RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C KEX2P13134 814 aa9.24□□□□□ -0.93
TCA17YEL048C SIT4P20604 311 aa9.21□□□□□ -0.94
TCA17YEL048C RTF1P53064 558 aa9.21□□□□□ -0.94
TCA17YEL048C FPK1P53739 893 aa9.21□□□□□ -0.94
TCA17YEL048C KIN1P13185 1064 aa9.2□□□□□ -0.94
TCA17YEL048C YNL115CP53925 644 aa9.2□□□□□ -0.94
TCA17YEL048C TY1A-DR4O74302 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-HP0C2I4 478 aaKnown RBP9.19□□□□□ -0.94
TCA17YEL048C TY1A-AP0CX57 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-PR1P0CX58 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-ORP0CX59 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-PR2P0CX60 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-DR5P0CX65 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-ER2P0CX66 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-GR3P0CX67 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-LR1P0CX68 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-MR2P0CX69 440 aa9.19□□□□□ -0.94
TCA17YEL048C PAT1P25644 796 aaKnown RBP9.19□□□□□ -0.94
TCA17YEL048C MRF1P30775 413 aaPredicted RBP9.19□□□□□ -0.94
TCA17YEL048C TY1A-JR2P47099 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-DR1Q03856 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-ML1Q04706 440 aaKnown RBP9.19□□□□□ -0.94
TCA17YEL048C TY1A-BRQ12217 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-NL2Q12470 440 aa9.19□□□□□ -0.94
TCA17YEL048C TY1A-GR2Q12485 440 aa9.19□□□□□ -0.94
TCA17YEL048C SEC2P17065 759 aa9.18□□□□□ -0.94
TCA17YEL048C SPT16P32558 1035 aaKnown RBP9.18□□□□□ -0.94
TCA17YEL048C ERF2Q06551 359 aa9.18□□□□□ -0.94
TCA17YEL048C SLY41P22215 453 aa9.14□□□□□ -0.95
TCA17YEL048C GLN1P32288 370 aaKnown RBP9.14□□□□□ -0.95
TCA17YEL048C RRN7P40992 514 aa9.14□□□□□ -0.95
TCA17YEL048C HST2P53686 357 aa9.14□□□□□ -0.95
TCA17YEL048C DPS1P04802 557 aaKnown RBP9.13□□□□□ -0.95
TCA17YEL048C MMP1Q12372 583 aa9.13□□□□□ -0.95
TCA17YEL048C ERG12P07277 443 aa9.12□□□□□ -0.95
TCA17YEL048C CSN12P47130 423 aa9.11□□□□□ -0.95
TCA17YEL048C YEL077CQ3E7X8 1277 aa9.11□□□□□ -0.95
TCA17YEL048C SCJ1P25303 377 aa9.1□□□□□ -0.95
TCA17YEL048C LEO1P38439 464 aa9.1□□□□□ -0.95
TCA17YEL048C TUB4P53378 473 aa9.08□□□□□ -0.96
TCA17YEL048C TYW1Q08960 810 aaKnown RBP9.08□□□□□ -0.96
TCA17YEL048C SDH2P21801 266 aa9.06□□□□□ -0.96
TCA17YEL048C ESS1P22696 170 aa9.06□□□□□ -0.96
TCA17YEL048C AMS1P22855 1083 aa9.05□□□□□ -0.96
TCA17YEL048C TBF1Q02457 562 aa9.05□□□□□ -0.96
TCA17YEL048C AGE1Q04412 482 aa9.05□□□□□ -0.96
TCA17YEL048C SSA2P10592 639 aaKnown RBP9.04□□□□□ -0.96
TCA17YEL048C PAC1P39946 494 aaKnown RBP9.04□□□□□ -0.96
TCA17YEL048C PUS6P53294 404 aa9.04□□□□□ -0.96
TCA17YEL048C PKH3Q03306 898 aaPredicted RBP9.02□□□□□ -0.97
TCA17YEL048C RAS1P01119 309 aa9.01□□□□□ -0.97
TCA17YEL048C KTR1P27810 393 aaKnown RBP9.01□□□□□ -0.97
TCA17YEL048C GUA1P38625 525 aaKnown RBP9□□□□□ -0.97
TCA17YEL048C KXD1P53158 218 aa9□□□□□ -0.97
TCA17YEL048C TRM1P15565 570 aaKnown RBP8.99□□□□□ -0.97
TCA17YEL048C YJU3P28321 313 aa8.99□□□□□ -0.97
TCA17YEL048C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97not detected
TCA17YEL048C LAM6Q08001 693 aa8.98□□□□□ -0.97
TCA17YEL048C FRK1Q03002 865 aaPredicted RBP8.97□□□□□ -0.97
TCA17YEL048C ARG8P18544 423 aa8.96□□□□□ -0.98
TCA17YEL048C YDL206WQ12424 762 aa8.96□□□□□ -0.98
TCA17YEL048C CST6P40535 587 aa8.95□□□□□ -0.98
TCA17YEL048C BDP1P46678 594 aa8.95□□□□□ -0.98
TCA17YEL048C RPA14P50106 137 aa8.94□□□□□ -0.98
TCA17YEL048C ALR1Q08269 859 aa8.94□□□□□ -0.98
TCA17YEL048C HPC2Q01448 625 aa8.92□□□□□ -0.98
TCA17YEL048C RAD59Q12223 238 aa8.92□□□□□ -0.98
TCA17YEL048C PDC1P06169 563 aaKnown RBP8.91□□□□□ -0.98
TCA17YEL048C MOD5P07884 428 aa8.91□□□□□ -0.98
TCA17YEL048C HXT10P43581 546 aa8.91□□□□□ -0.98
TCA17YEL048C BRL1P38770 471 aa8.9□□□□□ -0.98
TCA17YEL048C RSC30P38781 883 aa8.9□□□□□ -0.98
TCA17YEL048C YPR097WQ06839 1073 aa8.9□□□□□ -0.98
TCA17YEL048C TPD3P31383 635 aa8.88□□□□□ -0.99
TCA17YEL048C RRD1P40454 393 aaKnown RBP8.87□□□□□ -0.99
TCA17YEL048C HGH1P48362 394 aaKnown RBP8.86□□□□□ -0.99
TCA17YEL048C PUS5Q06244 254 aa8.85□□□□□ -0.99
TCA17YEL048C TFB3Q03290 321 aa8.84□□□□□ -0.99
TCA17YEL048C HED1Q03937 162 aa8.83□□□□□ -1
TCA17YEL048C KIP2P28743 706 aa8.8□□□□□ -1
TCA17YEL048C CLA4P48562 842 aa8.8□□□□□ -1
TCA17YEL048C SYH1Q02875 849 aaKnown RBP8.8□□□□□ -1
TCA17YEL048C TRK1P12685 1235 aa8.79□□□□□ -1
TCA17YEL048C YBL036CP38197 257 aa8.79□□□□□ -1
TCA17YEL048C CSE4P36012 229 aa8.78□□□□□ -1
TCA17YEL048C AIR1P40507 360 aaKnown RBP8.78□□□□□ -1
TCA17YEL048C SRC1Q03707 834 aa8.78□□□□□ -1
TCA17YEL048C CDC4P07834 779 aa8.76□□□□□ -1.01
TCA17YEL048C MAK16P10962 306 aaPredicted RBP8.76□□□□□ -1.01
TCA17YEL048C IXR1P33417 597 aa8.76□□□□□ -1.01
TCA17YEL048C PKC1P24583 1151 aa8.75□□□□□ -1.01
TCA17YEL048C VAC17P25591 423 aa8.73□□□□□ -1.01
TCA17YEL048C TEC1P18412 486 aa8.7□□□□□ -1.02
TCA17YEL048C SPT5P27692 1063 aaKnown RBP8.7□□□□□ -1.02
TCA17YEL048C NAF1P53919 492 aaKnown RBP8.7□□□□□ -1.02
TCA17YEL048C FIG4P42837 879 aa8.69□□□□□ -1.02
TCA17YEL048C HST3P53687 447 aa8.69□□□□□ -1.02
TCA17YEL048C DMA2P53924 522 aa8.69□□□□□ -1.02
TCA17YEL048C MET32Q12041 191 aa8.69□□□□□ -1.02
TCA17YEL048C YJL007CP47080 104 aa8.67□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms