RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W TY1A-LR1P0CX68 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-MR2P0CX69 440 aa7.8□□□□□ -1.16
RSM28YDR494W SEC2P17065 759 aa7.8□□□□□ -1.16
RSM28YDR494W GCD11P32481 527 aaKnown RBP7.8□□□□□ -1.16
RSM28YDR494W TY1A-JR2P47099 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-DR1Q03856 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-ML1Q04706 440 aaKnown RBP7.8□□□□□ -1.16
RSM28YDR494W TY1A-BRQ12217 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-NL2Q12470 440 aa7.8□□□□□ -1.16
RSM28YDR494W TY1A-GR2Q12485 440 aa7.8□□□□□ -1.16
RSM28YDR494W YEL077CQ3E7X8 1277 aa7.79□□□□□ -1.16
RSM28YDR494W SPB4P25808 606 aaPredicted RBP7.78□□□□□ -1.16
RSM28YDR494W NUP42P49686 430 aaKnown RBP7.77□□□□□ -1.17
RSM28YDR494W CLB5P30283 435 aa7.74□□□□□ -1.17
RSM28YDR494W ERG12P07277 443 aa7.73□□□□□ -1.17
RSM28YDR494W KEX2P13134 814 aa7.73□□□□□ -1.17
RSM28YDR494W SPT16P32558 1035 aaKnown RBP7.72□□□□□ -1.17
RSM28YDR494W ERF2Q06551 359 aa7.72□□□□□ -1.17
RSM28YDR494W DIT2P21595 489 aa7.71□□□□□ -1.18
RSM28YDR494W RRN7P40992 514 aa7.7□□□□□ -1.18
RSM28YDR494W CST6P40535 587 aa7.69□□□□□ -1.18
RSM28YDR494W TRK1P12685 1235 aa7.68□□□□□ -1.18
RSM28YDR494W PAT1P25644 796 aaKnown RBP7.68□□□□□ -1.18
RSM28YDR494W TEA1P47988 759 aa7.67□□□□□ -1.18
RSM28YDR494W LAM6Q08001 693 aa7.66□□□□□ -1.18
RSM28YDR494W SIT4P20604 311 aa7.64□□□□□ -1.19
RSM28YDR494W RTF1P53064 558 aa7.64□□□□□ -1.19
RSM28YDR494W NIS1P53939 407 aa7.63□□□□□ -1.19
RSM28YDR494W RQC2Q12532 1038 aaKnown RBP7.63□□□□□ -1.19
RSM28YDR494W YNL115CP53925 644 aa7.62□□□□□ -1.19
RSM28YDR494W AGE1Q04412 482 aa7.62□□□□□ -1.19
RSM28YDR494W PAC1P39946 494 aaKnown RBP7.61□□□□□ -1.19
RSM28YDR494W BDP1P46678 594 aa7.61□□□□□ -1.19
RSM28YDR494W TUB4P53378 473 aa7.61□□□□□ -1.19
RSM28YDR494W FRK1Q03002 865 aaPredicted RBP7.61□□□□□ -1.19
RSM28YDR494W CLA4P48562 842 aa7.6□□□□□ -1.19
RSM28YDR494W AIR1P40507 360 aaKnown RBP7.58□□□□□ -1.2
RSM28YDR494W MOD5P07884 428 aa7.57□□□□□ -1.2
RSM28YDR494W FPK1P53739 893 aa7.56□□□□□ -1.2
RSM28YDR494W YNR021WP53723 404 aaKnown RBP7.54□□□□□ -1.2
RSM28YDR494W HED1Q03937 162 aa7.53□□□□□ -1.2
RSM28YDR494W YMR196WQ04336 1088 aa7.53□□□□□ -1.2
RSM28YDR494W SLY41P22215 453 aa7.52□□□□□ -1.21
RSM28YDR494W ATF2P53296 535 aa7.52□□□□□ -1.21
RSM28YDR494W CDC4P07834 779 aa7.51□□□□□ -1.21
RSM28YDR494W GLC3P32775 704 aa7.49□□□□□ -1.21
RSM28YDR494W HST2P53686 357 aa7.49□□□□□ -1.21
RSM28YDR494W BRE2P43132 505 aa7.48□□□□□ -1.21
RSM28YDR494W SCJ1P25303 377 aa7.47□□□□□ -1.21
RSM28YDR494W KXD1P53158 218 aa7.47□□□□□ -1.21
RSM28YDR494W PUS5Q06244 254 aa7.47□□□□□ -1.21
RSM28YDR494W TPD3P31383 635 aa7.46□□□□□ -1.22
RSM28YDR494W PUS6P53294 404 aa7.45□□□□□ -1.22
RSM28YDR494W GCR2Q01722 534 aa7.45□□□□□ -1.22
RSM28YDR494W PDC1P06169 563 aaKnown RBP7.44□□□□□ -1.22
RSM28YDR494W HXT10P43581 546 aa7.44□□□□□ -1.22
RSM28YDR494W MMP1Q12372 583 aa7.44□□□□□ -1.22
RSM28YDR494W GLN1P32288 370 aaKnown RBP7.42□□□□□ -1.22
RSM28YDR494W RRD1P40454 393 aaKnown RBP7.42□□□□□ -1.22
RSM28YDR494W TBF1Q02457 562 aa7.42□□□□□ -1.22
RSM28YDR494W MET32Q12041 191 aa7.42□□□□□ -1.22
RSM28YDR494W AIM7Q12156 149 aa7.42□□□□□ -1.22
RSM28YDR494W TRM1P15565 570 aaKnown RBP7.41□□□□□ -1.22
RSM28YDR494W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
RSM28YDR494W RPA14P50106 137 aa7.41□□□□□ -1.22
RSM28YDR494W YDL206WQ12424 762 aa7.41□□□□□ -1.22
RSM28YDR494W ALR1Q08269 859 aa7.4□□□□□ -1.22
RSM28YDR494W ESS1P22696 170 aa7.39□□□□□ -1.23
RSM28YDR494W YPR097WQ06839 1073 aa7.39□□□□□ -1.23
RSM28YDR494W AFT1P22149 690 aa7.38□□□□□ -1.23
RSM28YDR494W ASH1P34233 588 aa7.38□□□□□ -1.23
RSM28YDR494W TYW1Q08960 810 aaKnown RBP7.38□□□□□ -1.23
RSM28YDR494W YJU3P28321 313 aa7.36□□□□□ -1.23
RSM28YDR494W SYH1Q02875 849 aaKnown RBP7.36□□□□□ -1.23
RSM28YDR494W KTR1P27810 393 aaKnown RBP7.35□□□□□ -1.23
RSM28YDR494W RGA1P39083 1007 aa7.35□□□□□ -1.23
RSM28YDR494W HST3P53687 447 aa7.35□□□□□ -1.23
RSM28YDR494W RSC30P38781 883 aa7.33□□□□□ -1.24
RSM28YDR494W LEU3P08638 886 aa7.31□□□□□ -1.24
RSM28YDR494W KIP2P28743 706 aa7.31□□□□□ -1.24
RSM28YDR494W MET22P32179 357 aa7.31□□□□□ -1.24
RSM28YDR494W CSN12P47130 423 aa7.31□□□□□ -1.24
RSM28YDR494W PKH3Q03306 898 aaPredicted RBP7.31□□□□□ -1.24
RSM28YDR494W GAR1P28007 205 aaKnown RBP7.29□□□□□ -1.24
RSM28YDR494W ENV9Q08651 330 aa7.29□□□□□ -1.24
RSM28YDR494W IXR1P33417 597 aa7.28□□□□□ -1.24
RSM28YDR494W YJR115WP47152 169 aa7.28□□□□□ -1.24
RSM28YDR494W MSB3P48566 633 aaPredicted RBP7.27□□□□□ -1.25
RSM28YDR494W ARG8P18544 423 aa7.26□□□□□ -1.25
RSM28YDR494W YPL062WQ02781 134 aa7.26□□□□□ -1.25
RSM28YDR494W VAC17P25591 423 aa7.25□□□□□ -1.25
RSM28YDR494W MRT4P33201 236 aaKnown RBP7.25□□□□□ -1.25
RSM28YDR494W YDR444WQ04093 687 aa7.25□□□□□ -1.25
RSM28YDR494W KIN1P13185 1064 aa7.24□□□□□ -1.25
RSM28YDR494W GBP2P25555 427 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
RSM28YDR494W UGA3P26370 528 aa7.22□□□□□ -1.25
RSM28YDR494W LCB5Q06147 687 aaKnown RBP7.22□□□□□ -1.25
RSM28YDR494W RAD59Q12223 238 aa7.22□□□□□ -1.25
RSM28YDR494W RPN1P38764 993 aaKnown RBP7.2□□□□□ -1.26
RSM28YDR494W RGA2Q06407 1009 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms