RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W RRP15Q06511 250 aaPredicted RBP5.43□□□□□ -1.54
PTR3YFR029W YPR204WQ08995 1032 aa5.43□□□□□ -1.54
PTR3YFR029W KEX1P09620 729 aa5.43□□□□□ -1.54
PTR3YFR029W RTG2P32608 588 aaKnown RBP5.43□□□□□ -1.54
PTR3YFR029W ORC6P38826 435 aa5.43□□□□□ -1.54
PTR3YFR029W ITT1Q04638 464 aa5.43□□□□□ -1.54
PTR3YFR029W PCS60P38137 543 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
PTR3YFR029W FPR4Q06205 392 aaPredicted RBP5.42□□□□□ -1.54
PTR3YFR029W NMD2P38798 1089 aaKnown RBP5.41□□□□□ -1.54
PTR3YFR029W RNH70P53331 553 aa5.41□□□□□ -1.54
PTR3YFR029W ZDS1P50111 915 aaKnown RBP5.41□□□□□ -1.54
PTR3YFR029W MRX10Q05648 414 aa5.41□□□□□ -1.54
PTR3YFR029W ATE1P16639 503 aa5.4□□□□□ -1.54
PTR3YFR029W TOM20P35180 183 aa5.4□□□□□ -1.54
PTR3YFR029W YBL036CP38197 257 aa5.4□□□□□ -1.54
PTR3YFR029W RPL34BP40525 121 aaKnown RBP5.4□□□□□ -1.54
PTR3YFR029W YNL108CP53929 270 aa5.4□□□□□ -1.55
PTR3YFR029W SOL3P38858 249 aa5.39□□□□□ -1.55
PTR3YFR029W PMC1P38929 1173 aaPredicted RBP5.39□□□□□ -1.55
PTR3YFR029W TEA1P47988 759 aa5.38□□□□□ -1.55
PTR3YFR029W RGR1P19263 1082 aa5.38□□□□□ -1.55
PTR3YFR029W CSE4P36012 229 aa5.38□□□□□ -1.55
PTR3YFR029W MAG2Q06436 670 aaKnown RBP5.38□□□□□ -1.55
PTR3YFR029W ENO1P00924 437 aaKnown RBP5.37□□□□□ -1.55
PTR3YFR029W NNF1P47149 201 aa5.37□□□□□ -1.55
PTR3YFR029W YGR273CP53329 174 aa5.37□□□□□ -1.55
PTR3YFR029W NIS1P53939 407 aa5.37□□□□□ -1.55
PTR3YFR029W ISW1P38144 1129 aa5.36□□□□□ -1.55
PTR3YFR029W HST2P53686 357 aa5.36□□□□□ -1.55
PTR3YFR029W RAD59Q12223 238 aa5.36□□□□□ -1.55
PTR3YFR029W ENO2P00925 437 aaKnown RBP5.36□□□□□ -1.55
PTR3YFR029W TSR4P25040 408 aa5.36□□□□□ -1.55
PTR3YFR029W RIM21P48565 533 aa5.36□□□□□ -1.55
PTR3YFR029W NST1P53935 1240 aa5.36□□□□□ -1.55
PTR3YFR029W PEP12P32854 288 aa5.35□□□□□ -1.55
PTR3YFR029W GAP1P19145 602 aaPredicted RBP5.35□□□□□ -1.55
PTR3YFR029W YDJ1P25491 409 aaKnown RBP5.35□□□□□ -1.55
PTR3YFR029W TGL4P36165 910 aa5.35□□□□□ -1.55
PTR3YFR029W FPK1P53739 893 aa5.35□□□□□ -1.55
PTR3YFR029W PIB1Q06651 286 aa5.35□□□□□ -1.55
PTR3YFR029W GUT1P32190 709 aa5.34□□□□□ -1.55
PTR3YFR029W RAD54P32863 898 aa5.34□□□□□ -1.55
PTR3YFR029W YOL098CQ12496 1037 aa5.34□□□□□ -1.55
PTR3YFR029W TRL1P09880 827 aaKnown RBP5.33□□□□□ -1.56
PTR3YFR029W RPA135P22138 1203 aaKnown RBP5.33□□□□□ -1.56
PTR3YFR029W RSC30P38781 883 aa5.33□□□□□ -1.56
PTR3YFR029W STM1P39015 273 aaKnown RBP5.33□□□□□ -1.56
PTR3YFR029W CIT2P08679 460 aa5.33□□□□□ -1.56
PTR3YFR029W SCJ1P25303 377 aa5.33□□□□□ -1.56
PTR3YFR029W SIS2P36024 562 aa5.33□□□□□ -1.56
PTR3YFR029W MVP1P40959 511 aaKnown RBP5.33□□□□□ -1.56
PTR3YFR029W VMA1P17255 1071 aaKnown RBP5.32□□□□□ -1.56
PTR3YFR029W RDS2P19541 446 aaKnown RBP5.32□□□□□ -1.56
PTR3YFR029W YJU3P28321 313 aa5.32□□□□□ -1.56
PTR3YFR029W IOC3P43596 787 aa5.32□□□□□ -1.56
PTR3YFR029W MSC6Q08818 692 aaKnown RBP5.32□□□□□ -1.56
PTR3YFR029W WHI5Q12416 295 aa5.32□□□□□ -1.56
PTR3YFR029W STB3Q12427 513 aa5.32□□□□□ -1.56
PTR3YFR029W YBL113CQ7M4S9 792 aa5.32□□□□□ -1.56
PTR3YFR029W ESS1P22696 170 aa5.31□□□□□ -1.56
PTR3YFR029W KIC1P38692 1080 aa5.31□□□□□ -1.56
PTR3YFR029W ERP5P38819 212 aa5.31□□□□□ -1.56
PTR3YFR029W AIM21P40563 679 aa5.31□□□□□ -1.56
PTR3YFR029W YOL057WQ08225 711 aa5.31□□□□□ -1.56
PTR3YFR029W TPS3P38426 1054 aaKnown RBP5.31□□□□□ -1.56
PTR3YFR029W KIP3P53086 805 aaKnown RBP5.31□□□□□ -1.56
PTR3YFR029W BRE1Q07457 700 aaKnown RBP5.31□□□□□ -1.56
PTR3YFR029W MSB4Q12317 492 aa5.31□□□□□ -1.56
PTR3YFR029W GAL11P19659 1081 aa5.3□□□□□ -1.56
PTR3YFR029W SIT4P20604 311 aa5.3□□□□□ -1.56
PTR3YFR029W RTG1P32607 177 aa5.3□□□□□ -1.56
PTR3YFR029W NAB3P38996 802 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
PTR3YFR029W TPM2P40414 161 aa5.3□□□□□ -1.56
PTR3YFR029W POL32P47110 350 aa5.3□□□□□ -1.56
PTR3YFR029W ALG12P53730 551 aa5.3□□□□□ -1.56
PTR3YFR029W PKH3Q03306 898 aaPredicted RBP5.3□□□□□ -1.56
PTR3YFR029W PPG1P32838 368 aa5.3□□□□□ -1.56
PTR3YFR029W CLB5P30283 435 aa5.29□□□□□ -1.56
PTR3YFR029W EAP1P36041 632 aaKnown RBP5.29□□□□□ -1.56
PTR3YFR029W MDJ2P42834 146 aa5.29□□□□□ -1.56
PTR3YFR029W ATH1P48016 1211 aa5.29□□□□□ -1.56
PTR3YFR029W CWC22P53333 577 aaKnown RBP5.29□□□□□ -1.56
PTR3YFR029W GRE2Q12068 342 aaKnown RBP5.29□□□□□ -1.56
PTR3YFR029W MMP1Q12372 583 aa5.29□□□□□ -1.56
PTR3YFR029W MAK16P10962 306 aaPredicted RBP5.28□□□□□ -1.56
PTR3YFR029W SEC20P28791 383 aa5.28□□□□□ -1.56
PTR3YFR029W GRX4P32642 244 aa5.28□□□□□ -1.56
PTR3YFR029W SEC8P32855 1065 aa5.28□□□□□ -1.56
PTR3YFR029W MNN4P36044 1178 aa5.28□□□□□ -1.56
PTR3YFR029W OYE2Q03558 400 aaKnown RBP5.28□□□□□ -1.56
PTR3YFR029W NCR1Q12200 1170 aa5.28□□□□□ -1.56
PTR3YFR029W SPT5P27692 1063 aaKnown RBP5.28□□□□□ -1.56
PTR3YFR029W TOA1P32773 286 aa5.28□□□□□ -1.56
PTR3YFR029W JIP5Q06214 492 aaPredicted RBP5.28□□□□□ -1.56
PTR3YFR029W SSB1P11484 613 aaKnown RBP5.27□□□□□ -1.57
PTR3YFR029W ILV3P39522 585 aaKnown RBP5.27□□□□□ -1.57
PTR3YFR029W SSB2P40150 613 aaKnown RBP5.27□□□□□ -1.57
PTR3YFR029W CWC15Q03772 175 aaKnown RBP5.27□□□□□ -1.57
PTR3YFR029W SAM3Q08986 587 aa5.27□□□□□ -1.57
PTR3YFR029W TRP5P00931 707 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms