RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene CNL1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNL1YDR357C YPR148CQ06523 435 aa6.29□□□□□ -1.4
CNL1YDR357C RAD54P32863 898 aa6.28□□□□□ -1.4
CNL1YDR357C SWE1P32944 819 aa6.27□□□□□ -1.41
CNL1YDR357C GIN4Q12263 1142 aa6.27□□□□□ -1.41
CNL1YDR357C MRX12P47084 519 aa6.26□□□□□ -1.41
CNL1YDR357C YNR021WP53723 404 aaKnown RBP6.25□□□□□ -1.41
CNL1YDR357C DOS2P54858 310 aa6.25□□□□□ -1.41
CNL1YDR357C SAS4Q04003 481 aa6.25□□□□□ -1.41
CNL1YDR357C YTA7P40340 1379 aa6.24□□□□□ -1.41
CNL1YDR357C FAR11P53917 953 aa6.24□□□□□ -1.41
CNL1YDR357C KRI1P42846 591 aaKnown RBP6.23□□□□□ -1.41
CNL1YDR357C OSW7P43611 510 aa6.23□□□□□ -1.41
CNL1YDR357C SUB2Q07478 446 aaKnown RBP6.23□□□□□ -1.41
CNL1YDR357C YEL077CQ3E7X8 1277 aa6.23□□□□□ -1.41
CNL1YDR357C PAM1P37304 830 aaKnown RBP6.22□□□□□ -1.41
CNL1YDR357C ATG36P46983 293 aa6.22□□□□□ -1.41
CNL1YDR357C MDG1P53885 366 aa6.22□□□□□ -1.41
CNL1YDR357C SPC42P36094 363 aa6.21□□□□□ -1.42
CNL1YDR357C YFR016CP43597 1233 aaKnown RBP6.21□□□□□ -1.42
CNL1YDR357C MAM3Q12296 706 aa6.21□□□□□ -1.42
CNL1YDR357C GAP1P19145 602 aaPredicted RBP6.2□□□□□ -1.42
CNL1YDR357C GAR1P28007 205 aaKnown RBP6.19□□□□□ -1.42
CNL1YDR357C SIS2P36024 562 aa6.19□□□□□ -1.42
CNL1YDR357C DSF2P38213 736 aa6.19□□□□□ -1.42
CNL1YDR357C LAM6Q08001 693 aa6.19□□□□□ -1.42
CNL1YDR357C AIM7Q12156 149 aa6.19□□□□□ -1.42
CNL1YDR357C INO80P53115 1489 aa6.19□□□□□ -1.42
CNL1YDR357C NAB3P38996 802 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42 RIP-Chip
CNL1YDR357C REF2P42073 533 aaPredicted RBP6.18□□□□□ -1.42
CNL1YDR357C BRE2P43132 505 aa6.17□□□□□ -1.42
CNL1YDR357C YJR008WP47085 338 aa6.17□□□□□ -1.42
CNL1YDR357C STR2P47164 639 aa6.17□□□□□ -1.42
CNL1YDR357C BUD20Q08004 166 aaPredicted RBP6.17□□□□□ -1.42
CNL1YDR357C HEM3P28789 327 aa6.16□□□□□ -1.42
CNL1YDR357C RRN6P32786 894 aa6.16□□□□□ -1.42
CNL1YDR357C GUA1P38625 525 aaKnown RBP6.16□□□□□ -1.42
CNL1YDR357C YRR1Q12172 810 aa6.16□□□□□ -1.42
CNL1YDR357C GBP2P25555 427 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
CNL1YDR357C PBS2P08018 668 aa6.14□□□□□ -1.43
CNL1YDR357C GLC3P32775 704 aa6.14□□□□□ -1.43
CNL1YDR357C SSF1P38789 453 aaPredicted RBP6.14□□□□□ -1.43
CNL1YDR357C ORC6P38826 435 aa6.14□□□□□ -1.43
CNL1YDR357C ISM1P48526 1002 aa6.14□□□□□ -1.43
CNL1YDR357C TPO2P53283 614 aa6.14□□□□□ -1.43
CNL1YDR357C HPC2Q01448 625 aa6.14□□□□□ -1.43
CNL1YDR357C RPP1BP10622 106 aaKnown RBP6.13□□□□□ -1.43
CNL1YDR357C MRF1P30775 413 aaPredicted RBP6.13□□□□□ -1.43
CNL1YDR357C AIR1P40507 360 aaKnown RBP6.13□□□□□ -1.43
CNL1YDR357C RPS0BP46654 252 aaKnown RBP6.13□□□□□ -1.43
CNL1YDR357C YAF9P53930 226 aa6.13□□□□□ -1.43
CNL1YDR357C FPR4Q06205 392 aaPredicted RBP6.13□□□□□ -1.43
CNL1YDR357C KIC1P38692 1080 aa6.12□□□□□ -1.43
CNL1YDR357C OCA5P38738 679 aa6.12□□□□□ -1.43
CNL1YDR357C SSA4P22202 642 aaKnown RBP6.11□□□□□ -1.43
CNL1YDR357C GCR2Q01722 534 aa6.11□□□□□ -1.43
CNL1YDR357C CSC1Q06538 782 aa6.11□□□□□ -1.43
CNL1YDR357C BUD21Q08492 214 aaPredicted RBP6.11□□□□□ -1.43
CNL1YDR357C NUD1P32336 851 aa6.1□□□□□ -1.43
CNL1YDR357C NMD2P38798 1089 aaKnown RBP6.1□□□□□ -1.43
CNL1YDR357C TUM1Q08686 304 aaKnown RBP6.1□□□□□ -1.43
CNL1YDR357C TFB4Q12004 338 aa6.1□□□□□ -1.43
CNL1YDR357C TY1A-DR4O74302 440 aa6.09□□□□□ -1.43
CNL1YDR357C PRT1P06103 763 aaKnown RBP6.09□□□□□ -1.43
CNL1YDR357C TY1A-HP0C2I4 478 aaKnown RBP6.09□□□□□ -1.43
CNL1YDR357C TY1A-AP0CX57 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-PR1P0CX58 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-ORP0CX59 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-PR2P0CX60 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-DR5P0CX65 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-ER2P0CX66 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-GR3P0CX67 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-LR1P0CX68 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-MR2P0CX69 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-JR2P47099 440 aa6.09□□□□□ -1.43
CNL1YDR357C CLA4P48562 842 aa6.09□□□□□ -1.43
CNL1YDR357C PEX21P50091 288 aa6.09□□□□□ -1.43
CNL1YDR357C RPL34AP87262 121 aaPredicted RBP6.09□□□□□ -1.43
CNL1YDR357C TY1A-DR1Q03856 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-ML1Q04706 440 aaKnown RBP6.09□□□□□ -1.43
CNL1YDR357C TY1A-BRQ12217 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-NL2Q12470 440 aa6.09□□□□□ -1.43
CNL1YDR357C TY1A-GR2Q12485 440 aa6.09□□□□□ -1.43
CNL1YDR357C COX6P00427 148 aa6.08□□□□□ -1.44
CNL1YDR357C TFB3Q03290 321 aa6.08□□□□□ -1.44
CNL1YDR357C ITT1Q04638 464 aa6.08□□□□□ -1.44
CNL1YDR357C CDC3P32457 520 aaKnown RBP6.07□□□□□ -1.44
CNL1YDR357C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
CNL1YDR357C MAK21Q12176 1025 aaKnown RBP6.07□□□□□ -1.44
CNL1YDR357C SEC2P17065 759 aa6.06□□□□□ -1.44
CNL1YDR357C TOA1P32773 286 aa6.06□□□□□ -1.44
CNL1YDR357C NNF1P47149 201 aa6.06□□□□□ -1.44
CNL1YDR357C TOM20P35180 183 aa6.05□□□□□ -1.44
CNL1YDR357C CST6P40535 587 aa6.05□□□□□ -1.44
CNL1YDR357C ALD4P46367 519 aaKnown RBP6.05□□□□□ -1.44
CNL1YDR357C UBX5Q06682 500 aa6.05□□□□□ -1.44
CNL1YDR357C ERG12P07277 443 aa6.04□□□□□ -1.44
CNL1YDR357C MVP1P40959 511 aaKnown RBP6.04□□□□□ -1.44
CNL1YDR357C SEN54Q02825 467 aaPredicted RBP6.04□□□□□ -1.44
CNL1YDR357C RGR1P19263 1082 aa6.03□□□□□ -1.44
CNL1YDR357C ZDS1P50111 915 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms