RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIZ1	YDR409W	TY1B-BR	Q12193	1756 aa		4.25	□□□□□ -1.73
SIZ1	YDR409W	TY1B-GR3	Q12316	1755 aa		4.25	□□□□□ -1.73
SIZ1	YDR409W	TY1B-OR	Q92393	1755 aa		4.25	□□□□□ -1.73
SIZ1	YDR409W	GCN2	P15442	1659 aa		4.25	□□□□□ -1.73
SIZ1	YDR409W	REB1	P21538	810 aa		4.24	□□□□□ -1.73
SIZ1	YDR409W	ALD2	P47771	506 aa		4.24	□□□□□ -1.73
SIZ1	YDR409W	YRB30	P53107	440 aa	Predicted RBP	4.24	□□□□□ -1.73
SIZ1	YDR409W	KTR1	P27810	393 aa	Known RBP	4.24	□□□□□ -1.73
SIZ1	YDR409W	CAB3	P36076	571 aa		4.24	□□□□□ -1.73
SIZ1	YDR409W	IRC20	Q06554	1556 aa		4.24	□□□□□ -1.73
SIZ1	YDR409W	VTH1	P40438	1549 aa		4.24	□□□□□ -1.73
SIZ1	YDR409W	VTH2	P40890	1549 aa		4.24	□□□□□ -1.73
SIZ1	YDR409W	KRI1	P42846	591 aa	Known RBP	4.23	□□□□□ -1.73
SIZ1	YDR409W	MDG1	P53885	366 aa		4.23	□□□□□ -1.73
SIZ1	YDR409W	BRL1	P38770	471 aa		4.23	□□□□□ -1.73
SIZ1	YDR409W	BIM1	P40013	344 aa		4.23	□□□□□ -1.73
SIZ1	YDR409W	MHP1	P43638	1398 aa		4.22	□□□□□ -1.73
SIZ1	YDR409W	ISW1	P38144	1129 aa		4.22	□□□□□ -1.73
SIZ1	YDR409W	YML083C	Q04526	418 aa		4.22	□□□□□ -1.73
SIZ1	YDR409W	ATE1	P16639	503 aa		4.22	□□□□□ -1.73
SIZ1	YDR409W	ALD4	P46367	519 aa	Known RBP	4.22	□□□□□ -1.73
SIZ1	YDR409W	MAG2	Q06436	670 aa	Known RBP	4.22	□□□□□ -1.73
SIZ1	YDR409W	CAT8	P39113	1433 aa		4.21	□□□□□ -1.74
SIZ1	YDR409W	TY1B-JR2	P47100	1755 aa	Known RBP	4.21	□□□□□ -1.74
SIZ1	YDR409W	TY1B-ER2	Q03619	1755 aa		4.21	□□□□□ -1.74
SIZ1	YDR409W	TY1B-MR1	Q04214	1755 aa		4.21	□□□□□ -1.74
SIZ1	YDR409W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.21	□□□□□ -1.74
SIZ1	YDR409W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.21	□□□□□ -1.74
SIZ1	YDR409W	TY1B-NL1	Q12112	1755 aa		4.21	□□□□□ -1.74
SIZ1	YDR409W	TY1B-GR1	Q12141	1755 aa		4.21	□□□□□ -1.74
SIZ1	YDR409W	TY1B-BL	Q12490	1755 aa		4.21	□□□□□ -1.74
SIZ1	YDR409W	IES2	P40154	320 aa		4.21	□□□□□ -1.74
SIZ1	YDR409W	YJR008W	P47085	338 aa		4.21	□□□□□ -1.74
SIZ1	YDR409W	YFR016C	P43597	1233 aa	Known RBP	4.2	□□□□□ -1.74
SIZ1	YDR409W	CFT1	Q06632	1357 aa	Known RBP	4.2	□□□□□ -1.74
SIZ1	YDR409W	YGL015C	P33199	130 aa		4.2	□□□□□ -1.74
SIZ1	YDR409W	SVL3	Q03088	825 aa	Known RBP	4.2	□□□□□ -1.74
SIZ1	YDR409W	GIN4	Q12263	1142 aa		4.2	□□□□□ -1.74
SIZ1	YDR409W	AI2	P03876	854 aa		4.19	□□□□□ -1.74
SIZ1	YDR409W	TFC8	Q12308	588 aa		4.19	□□□□□ -1.74
SIZ1	YDR409W	BRN1	P38170	754 aa		4.19	□□□□□ -1.74
SIZ1	YDR409W	IPL1	P38991	367 aa		4.19	□□□□□ -1.74
SIZ1	YDR409W	CWC22	P53333	577 aa	Known RBP	4.19	□□□□□ -1.74
SIZ1	YDR409W	STB3	Q12427	513 aa		4.19	□□□□□ -1.74
SIZ1	YDR409W	LTE1	P07866	1435 aa		4.19	□□□□□ -1.74
SIZ1	YDR409W	IME2	P32581	645 aa		4.18	□□□□□ -1.74
SIZ1	YDR409W	UBX5	Q06682	500 aa		4.18	□□□□□ -1.74
SIZ1	YDR409W	DCD1	P06773	312 aa		4.18	□□□□□ -1.74
SIZ1	YDR409W	PUP1	P25043	261 aa		4.18	□□□□□ -1.74
SIZ1	YDR409W	TTI1	P36097	1038 aa		4.18	□□□□□ -1.74
SIZ1	YDR409W	YDR090C	Q03193	310 aa		4.18	□□□□□ -1.74
SIZ1	YDR409W	BUD21	Q08492	214 aa	Predicted RBP	4.18	□□□□□ -1.74
SIZ1	YDR409W	GEA2	P39993	1459 aa	Known RBP	4.18	□□□□□ -1.74
SIZ1	YDR409W	CDC25	P04821	1589 aa		4.18	□□□□□ -1.74
SIZ1	YDR409W	ARO1	P08566	1588 aa	Known RBP	4.17	□□□□□ -1.74
SIZ1	YDR409W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.17	□□□□□ -1.74
SIZ1	YDR409W	TIF1	P10081	395 aa	Known RBP	4.17	□□□□□ -1.74
SIZ1	YDR409W	MAK11	P20484	414 aa	Known RBP	4.17	□□□□□ -1.74
SIZ1	YDR409W	PDR1	P12383	1068 aa		4.17	□□□□□ -1.74
SIZ1	YDR409W	CPS1	P27614	576 aa		4.17	□□□□□ -1.74
SIZ1	YDR409W	BIO2	P32451	375 aa		4.17	□□□□□ -1.74
SIZ1	YDR409W	CST6	P40535	587 aa		4.17	□□□□□ -1.74
SIZ1	YDR409W	GDB1	Q06625	1536 aa		4.17	□□□□□ -1.74
SIZ1	YDR409W	WHI5	Q12416	295 aa		4.16	□□□□□ -1.74
SIZ1	YDR409W	PDR12	Q02785	1511 aa		4.16	□□□□□ -1.74
SIZ1	YDR409W	OPY1	P38271	328 aa		4.16	□□□□□ -1.74
SIZ1	YDR409W	PMC1	P38929	1173 aa	Predicted RBP	4.16	□□□□□ -1.74
SIZ1	YDR409W	YJL007C	P47080	104 aa		4.16	□□□□□ -1.74
SIZ1	YDR409W	TRL1	P09880	827 aa	Known RBP	4.15	□□□□□ -1.74
SIZ1	YDR409W	EDS1	P38073	919 aa		4.15	□□□□□ -1.74
SIZ1	YDR409W	MET10	P39692	1035 aa		4.15	□□□□□ -1.74
SIZ1	YDR409W	YIL055C	P40523	627 aa	Known RBP	4.15	□□□□□ -1.74
SIZ1	YDR409W	IOC3	P43596	787 aa		4.15	□□□□□ -1.75
SIZ1	YDR409W	CLC1	P17891	233 aa		4.15	□□□□□ -1.75
SIZ1	YDR409W	HEM3	P28789	327 aa		4.15	□□□□□ -1.75
SIZ1	YDR409W	TPS3	P38426	1054 aa	Known RBP	4.15	□□□□□ -1.75
SIZ1	YDR409W	TAT2	P38967	592 aa		4.15	□□□□□ -1.75
SIZ1	YDR409W	NOP7	P53261	605 aa	Known RBP	4.15	□□□□□ -1.75
SIZ1	YDR409W	RPO21	P04050	1733 aa	Known RBP	4.14	□□□□□ -1.75
SIZ1	YDR409W	RPA190	P10964	1664 aa	Known RBP	4.14	□□□□□ -1.75
SIZ1	YDR409W	UBP9	P39967	754 aa		4.14	□□□□□ -1.75
SIZ1	YDR409W	OSW7	P43611	510 aa		4.14	□□□□□ -1.75
SIZ1	YDR409W	COX6	P00427	148 aa		4.14	□□□□□ -1.75
SIZ1	YDR409W	KEX1	P09620	729 aa		4.14	□□□□□ -1.75
SIZ1	YDR409W	HO	P09932	586 aa		4.14	□□□□□ -1.75
SIZ1	YDR409W	VPS29	P38759	282 aa		4.14	□□□□□ -1.75
SIZ1	YDR409W	YAF9	P53930	226 aa		4.14	□□□□□ -1.75
SIZ1	YDR409W	NTE1	Q04958	1679 aa		4.13	□□□□□ -1.75
SIZ1	YDR409W	IQG1	Q12280	1495 aa		4.13	□□□□□ -1.75
SIZ1	YDR409W	HAP1	P0CE41	1502 aa		4.13	□□□□□ -1.75
SIZ1	YDR409W	RPC31	P17890	251 aa		4.13	□□□□□ -1.75
SIZ1	YDR409W	BUD6	P41697	788 aa		4.13	□□□□□ -1.75
SIZ1	YDR409W	ZDS1	P50111	915 aa	Known RBP	4.12	□□□□□ -1.75
SIZ1	YDR409W	VPS72	Q03388	795 aa		4.12	□□□□□ -1.75
SIZ1	YDR409W	YOR093C	Q12275	1648 aa		4.12	□□□□□ -1.75
SIZ1	YDR409W	COQ8	P27697	501 aa		4.12	□□□□□ -1.75
SIZ1	YDR409W	BCH2	P36122	765 aa		4.12	□□□□□ -1.75
SIZ1	YDR409W	NOP53	Q12080	455 aa	Known RBP	4.12	□□□□□ -1.75
SIZ1	YDR409W	MAK21	Q12176	1025 aa	Known RBP	4.12	□□□□□ -1.75
SIZ1	YDR409W	CIT2	P08679	460 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms