RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W TY1A-PR2P0CX60 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-DR5P0CX65 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-ER2P0CX66 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-GR3P0CX67 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-LR1P0CX68 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-MR2P0CX69 440 aa5.95□□□□□ -1.46
SSF2YDR312W SEC2P17065 759 aa5.95□□□□□ -1.46
SSF2YDR312W SDH2P21801 266 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-JR2P47099 440 aa5.95□□□□□ -1.46
SSF2YDR312W TEA1P47988 759 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-DR1Q03856 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-ML1Q04706 440 aaKnown RBP5.95□□□□□ -1.46
SSF2YDR312W TY1A-BRQ12217 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-NL2Q12470 440 aa5.95□□□□□ -1.46
SSF2YDR312W TY1A-GR2Q12485 440 aa5.95□□□□□ -1.46
SSF2YDR312W MRF1P30775 413 aaPredicted RBP5.93□□□□□ -1.46
SSF2YDR312W RAS1P01119 309 aa5.93□□□□□ -1.46
SSF2YDR312W KEX2P13134 814 aa5.93□□□□□ -1.46
SSF2YDR312W YNR021WP53723 404 aaKnown RBP5.93□□□□□ -1.46
SSF2YDR312W AMS1P22855 1083 aa5.92□□□□□ -1.46
SSF2YDR312W ERF2Q06551 359 aa5.92□□□□□ -1.46
SSF2YDR312W SIT4P20604 311 aa5.91□□□□□ -1.46
SSF2YDR312W SPT16P32558 1035 aaKnown RBP5.9□□□□□ -1.47
SSF2YDR312W ATF2P53296 535 aa5.9□□□□□ -1.47
SSF2YDR312W NIS1P53939 407 aa5.9□□□□□ -1.47
SSF2YDR312W GLC3P32775 704 aa5.89□□□□□ -1.47
SSF2YDR312W RTF1P53064 558 aa5.89□□□□□ -1.47
SSF2YDR312W YEL077CQ3E7X8 1277 aa5.89□□□□□ -1.47
SSF2YDR312W ERG12P07277 443 aa5.88□□□□□ -1.47
SSF2YDR312W RRN7P40992 514 aa5.88□□□□□ -1.47
SSF2YDR312W YNL115CP53925 644 aa5.88□□□□□ -1.47
SSF2YDR312W TRK1P12685 1235 aa5.87□□□□□ -1.47
SSF2YDR312W PAT1P25644 796 aaKnown RBP5.87□□□□□ -1.47
SSF2YDR312W LEU3P08638 886 aa5.86□□□□□ -1.47
SSF2YDR312W FPK1P53739 893 aa5.86□□□□□ -1.47
SSF2YDR312W YMR196WQ04336 1088 aa5.85□□□□□ -1.47
SSF2YDR312W AGE1Q04412 482 aa5.84□□□□□ -1.47
SSF2YDR312W AIM7Q12156 149 aa5.84□□□□□ -1.47
SSF2YDR312W TUB4P53378 473 aa5.83□□□□□ -1.48
SSF2YDR312W CST6P40535 587 aa5.82□□□□□ -1.48
SSF2YDR312W HST2P53686 357 aa5.82□□□□□ -1.48
SSF2YDR312W SLY41P22215 453 aa5.81□□□□□ -1.48
SSF2YDR312W PAC1P39946 494 aaKnown RBP5.81□□□□□ -1.48
SSF2YDR312W LAM6Q08001 693 aa5.8□□□□□ -1.48
SSF2YDR312W SCJ1P25303 377 aa5.79□□□□□ -1.48
SSF2YDR312W BDP1P46678 594 aa5.79□□□□□ -1.48
SSF2YDR312W MMP1Q12372 583 aa5.79□□□□□ -1.48
SSF2YDR312W MOD5P07884 428 aa5.78□□□□□ -1.48
SSF2YDR312W GLN1P32288 370 aaKnown RBP5.78□□□□□ -1.48
SSF2YDR312W FRK1Q03002 865 aaPredicted RBP5.78□□□□□ -1.48
SSF2YDR312W RPN1P38764 993 aaKnown RBP5.76□□□□□ -1.49
SSF2YDR312W PUS6P53294 404 aa5.76□□□□□ -1.49
SSF2YDR312W KXD1P53158 218 aa5.75□□□□□ -1.49
SSF2YDR312W TYW1Q08960 810 aaKnown RBP5.75□□□□□ -1.49
SSF2YDR312W KIN1P13185 1064 aa5.74□□□□□ -1.49
SSF2YDR312W ESS1P22696 170 aa5.74□□□□□ -1.49
SSF2YDR312W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
SSF2YDR312W CLA4P48562 842 aa5.74□□□□□ -1.49
SSF2YDR312W YPL062WQ02781 134 aa5.74□□□□□ -1.49
SSF2YDR312W TRM1P15565 570 aaKnown RBP5.73□□□□□ -1.49
SSF2YDR312W KTR1P27810 393 aaKnown RBP5.73□□□□□ -1.49
SSF2YDR312W AIR1P40507 360 aaKnown RBP5.73□□□□□ -1.49
SSF2YDR312W CSN12P47130 423 aa5.73□□□□□ -1.49
SSF2YDR312W TBF1Q02457 562 aa5.73□□□□□ -1.49
SSF2YDR312W PDC1P06169 563 aaKnown RBP5.72□□□□□ -1.49
SSF2YDR312W TPD3P31383 635 aa5.72□□□□□ -1.49
SSF2YDR312W HXT10P43581 546 aa5.72□□□□□ -1.49
SSF2YDR312W HED1Q03937 162 aa5.72□□□□□ -1.49
SSF2YDR312W YJU3P28321 313 aa5.71□□□□□ -1.5
SSF2YDR312W RPA14P50106 137 aa5.71□□□□□ -1.5
SSF2YDR312W YDL206WQ12424 762 aa5.71□□□□□ -1.5
SSF2YDR312W RRD1P40454 393 aaKnown RBP5.7□□□□□ -1.5
SSF2YDR312W PUS5Q06244 254 aa5.7□□□□□ -1.5
SSF2YDR312W YPR097WQ06839 1073 aa5.7□□□□□ -1.5
SSF2YDR312W ALR1Q08269 859 aa5.7□□□□□ -1.5
SSF2YDR312W CDC4P07834 779 aa5.69□□□□□ -1.5
SSF2YDR312W PKH3Q03306 898 aaPredicted RBP5.69□□□□□ -1.5
SSF2YDR312W RSC30P38781 883 aa5.68□□□□□ -1.5
SSF2YDR312W SSA2P10592 639 aaKnown RBP5.66□□□□□ -1.5
SSF2YDR312W ARG8P18544 423 aa5.66□□□□□ -1.5
SSF2YDR312W LEO1P38439 464 aa5.65□□□□□ -1.51
SSF2YDR312W GCR2Q01722 534 aa5.65□□□□□ -1.51
SSF2YDR312W SYH1Q02875 849 aaKnown RBP5.65□□□□□ -1.51
SSF2YDR312W GUA1P38625 525 aaKnown RBP5.64□□□□□ -1.51
SSF2YDR312W MET32Q12041 191 aa5.64□□□□□ -1.51
SSF2YDR312W RAD59Q12223 238 aa5.64□□□□□ -1.51
SSF2YDR312W GBP2P25555 427 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
SSF2YDR312W BRE2P43132 505 aa5.63□□□□□ -1.51
SSF2YDR312W AFT1P22149 690 aa5.61□□□□□ -1.51
SSF2YDR312W KIP2P28743 706 aa5.61□□□□□ -1.51
SSF2YDR312W GAR1P28007 205 aaKnown RBP5.6□□□□□ -1.51
SSF2YDR312W ASH1P34233 588 aa5.6□□□□□ -1.51
SSF2YDR312W VAC17P25591 423 aa5.59□□□□□ -1.51
SSF2YDR312W IXR1P33417 597 aa5.59□□□□□ -1.51
SSF2YDR312W HST3P53687 447 aa5.59□□□□□ -1.51
SSF2YDR312W HPC2Q01448 625 aa5.58□□□□□ -1.52
SSF2YDR312W MRT4P33201 236 aaKnown RBP5.55□□□□□ -1.52
SSF2YDR312W FIG4P42837 879 aa5.55□□□□□ -1.52
SSF2YDR312W MAK16P10962 306 aaPredicted RBP5.55□□□□□ -1.52
SSF2YDR312W MSB3P48566 633 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms