RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W RCM1P53972 490 aa9.85□□□□□ -0.83
PDA1YER178W CPS1P27614 576 aa9.81□□□□□ -0.84
PDA1YER178W KIP3P53086 805 aaKnown RBP9.81□□□□□ -0.84
PDA1YER178W YML133CQ03099 1374 aa9.8□□□□□ -0.84
PDA1YER178W YLL067CQ07888 1374 aa9.8□□□□□ -0.84
PDA1YER178W YLL066CQ99208 1374 aa9.8□□□□□ -0.84
PDA1YER178W SPE2P21182 396 aa9.8□□□□□ -0.84
PDA1YER178W ORC1P54784 914 aaPredicted RBP9.8□□□□□ -0.84
PDA1YER178W YAH1Q12184 172 aaKnown RBP9.8□□□□□ -0.84
PDA1YER178W REB1P21538 810 aa9.79□□□□□ -0.84
PDA1YER178W PSK1P31374 1356 aa9.77□□□□□ -0.84
PDA1YER178W MLP1Q02455 1875 aaKnown RBP9.76□□□□□ -0.85
PDA1YER178W ADE6P38972 1358 aaKnown RBP9.76□□□□□ -0.85
PDA1YER178W FKS3Q04952 1785 aa9.75□□□□□ -0.85
PDA1YER178W URB1P34241 1764 aaKnown RBP9.74□□□□□ -0.85
PDA1YER178W YRF1-3P0CX14 1859 aa9.72□□□□□ -0.85
PDA1YER178W YRF1-7P0CX15 1859 aa9.72□□□□□ -0.85
PDA1YER178W YRF1-6P53819 1859 aa9.72□□□□□ -0.85
PDA1YER178W ENT1Q12518 454 aa9.72□□□□□ -0.85
PDA1YER178W NAP1P25293 417 aaKnown RBP9.71□□□□□ -0.86
PDA1YER178W ENV9Q08651 330 aa9.69□□□□□ -0.86
PDA1YER178W YIL055CP40523 627 aaKnown RBP9.67□□□□□ -0.86
PDA1YER178W APC1P53886 1748 aa9.67□□□□□ -0.86
PDA1YER178W PRP45P28004 379 aaPredicted RBP9.66□□□□□ -0.86
PDA1YER178W GLN1P32288 370 aaKnown RBP9.66□□□□□ -0.86
PDA1YER178W CHZ1P40019 153 aaPredicted RBP9.66□□□□□ -0.86
PDA1YER178W MSB3P48566 633 aaPredicted RBP9.64□□□□□ -0.87
PDA1YER178W PRP5P21372 849 aaPredicted RBP9.62□□□□□ -0.87
PDA1YER178W PRP43P53131 767 aaKnown RBP9.62□□□□□ -0.87
PDA1YER178W RPS24AP0CX31 135 aaKnown RBP9.61□□□□□ -0.87
PDA1YER178W RPS24BP0CX32 135 aaKnown RBP9.61□□□□□ -0.87
PDA1YER178W FKH1P40466 484 aa9.6□□□□□ -0.87
PDA1YER178W IMH1Q06704 911 aaKnown RBP9.6□□□□□ -0.87
PDA1YER178W LEU2P04173 364 aaPredicted RBP9.58□□□□□ -0.88
PDA1YER178W CSE4P36012 229 aa9.58□□□□□ -0.88
PDA1YER178W RTG3P38165 486 aa9.58□□□□□ -0.88
PDA1YER178W AUS1Q08409 1394 aa9.58□□□□□ -0.88
PDA1YER178W MTR4P47047 1073 aaKnown RBP9.57□□□□□ -0.88
PDA1YER178W MHP1P43638 1398 aa9.57□□□□□ -0.88
PDA1YER178W NST1P53935 1240 aa9.56□□□□□ -0.88
PDA1YER178W SLM3Q12093 417 aa9.55□□□□□ -0.88
PDA1YER178W RSF2P46974 1380 aa9.54□□□□□ -0.88
PDA1YER178W YMR074CQ04773 145 aa9.53□□□□□ -0.88
PDA1YER178W SNF2P22082 1703 aa9.53□□□□□ -0.88
PDA1YER178W POL5P39985 1022 aaKnown RBP9.52□□□□□ -0.89
PDA1YER178W RIM15P43565 1770 aa9.5□□□□□ -0.89
PDA1YER178W IES2P40154 320 aa9.5□□□□□ -0.89
PDA1YER178W PDS5Q04264 1277 aa9.5□□□□□ -0.89
PDA1YER178W YEF3P16521 1044 aaKnown RBP9.49□□□□□ -0.89
PDA1YER178W DOT5P40553 215 aa9.49□□□□□ -0.89
PDA1YER178W TCB1Q12466 1186 aa9.49□□□□□ -0.89
PDA1YER178W HIM1Q06674 414 aa9.48□□□□□ -0.89
PDA1YER178W GAS4Q08271 471 aa9.48□□□□□ -0.89
PDA1YER178W XKS1P42826 600 aa9.47□□□□□ -0.89
PDA1YER178W FOX2Q02207 900 aaKnown RBP9.47□□□□□ -0.89
PDA1YER178W DPS1P04802 557 aaKnown RBP9.46□□□□□ -0.9
PDA1YER178W BUD31P25337 157 aaPredicted RBP9.46□□□□□ -0.9
PDA1YER178W PRY3P47033 881 aa9.46□□□□□ -0.9
PDA1YER178W PDI1P17967 522 aaKnown RBP9.43□□□□□ -0.9
PDA1YER178W TAP42Q04372 366 aa9.43□□□□□ -0.9
PDA1YER178W ROM2P51862 1356 aaKnown RBP9.42□□□□□ -0.9
PDA1YER178W TRK1P12685 1235 aa9.42□□□□□ -0.9
PDA1YER178W RPN11P43588 306 aaKnown RBP9.42□□□□□ -0.9
PDA1YER178W PRI1P10363 409 aa9.41□□□□□ -0.9
PDA1YER178W SIR4P11978 1358 aa9.4□□□□□ -0.9
PDA1YER178W SEC3P33332 1336 aaKnown RBP9.4□□□□□ -0.9
PDA1YER178W RCR1P38212 213 aa9.4□□□□□ -0.9
PDA1YER178W NPR2P39923 615 aa9.4□□□□□ -0.9
PDA1YER178W YRF1-4O13559 1382 aa9.39□□□□□ -0.91
PDA1YER178W YKL133CP36066 463 aa9.39□□□□□ -0.91
PDA1YER178W YKR075CP36155 307 aa9.39□□□□□ -0.91
PDA1YER178W PSD2P53037 1138 aaKnown RBP9.39□□□□□ -0.91
PDA1YER178W COBP00163 385 aa9.37□□□□□ -0.91
PDA1YER178W LEU3P08638 886 aa9.37□□□□□ -0.91
PDA1YER178W RTF1P53064 558 aa9.37□□□□□ -0.91
PDA1YER178W ADE16P54113 591 aaKnown RBP9.37□□□□□ -0.91
PDA1YER178W FRK1Q03002 865 aaPredicted RBP9.36□□□□□ -0.91
PDA1YER178W GRX4P32642 244 aa9.35□□□□□ -0.91
PDA1YER178W RPO41P13433 1351 aaKnown RBP9.35□□□□□ -0.91
PDA1YER178W SCT1P32784 759 aa9.34□□□□□ -0.91
PDA1YER178W LYS4P49367 693 aaPredicted RBP9.34□□□□□ -0.91
PDA1YER178W RRP46P53256 223 aaPredicted RBP9.34□□□□□ -0.91
PDA1YER178W AAD16Q02895 342 aa9.34□□□□□ -0.91
PDA1YER178W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
PDA1YER178W KAR2P16474 682 aaKnown RBP9.32□□□□□ -0.92
PDA1YER178W CTH1P47976 325 aa9.32□□□□□ -0.92
PDA1YER178W INP54Q08227 384 aaKnown RBP9.31□□□□□ -0.92
PDA1YER178W SPT7P35177 1332 aa9.31□□□□□ -0.92
PDA1YER178W ENP1P38333 483 aaKnown RBP9.3□□□□□ -0.92
PDA1YER178W NUP145P49687 1317 aa9.28□□□□□ -0.92
PDA1YER178W YBL086CP38177 466 aa9.27□□□□□ -0.93
PDA1YER178W DSD1P53095 428 aa9.27□□□□□ -0.93
PDA1YER178W UTP10P42945 1769 aaKnown RBP9.27□□□□□ -0.93
PDA1YER178W EDE1P34216 1381 aa9.26□□□□□ -0.93
PDA1YER178W OSM1P21375 501 aaKnown RBP9.25□□□□□ -0.93
PDA1YER178W UBP1P25037 809 aa9.25□□□□□ -0.93
PDA1YER178W AKL1P38080 1108 aaKnown RBP9.25□□□□□ -0.93
PDA1YER178W MEC3Q02574 474 aa9.24□□□□□ -0.93
PDA1YER178W HSP104P31539 908 aaKnown RBP9.23□□□□□ -0.93
PDA1YER178W PAP2P53632 584 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms