RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A TY1A-ER2P0CX66 440 aa7.92□□□□□ -1.14
YDR261W-AYDR261W-A TY1A-GR3P0CX67 440 aa7.92□□□□□ -1.14
YDR261W-AYDR261W-A TY1A-LR1P0CX68 440 aa7.92□□□□□ -1.14
YDR261W-AYDR261W-A TY1A-MR2P0CX69 440 aa7.92□□□□□ -1.14
YDR261W-AYDR261W-A TY1A-JR2P47099 440 aa7.92□□□□□ -1.14
YDR261W-AYDR261W-A TY1A-DR1Q03856 440 aa7.92□□□□□ -1.14
YDR261W-AYDR261W-A TY1A-ML1Q04706 440 aaKnown RBP7.92□□□□□ -1.14
YDR261W-AYDR261W-A ERF2Q06551 359 aa7.92□□□□□ -1.14
YDR261W-AYDR261W-A TY1A-BRQ12217 440 aa7.92□□□□□ -1.14
YDR261W-AYDR261W-A TY1A-NL2Q12470 440 aa7.92□□□□□ -1.14
YDR261W-AYDR261W-A TY1A-GR2Q12485 440 aa7.92□□□□□ -1.14
YDR261W-AYDR261W-A PRT1P06103 763 aaKnown RBP7.91□□□□□ -1.14
YDR261W-AYDR261W-A GCD11P32481 527 aaKnown RBP7.91□□□□□ -1.14
YDR261W-AYDR261W-A ATF2P53296 535 aa7.9□□□□□ -1.14
YDR261W-AYDR261W-A NIS1P53939 407 aa7.9□□□□□ -1.14
YDR261W-AYDR261W-A KEX2P13134 814 aa7.89□□□□□ -1.15
YDR261W-AYDR261W-A SAS4Q04003 481 aa7.89□□□□□ -1.15
YDR261W-AYDR261W-A DPS1P04802 557 aaKnown RBP7.88□□□□□ -1.15
YDR261W-AYDR261W-A SIT4P20604 311 aa7.88□□□□□ -1.15
YDR261W-AYDR261W-A SDH2P21801 266 aa7.88□□□□□ -1.15
YDR261W-AYDR261W-A FPK1P53739 893 aa7.84□□□□□ -1.15
YDR261W-AYDR261W-A AIM7Q12156 149 aa7.84□□□□□ -1.15
YDR261W-AYDR261W-A RTF1P53064 558 aa7.81□□□□□ -1.16
YDR261W-AYDR261W-A YNL115CP53925 644 aa7.81□□□□□ -1.16
YDR261W-AYDR261W-A RAS1P01119 309 aa7.79□□□□□ -1.16
YDR261W-AYDR261W-A RPN1P38764 993 aaKnown RBP7.79□□□□□ -1.16
YDR261W-AYDR261W-A SCJ1P25303 377 aa7.78□□□□□ -1.16
YDR261W-AYDR261W-A RRN7P40992 514 aa7.78□□□□□ -1.16
YDR261W-AYDR261W-A YMR196WQ04336 1088 aa7.78□□□□□ -1.16
YDR261W-AYDR261W-A AGE1Q04412 482 aa7.78□□□□□ -1.16
YDR261W-AYDR261W-A MRF1P30775 413 aaPredicted RBP7.78□□□□□ -1.16
YDR261W-AYDR261W-A HST2P53686 357 aa7.78□□□□□ -1.16
YDR261W-AYDR261W-A SPT16P32558 1035 aaKnown RBP7.77□□□□□ -1.17
YDR261W-AYDR261W-A TUB4P53378 473 aa7.77□□□□□ -1.17
YDR261W-AYDR261W-A KIN1P13185 1064 aa7.76□□□□□ -1.17
YDR261W-AYDR261W-A AMS1P22855 1083 aa7.76□□□□□ -1.17
YDR261W-AYDR261W-A SLY41P22215 453 aa7.75□□□□□ -1.17
YDR261W-AYDR261W-A PAC1P39946 494 aaKnown RBP7.75□□□□□ -1.17
YDR261W-AYDR261W-A TYW1Q08960 810 aaKnown RBP7.75□□□□□ -1.17
YDR261W-AYDR261W-A KTR1P27810 393 aaKnown RBP7.74□□□□□ -1.17
YDR261W-AYDR261W-A MMP1Q12372 583 aa7.74□□□□□ -1.17
YDR261W-AYDR261W-A ERG12P07277 443 aa7.73□□□□□ -1.17
YDR261W-AYDR261W-A SRC1Q03707 834 aa7.73□□□□□ -1.17
YDR261W-AYDR261W-A PAT1P25644 796 aaKnown RBP7.72□□□□□ -1.17
YDR261W-AYDR261W-A GLN1P32288 370 aaKnown RBP7.72□□□□□ -1.17
YDR261W-AYDR261W-A CST6P40535 587 aa7.72□□□□□ -1.17
YDR261W-AYDR261W-A YEL077CQ3E7X8 1277 aa7.72□□□□□ -1.17
YDR261W-AYDR261W-A ESS1P22696 170 aa7.71□□□□□ -1.18
YDR261W-AYDR261W-A CSN12P47130 423 aa7.7□□□□□ -1.18
YDR261W-AYDR261W-A YJU3P28321 313 aa7.68□□□□□ -1.18
YDR261W-AYDR261W-A MOD5P07884 428 aa7.67□□□□□ -1.18
YDR261W-AYDR261W-A PUS6P53294 404 aa7.67□□□□□ -1.18
YDR261W-AYDR261W-A LAM6Q08001 693 aa7.67□□□□□ -1.18
YDR261W-AYDR261W-A TRM1P15565 570 aaKnown RBP7.65□□□□□ -1.18
YDR261W-AYDR261W-A BDP1P46678 594 aa7.65□□□□□ -1.18
YDR261W-AYDR261W-A GUA1P38625 525 aaKnown RBP7.64□□□□□ -1.19
YDR261W-AYDR261W-A FRK1Q03002 865 aaPredicted RBP7.64□□□□□ -1.19
YDR261W-AYDR261W-A RSC30P38781 883 aa7.63□□□□□ -1.19
YDR261W-AYDR261W-A BUB1P41695 1021 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
YDR261W-AYDR261W-A PKH3Q03306 898 aaPredicted RBP7.62□□□□□ -1.19
YDR261W-AYDR261W-A PDC1P06169 563 aaKnown RBP7.61□□□□□ -1.19
YDR261W-AYDR261W-A CLA4P48562 842 aa7.61□□□□□ -1.19
YDR261W-AYDR261W-A KXD1P53158 218 aa7.61□□□□□ -1.19
YDR261W-AYDR261W-A YDL206WQ12424 762 aa7.61□□□□□ -1.19
YDR261W-AYDR261W-A TBF1Q02457 562 aa7.6□□□□□ -1.19
YDR261W-AYDR261W-A RGA2Q06407 1009 aa7.6□□□□□ -1.19
YDR261W-AYDR261W-A HXT10P43581 546 aa7.59□□□□□ -1.19
YDR261W-AYDR261W-A RPA14P50106 137 aa7.59□□□□□ -1.19
YDR261W-AYDR261W-A TPD3P31383 635 aa7.58□□□□□ -1.2
YDR261W-AYDR261W-A YPR097WQ06839 1073 aa7.58□□□□□ -1.2
YDR261W-AYDR261W-A AIR1P40507 360 aaKnown RBP7.57□□□□□ -1.2
YDR261W-AYDR261W-A PUS5Q06244 254 aa7.57□□□□□ -1.2
YDR261W-AYDR261W-A SSA2P10592 639 aaKnown RBP7.56□□□□□ -1.2
YDR261W-AYDR261W-A ARG8P18544 423 aa7.56□□□□□ -1.2
YDR261W-AYDR261W-A LEO1P38439 464 aa7.56□□□□□ -1.2
YDR261W-AYDR261W-A ALR1Q08269 859 aa7.56□□□□□ -1.2
YDR261W-AYDR261W-A RAD59Q12223 238 aa7.56□□□□□ -1.2
YDR261W-AYDR261W-A RRD1P40454 393 aaKnown RBP7.55□□□□□ -1.2
YDR261W-AYDR261W-A HED1Q03937 162 aa7.53□□□□□ -1.2
YDR261W-AYDR261W-A TRK1P12685 1235 aa7.52□□□□□ -1.2
YDR261W-AYDR261W-A RGA1P39083 1007 aa7.52□□□□□ -1.2
YDR261W-AYDR261W-A HPC2Q01448 625 aa7.52□□□□□ -1.21
YDR261W-AYDR261W-A CDC4P07834 779 aa7.49□□□□□ -1.21
YDR261W-AYDR261W-A TFB3Q03290 321 aa7.48□□□□□ -1.21
YDR261W-AYDR261W-A MET32Q12041 191 aa7.47□□□□□ -1.21
YDR261W-AYDR261W-A PKC1P24583 1151 aa7.46□□□□□ -1.22
YDR261W-AYDR261W-A SYH1Q02875 849 aaKnown RBP7.45□□□□□ -1.22
YDR261W-AYDR261W-A VAC17P25591 423 aa7.44□□□□□ -1.22
YDR261W-AYDR261W-A MAK16P10962 306 aaPredicted RBP7.43□□□□□ -1.22
YDR261W-AYDR261W-A KIP2P28743 706 aa7.43□□□□□ -1.22
YDR261W-AYDR261W-A IXR1P33417 597 aa7.42□□□□□ -1.22
YDR261W-AYDR261W-A BRL1P38770 471 aa7.42□□□□□ -1.22
YDR261W-AYDR261W-A FIG4P42837 879 aa7.42□□□□□ -1.22
YDR261W-AYDR261W-A ITT1Q04638 464 aa7.41□□□□□ -1.22
YDR261W-AYDR261W-A ASH1P34233 588 aa7.4□□□□□ -1.22
YDR261W-AYDR261W-A CSE4P36012 229 aa7.39□□□□□ -1.23
YDR261W-AYDR261W-A AFT1P22149 690 aa7.38□□□□□ -1.23
YDR261W-AYDR261W-A YBL036CP38197 257 aa7.38□□□□□ -1.23
YDR261W-AYDR261W-A YPR084WQ06821 456 aa7.37□□□□□ -1.23
YDR261W-AYDR261W-A MRT4P33201 236 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms