RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W TY1A-NL2Q12470 440 aa7.15□□□□□ -1.26
SDC1YDR469W TY1A-GR2Q12485 440 aa7.15□□□□□ -1.26
SDC1YDR469W SEC2P17065 759 aa7.14□□□□□ -1.27
SDC1YDR469W IFH1P39520 1085 aa7.14□□□□□ -1.27
SDC1YDR469W REF2P42073 533 aaPredicted RBP7.14□□□□□ -1.27
SDC1YDR469W LAM6Q08001 693 aa7.14□□□□□ -1.27
SDC1YDR469W SPT16P32558 1035 aaKnown RBP7.13□□□□□ -1.27
SDC1YDR469W ORC6P38826 435 aa7.13□□□□□ -1.27
SDC1YDR469W GCR2Q01722 534 aa7.13□□□□□ -1.27
SDC1YDR469W FRK1Q03002 865 aaPredicted RBP7.13□□□□□ -1.27
SDC1YDR469W GBP2P25555 427 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
SDC1YDR469W RRN7P40992 514 aa7.08□□□□□ -1.28
SDC1YDR469W MVP1P40959 511 aaKnown RBP7.07□□□□□ -1.28
SDC1YDR469W YPR148CQ06523 435 aa7.07□□□□□ -1.28
SDC1YDR469W BDP1P46678 594 aa7.06□□□□□ -1.28
SDC1YDR469W CDC4P07834 779 aa7.05□□□□□ -1.28
SDC1YDR469W YPR109WQ06104 294 aa7.04□□□□□ -1.28
SDC1YDR469W VPS70P47161 811 aa7.02□□□□□ -1.29
SDC1YDR469W COX6P00427 148 aa7.01□□□□□ -1.29
SDC1YDR469W RGR1P19263 1082 aa7.01□□□□□ -1.29
SDC1YDR469W MET22P32179 357 aa7.01□□□□□ -1.29
SDC1YDR469W PAT1P25644 796 aaKnown RBP7□□□□□ -1.29
SDC1YDR469W ERF2Q06551 359 aa6.99□□□□□ -1.29
SDC1YDR469W KEX2P13134 814 aa6.98□□□□□ -1.29
SDC1YDR469W HED1Q03937 162 aa6.97□□□□□ -1.29
SDC1YDR469W MAK21Q12176 1025 aaKnown RBP6.97□□□□□ -1.29
SDC1YDR469W ENV9Q08651 330 aa6.95□□□□□ -1.3
SDC1YDR469W PAC1P39946 494 aaKnown RBP6.92□□□□□ -1.3
SDC1YDR469W YDR444WQ04093 687 aa6.92□□□□□ -1.3
SDC1YDR469W MET32Q12041 191 aa6.91□□□□□ -1.3
SDC1YDR469W ASH1P34233 588 aa6.9□□□□□ -1.3
SDC1YDR469W PUS5Q06244 254 aa6.89□□□□□ -1.31
SDC1YDR469W MOD5P07884 428 aa6.87□□□□□ -1.31
SDC1YDR469W AFT1P22149 690 aa6.85□□□□□ -1.31
SDC1YDR469W TUB4P53378 473 aa6.85□□□□□ -1.31
SDC1YDR469W HST3P53687 447 aa6.85□□□□□ -1.31
SDC1YDR469W AGE1Q04412 482 aa6.85□□□□□ -1.31
SDC1YDR469W LCB5Q06147 687 aaKnown RBP6.85□□□□□ -1.31
SDC1YDR469W YDL176WQ12027 708 aa6.83□□□□□ -1.32
SDC1YDR469W PSE1P32337 1089 aaKnown RBP6.8□□□□□ -1.32
SDC1YDR469W RRD1P40454 393 aaKnown RBP6.79□□□□□ -1.32
SDC1YDR469W YJR115WP47152 169 aa6.79□□□□□ -1.32
SDC1YDR469W PBS2P08018 668 aa6.78□□□□□ -1.32
SDC1YDR469W CLB5P30283 435 aa6.75□□□□□ -1.33
SDC1YDR469W YNL115CP53925 644 aa6.75□□□□□ -1.33
SDC1YDR469W RTF1P53064 558 aa6.74□□□□□ -1.33
SDC1YDR469W KXD1P53158 218 aa6.71□□□□□ -1.34
SDC1YDR469W CKB1P43639 278 aa6.7□□□□□ -1.34
SDC1YDR469W SIT4P20604 311 aa6.69□□□□□ -1.34
SDC1YDR469W CAF120P53836 1060 aa6.69□□□□□ -1.34
SDC1YDR469W MAM3Q12296 706 aa6.69□□□□□ -1.34
SDC1YDR469W HXT10P43581 546 aa6.68□□□□□ -1.34
SDC1YDR469W SYH1Q02875 849 aaKnown RBP6.68□□□□□ -1.34
SDC1YDR469W MSB3P48566 633 aaPredicted RBP6.67□□□□□ -1.34
SDC1YDR469W NIS1P53939 407 aa6.67□□□□□ -1.34
SDC1YDR469W TPD3P31383 635 aa6.66□□□□□ -1.34
SDC1YDR469W IES2P40154 320 aa6.66□□□□□ -1.34
SDC1YDR469W TEA1P47988 759 aa6.66□□□□□ -1.34
SDC1YDR469W PDC1P06169 563 aaKnown RBP6.65□□□□□ -1.34
SDC1YDR469W UGA3P26370 528 aa6.65□□□□□ -1.34
SDC1YDR469W PTK2P47116 818 aaKnown RBP6.63□□□□□ -1.35
SDC1YDR469W OPT2Q06593 877 aa6.63□□□□□ -1.35
SDC1YDR469W SLY41P22215 453 aa6.62□□□□□ -1.35
SDC1YDR469W ACO2P39533 789 aa6.62□□□□□ -1.35
SDC1YDR469W SRF1Q12516 437 aa6.61□□□□□ -1.35
SDC1YDR469W KIP2P28743 706 aa6.6□□□□□ -1.35
SDC1YDR469W NUP42P49686 430 aaKnown RBP6.59□□□□□ -1.35
SDC1YDR469W DSF2P38213 736 aa6.58□□□□□ -1.36
SDC1YDR469W FPK1P53739 893 aa6.58□□□□□ -1.36
SDC1YDR469W YLR346CQ06139 101 aa6.57□□□□□ -1.36
SDC1YDR469W YDL206WQ12424 762 aa6.57□□□□□ -1.36
SDC1YDR469W IXR1P33417 597 aa6.56□□□□□ -1.36
SDC1YDR469W YMR196WQ04336 1088 aa6.56□□□□□ -1.36
SDC1YDR469W TRK2P28584 889 aa6.55□□□□□ -1.36
SDC1YDR469W YIR007WP40566 764 aa6.55□□□□□ -1.36
SDC1YDR469W RPA14P50106 137 aa6.55□□□□□ -1.36
SDC1YDR469W TBF1Q02457 562 aa6.55□□□□□ -1.36
SDC1YDR469W MTC5Q03897 1148 aa6.55□□□□□ -1.36
SDC1YDR469W ALR1Q08269 859 aa6.55□□□□□ -1.36
SDC1YDR469W TYW1Q08960 810 aaKnown RBP6.55□□□□□ -1.36
SDC1YDR469W DIT2P21595 489 aa6.54□□□□□ -1.36
SDC1YDR469W YGR035CP53222 116 aa6.54□□□□□ -1.36
SDC1YDR469W PUS6P53294 404 aa6.54□□□□□ -1.36
SDC1YDR469W MRT4P33201 236 aaKnown RBP6.53□□□□□ -1.36
SDC1YDR469W GLY1P37303 387 aaKnown RBP6.53□□□□□ -1.36
SDC1YDR469W NUP85P46673 744 aa6.53□□□□□ -1.36
SDC1YDR469W YPR097WQ06839 1073 aa6.53□□□□□ -1.36
SDC1YDR469W SCJ1P25303 377 aa6.52□□□□□ -1.37
SDC1YDR469W SCW11P53189 542 aa6.51□□□□□ -1.37
SDC1YDR469W TRM1P15565 570 aaKnown RBP6.5□□□□□ -1.37
SDC1YDR469W MIP1P15801 1254 aa6.5□□□□□ -1.37
SDC1YDR469W HPF1Q05164 967 aa6.5□□□□□ -1.37
SDC1YDR469W TY1A-BLQ12266 440 aa6.5□□□□□ -1.37
SDC1YDR469W SPB4P25808 606 aaPredicted RBP6.45□□□□□ -1.38
SDC1YDR469W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
SDC1YDR469W HST2P53686 357 aa6.44□□□□□ -1.38
SDC1YDR469W RTT106P40161 455 aa6.43□□□□□ -1.38
SDC1YDR469W LSC2P53312 427 aa6.43□□□□□ -1.38
SDC1YDR469W SAS10Q12136 610 aaPredicted RBP6.43□□□□□ -1.38
SDC1YDR469W MMP1Q12372 583 aa6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms