RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W TY1A-LR1P0CX68 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-MR2P0CX69 440 aa9.12□□□□□ -0.95
RPN9YDR427W PAT1P25644 796 aaKnown RBP9.12□□□□□ -0.95
RPN9YDR427W AIR1P40507 360 aaKnown RBP9.12□□□□□ -0.95
RPN9YDR427W TY1A-JR2P47099 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-DR1Q03856 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-ML1Q04706 440 aaKnown RBP9.12□□□□□ -0.95
RPN9YDR427W TY1A-BRQ12217 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-NL2Q12470 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-GR2Q12485 440 aa9.12□□□□□ -0.95
RPN9YDR427W SEC2P17065 759 aa9.11□□□□□ -0.95
RPN9YDR427W YPL062WQ02781 134 aa9.11□□□□□ -0.95
RPN9YDR427W LAM6Q08001 693 aa9.11□□□□□ -0.95
RPN9YDR427W CLA4P48562 842 aa9.08□□□□□ -0.96
RPN9YDR427W FRK1Q03002 865 aaPredicted RBP9.08□□□□□ -0.96
RPN9YDR427W YPR109WQ06104 294 aa9.08□□□□□ -0.96
RPN9YDR427W RRN7P40992 514 aa9.07□□□□□ -0.96
RPN9YDR427W RGR1P19263 1082 aa9.06□□□□□ -0.96
RPN9YDR427W GBP2P25555 427 aaKnown RBP RIP-Chip data9.06□□□□□ -0.96not detected
RPN9YDR427W CDC4P07834 779 aa9.04□□□□□ -0.96
RPN9YDR427W GAR1P28007 205 aaKnown RBP9.04□□□□□ -0.96
RPN9YDR427W BDP1P46678 594 aa9.03□□□□□ -0.96
RPN9YDR427W HED1Q03937 162 aa8.99□□□□□ -0.97
RPN9YDR427W KEX2P13134 814 aa8.95□□□□□ -0.98
RPN9YDR427W CKB1P43639 278 aa8.93□□□□□ -0.98
RPN9YDR427W PSE1P32337 1089 aaKnown RBP8.92□□□□□ -0.98
RPN9YDR427W PBS2P08018 668 aa8.9□□□□□ -0.98
RPN9YDR427W CLB5P30283 435 aa8.9□□□□□ -0.98
RPN9YDR427W ERF2Q06551 359 aa8.9□□□□□ -0.98
RPN9YDR427W ENV9Q08651 330 aa8.9□□□□□ -0.98
RPN9YDR427W MET22P32179 357 aa8.89□□□□□ -0.99
RPN9YDR427W PAC1P39946 494 aaKnown RBP8.86□□□□□ -0.99
RPN9YDR427W MOD5P07884 428 aa8.84□□□□□ -0.99
RPN9YDR427W RTF1P53064 558 aa8.84□□□□□ -0.99
RPN9YDR427W HST3P53687 447 aa8.84□□□□□ -0.99
RPN9YDR427W YDR444WQ04093 687 aa8.84□□□□□ -0.99
RPN9YDR427W ASH1P34233 588 aa8.83□□□□□ -1
RPN9YDR427W AFT1P22149 690 aa8.82□□□□□ -1
RPN9YDR427W TUB4P53378 473 aa8.82□□□□□ -1
RPN9YDR427W MET32Q12041 191 aa8.81□□□□□ -1
RPN9YDR427W MAM3Q12296 706 aa8.81□□□□□ -1
RPN9YDR427W AGE1Q04412 482 aa8.8□□□□□ -1
RPN9YDR427W YNL115CP53925 644 aa8.78□□□□□ -1
RPN9YDR427W PUS5Q06244 254 aa8.77□□□□□ -1.01
RPN9YDR427W LCB5Q06147 687 aaKnown RBP8.76□□□□□ -1.01
RPN9YDR427W KXD1P53158 218 aa8.74□□□□□ -1.01
RPN9YDR427W TEA1P47988 759 aa8.73□□□□□ -1.01
RPN9YDR427W SIT4P20604 311 aa8.71□□□□□ -1.02
RPN9YDR427W IES2P40154 320 aa8.7□□□□□ -1.02
RPN9YDR427W TPD3P31383 635 aa8.69□□□□□ -1.02
RPN9YDR427W DSF2P38213 736 aa8.69□□□□□ -1.02
RPN9YDR427W RRD1P40454 393 aaKnown RBP8.68□□□□□ -1.02
RPN9YDR427W YJR115WP47152 169 aa8.67□□□□□ -1.02
RPN9YDR427W SYH1Q02875 849 aaKnown RBP8.67□□□□□ -1.02
RPN9YDR427W HXT10P43581 546 aa8.66□□□□□ -1.02
RPN9YDR427W MSB3P48566 633 aaPredicted RBP8.65□□□□□ -1.02
RPN9YDR427W YDL176WQ12027 708 aa8.65□□□□□ -1.02
RPN9YDR427W NIS1P53939 407 aa8.64□□□□□ -1.03
RPN9YDR427W NUP42P49686 430 aaKnown RBP8.62□□□□□ -1.03
RPN9YDR427W DMA1P38823 416 aa8.61□□□□□ -1.03
RPN9YDR427W PDC1P06169 563 aaKnown RBP8.6□□□□□ -1.03
RPN9YDR427W SLY41P22215 453 aa8.6□□□□□ -1.03
RPN9YDR427W UGA3P26370 528 aa8.6□□□□□ -1.03
RPN9YDR427W YMR196WQ04336 1088 aa8.6□□□□□ -1.03
RPN9YDR427W RQC2Q12532 1038 aaKnown RBP8.6□□□□□ -1.03
RPN9YDR427W TBF1Q02457 562 aa8.58□□□□□ -1.04
RPN9YDR427W SAS10Q12136 610 aaPredicted RBP8.58□□□□□ -1.04
RPN9YDR427W SRF1Q12516 437 aa8.57□□□□□ -1.04
RPN9YDR427W KIP2P28743 706 aa8.56□□□□□ -1.04
RPN9YDR427W FPK1P53739 893 aa8.56□□□□□ -1.04
RPN9YDR427W ALR1Q08269 859 aa8.56□□□□□ -1.04
RPN9YDR427W SPB4P25808 606 aaPredicted RBP8.55□□□□□ -1.04
RPN9YDR427W YLR346CQ06139 101 aa8.55□□□□□ -1.04
RPN9YDR427W RPA14P50106 137 aa8.54□□□□□ -1.04
RPN9YDR427W PUS6P53294 404 aa8.54□□□□□ -1.04
RPN9YDR427W DIT2P21595 489 aa8.52□□□□□ -1.05
RPN9YDR427W PTK2P47116 818 aaKnown RBP8.52□□□□□ -1.05
RPN9YDR427W YDL206WQ12424 762 aa8.52□□□□□ -1.05
RPN9YDR427W RTT106P40161 455 aa8.51□□□□□ -1.05
RPN9YDR427W CAF120P53836 1060 aa8.51□□□□□ -1.05
RPN9YDR427W YPR097WQ06839 1073 aa8.51□□□□□ -1.05
RPN9YDR427W IXR1P33417 597 aa8.5□□□□□ -1.05
RPN9YDR427W ACO2P39533 789 aa8.5□□□□□ -1.05
RPN9YDR427W OPT2Q06593 877 aa8.5□□□□□ -1.05
RPN9YDR427W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
RPN9YDR427W MRT4P33201 236 aaKnown RBP8.46□□□□□ -1.06
RPN9YDR427W TYW1Q08960 810 aaKnown RBP8.46□□□□□ -1.06
RPN9YDR427W NUP85P46673 744 aa8.45□□□□□ -1.06
RPN9YDR427W HST2P53686 357 aa8.45□□□□□ -1.06
RPN9YDR427W TRM1P15565 570 aaKnown RBP8.44□□□□□ -1.06
RPN9YDR427W GLY1P37303 387 aaKnown RBP8.43□□□□□ -1.06
RPN9YDR427W MMP1Q12372 583 aa8.42□□□□□ -1.06
RPN9YDR427W SCW11P53189 542 aa8.41□□□□□ -1.06
RPN9YDR427W MIP1P15801 1254 aa8.4□□□□□ -1.06
RPN9YDR427W SCJ1P25303 377 aa8.4□□□□□ -1.06
RPN9YDR427W YGR035CP53222 116 aa8.39□□□□□ -1.07
RPN9YDR427W TRK2P28584 889 aa8.38□□□□□ -1.07
RPN9YDR427W GLN1P32288 370 aaKnown RBP8.38□□□□□ -1.07
RPN9YDR427W MTC5Q03897 1148 aa8.38□□□□□ -1.07
RPN9YDR427W ATF2P53296 535 aa8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms