□□□□ -0.25
RET2	YFR051C	YJL225C	P40889	1758 aa		13.5	□□□□□ -0.25
RET2	YFR051C	RTG3	P38165	486 aa		13.5	□□□□□ -0.25
RET2	YFR051C	SLM3	Q12093	417 aa		13.5	□□□□□ -0.25
RET2	YFR051C	LEU3	P08638	886 aa		13.5	□□□□□ -0.25
RET2	YFR051C	RSF2	P46974	1380 aa		13.47	□□□□□ -0.25
RET2	YFR051C	IES2	P40154	320 aa		13.47	□□□□□ -0.25
RET2	YFR051C	FKS3	Q04952	1785 aa		13.46	□□□□□ -0.25
RET2	YFR051C	PDI1	P17967	522 aa	Known RBP	13.46	□□□□□ -0.25
RET2	YFR051C	PDS5	Q04264	1277 aa		13.46	□□□□□ -0.25
RET2	YFR051C	RTF1	P53064	558 aa		13.46	□□□□□ -0.26
RET2	YFR051C	DPS1	P04802	557 aa	Known RBP	13.44	□□□□□ -0.26
RET2	YFR051C	GAS4	Q08271	471 aa		13.44	□□□□□ -0.26
RET2	YFR051C	APC1	P53886	1748 aa		13.43	□□□□□ -0.26
RET2	YFR051C	ENP1	P38333	483 aa	Known RBP	13.42	□□□□□ -0.26
RET2	YFR051C	XKS1	P42826	600 aa		13.41	□□□□□ -0.26
RET2	YFR051C	ROM2	P51862	1356 aa	Known RBP	13.4	□□□□□ -0.26
RET2	YFR051C	YRF1-3	P0CX14	1859 aa		13.4	□□□□□ -0.26
RET2	YFR051C	YRF1-7	P0CX15	1859 aa		13.4	□□□□□ -0.26
RET2	YFR051C	YRF1-6	P53819	1859 aa		13.4	□□□□□ -0.26
RET2	YFR051C	BUD31	P25337	157 aa	Predicted RBP	13.39	□□□□□ -0.27
RET2	YFR051C	DOT5	P40553	215 aa		13.38	□□□□□ -0.27
RET2	YFR051C	TAP42	Q04372	366 aa		13.37	□□□□□ -0.27
RET2	YFR051C	PRI1	P10363	409 aa		13.36	□□□□□ -0.27
RET2	YFR051C	AUS1	Q08409	1394 aa		13.36	□□□□□ -0.27
RET2	YFR051C	GRX4	P32642	244 aa		13.35	□□□□□ -0.27
RET2	YFR051C	YKL133C	P36066	463 aa		13.34	□□□□□ -0.27
RET2	YFR051C	RPN11	P43588	306 aa	Known RBP	13.34	□□□□□ -0.27
RET2	YFR051C	FOX2	Q02207	900 aa	Known RBP	13.34	□□□□□ -0.27
RET2	YFR051C	UBP1	P25037	809 aa		13.33	□□□□□ -0.28
RET2	YFR051C	HIM1	Q06674	414 aa		13.33	□□□□□ -0.28
RET2	YFR051C	SEC3	P33332	1336 aa	Known RBP	13.33	□□□□□ -0.28
RET2	YFR051C	KAR2	P16474	682 aa	Known RBP	13.31	□□□□□ -0.28
RET2	YFR051C	YEF3	P16521	1044 aa	Known RBP	13.3	□□□□□ -0.28
RET2	YFR051C	YJL181W	P46987	611 aa		13.28	□□□□□ -0.28
RET2	YFR051C	YRF1-4	O13559	1382 aa		13.28	□□□□□ -0.28
RET2	YFR051C	SIR4	P11978	1358 aa		13.27	□□□□□ -0.29
RET2	YFR051C	EDE1	P34216	1381 aa		13.27	□□□□□ -0.29
RET2	YFR051C	SNF2	P22082	1703 aa		13.27	□□□□□ -0.29
RET2	YFR051C	RCR1	P38212	213 aa		13.27	□□□□□ -0.29
RET2	YFR051C	LAM6	Q08001	693 aa		13.27	□□□□□ -0.29
RET2	YFR051C	COB	P00163	385 aa		13.26	□□□□□ -0.29
RET2	YFR051C	NST1	P53935	1240 aa		13.26	□□□□□ -0.29
RET2	YFR051C	MEC3	Q02574	474 aa		13.25	□□□□□ -0.29
RET2	YFR051C	PRP40	P33203	583 aa	Known RBP	13.24	□□□□□ -0.29
RET2	YFR051C	FRK1	Q03002	865 aa	Predicted RBP	13.24	□□□□□ -0.29
RET2	YFR051C	RPO41	P13433	1351 aa	Known RBP	13.23	□□□□□ -0.29
RET2	YFR051C	PSD2	P53037	1138 aa	Known RBP	13.22	□□□□□ -0.29
RET2	YFR051C	PAP2	P53632	584 aa	Known RBP	13.22	□□□□□ -0.29
RET2	YFR051C	TRK1	P12685	1235 aa		13.21	□□□□□ -0.29
RET2	YFR051C	NPR2	P39923	615 aa		13.21	□□□□□ -0.29
RET2	YFR051C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	13.21	□□□□□ -0.3	not detected
RET2	YFR051C	ADE16	P54113	591 aa	Known RBP	13.21	□□□□□ -0.3
RET2	YFR051C	YKR075C	P36155	307 aa		13.2	□□□□□ -0.3
RET2	YFR051C	LYS4	P49367	693 aa	Predicted RBP	13.17	□□□□□ -0.3
RET2	YFR051C	ATG13	Q06628	738 aa		13.16	□□□□□ -0.3
RET2	YFR051C	YBL086C	P38177	466 aa		13.15	□□□□□ -0.3
RET2	YFR051C	RIM15	P43565	1770 aa		13.15	□□□□□ -0.3
RET2	YFR051C	HSP104	P31539	908 aa	Known RBP	13.13	□□□□□ -0.31
RET2	YFR051C	DSD1	P53095	428 aa		13.13	□□□□□ -0.31
RET2	YFR051C	INP54	Q08227	384 aa	Known RBP	13.13	□□□□□ -0.31
RET2	YFR051C	AKL1	P38080	1108 aa	Known RBP	13.11	□□□□□ -0.31
RET2	YFR051C	SPT7	P35177	1332 aa		13.11	□□□□□ -0.31
RET2	YFR051C	ALD2	P47771	506 aa		13.1	□□□□□ -0.31
RET2	YFR051C	UGA2	P38067	497 aa		13.1	□□□□□ -0.31
RET2	YFR051C	OSM1	P21375	501 aa	Known RBP	13.09	□□□□□ -0.31
RET2	YFR051C	GTT3	P39996	337 aa		13.09	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms