RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W ISM1P48526 1002 aa7.4□□□□□ -1.22
HSP42YDR171W HST2P53686 357 aa7.4□□□□□ -1.22
HSP42YDR171W ERF2Q06551 359 aa7.4□□□□□ -1.22
HSP42YDR171W YPR015CQ12531 247 aa7.4□□□□□ -1.22
HSP42YDR171W SSA2P10592 639 aaKnown RBP7.39□□□□□ -1.23
HSP42YDR171W ESS1P22696 170 aa7.39□□□□□ -1.23
HSP42YDR171W GLN1P32288 370 aaKnown RBP7.39□□□□□ -1.23
HSP42YDR171W MMP1Q12372 583 aa7.39□□□□□ -1.23
HSP42YDR171W HPC2Q01448 625 aa7.38□□□□□ -1.23
HSP42YDR171W TFB3Q03290 321 aa7.38□□□□□ -1.23
HSP42YDR171W SLY41P22215 453 aa7.36□□□□□ -1.23
HSP42YDR171W YNL115CP53925 644 aa7.36□□□□□ -1.23
HSP42YDR171W PKH3Q03306 898 aaPredicted RBP7.36□□□□□ -1.23
HSP42YDR171W GCD11P32481 527 aaKnown RBP7.35□□□□□ -1.23
HSP42YDR171W YML082WQ04533 649 aaKnown RBP7.35□□□□□ -1.23
HSP42YDR171W BUD20Q08004 166 aaPredicted RBP7.35□□□□□ -1.23
HSP42YDR171W YJU3P28321 313 aa7.34□□□□□ -1.23
HSP42YDR171W BRL1P38770 471 aa7.34□□□□□ -1.23
HSP42YDR171W TY1A-DR4O74302 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-HP0C2I4 478 aaKnown RBP7.33□□□□□ -1.24
HSP42YDR171W TY1A-AP0CX57 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-PR1P0CX58 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-ORP0CX59 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-PR2P0CX60 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-DR5P0CX65 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-ER2P0CX66 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-GR3P0CX67 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-LR1P0CX68 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-MR2P0CX69 440 aa7.33□□□□□ -1.24
HSP42YDR171W PKC1P24583 1151 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-JR2P47099 440 aa7.33□□□□□ -1.24
HSP42YDR171W RTF1P53064 558 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-DR1Q03856 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-ML1Q04706 440 aaKnown RBP7.33□□□□□ -1.24
HSP42YDR171W TAF7Q05021 590 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-BRQ12217 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-NL2Q12470 440 aa7.33□□□□□ -1.24
HSP42YDR171W TY1A-GR2Q12485 440 aa7.33□□□□□ -1.24
HSP42YDR171W SEC2P17065 759 aa7.31□□□□□ -1.24
HSP42YDR171W HGH1P48362 394 aaKnown RBP7.31□□□□□ -1.24
HSP42YDR171W RAD59Q12223 238 aa7.3□□□□□ -1.24
HSP42YDR171W PRT1P06103 763 aaKnown RBP7.29□□□□□ -1.24
HSP42YDR171W ARG8P18544 423 aa7.29□□□□□ -1.24
HSP42YDR171W VRP1P37370 817 aa7.28□□□□□ -1.24
HSP42YDR171W TRM1P15565 570 aaKnown RBP7.27□□□□□ -1.25
HSP42YDR171W RRN7P40992 514 aa7.26□□□□□ -1.25
HSP42YDR171W TUB4P53378 473 aa7.26□□□□□ -1.25
HSP42YDR171W AGE1Q04412 482 aa7.26□□□□□ -1.25
HSP42YDR171W GYP1Q08484 637 aa7.26□□□□□ -1.25
HSP42YDR171W PUS6P53294 404 aa7.24□□□□□ -1.25
HSP42YDR171W TBF1Q02457 562 aa7.24□□□□□ -1.25
HSP42YDR171W YBL036CP38197 257 aa7.23□□□□□ -1.25
HSP42YDR171W RSC30P38781 883 aa7.23□□□□□ -1.25
HSP42YDR171W PAC1P39946 494 aaKnown RBP7.23□□□□□ -1.25
HSP42YDR171W LAM6Q08001 693 aa7.23□□□□□ -1.25
HSP42YDR171W BCK2P33306 851 aa7.22□□□□□ -1.25
HSP42YDR171W SPT16P32558 1035 aaKnown RBP7.21□□□□□ -1.26
HSP42YDR171W YJL007CP47080 104 aa7.21□□□□□ -1.26
HSP42YDR171W YDL206WQ12424 762 aa7.21□□□□□ -1.26
HSP42YDR171W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
HSP42YDR171W PAT1P25644 796 aaKnown RBP7.19□□□□□ -1.26
HSP42YDR171W BIO2P32451 375 aa7.18□□□□□ -1.26
HSP42YDR171W BIM1P40013 344 aa7.18□□□□□ -1.26
HSP42YDR171W SAS4Q04003 481 aa7.18□□□□□ -1.26
HSP42YDR171W ATG32P40458 529 aa7.16□□□□□ -1.26
HSP42YDR171W PDC1P06169 563 aaKnown RBP7.14□□□□□ -1.27
HSP42YDR171W MAK16P10962 306 aaPredicted RBP7.14□□□□□ -1.27
HSP42YDR171W CSE4P36012 229 aa7.14□□□□□ -1.27
HSP42YDR171W RPA14P50106 137 aa7.14□□□□□ -1.27
HSP42YDR171W SDH2P21801 266 aa7.13□□□□□ -1.27
HSP42YDR171W KXD1P53158 218 aa7.13□□□□□ -1.27
HSP42YDR171W YNL108CP53929 270 aa7.13□□□□□ -1.27
HSP42YDR171W ALR1Q08269 859 aa7.13□□□□□ -1.27
HSP42YDR171W RLF2Q12495 606 aa7.12□□□□□ -1.27
HSP42YDR171W YDJ1P25491 409 aaKnown RBP7.11□□□□□ -1.27
HSP42YDR171W RPL34BP40525 121 aaKnown RBP7.11□□□□□ -1.27
HSP42YDR171W YPR097WQ06839 1073 aa7.11□□□□□ -1.27
HSP42YDR171W ERG12P07277 443 aa7.1□□□□□ -1.27
HSP42YDR171W TIF1P10081 395 aaKnown RBP7.1□□□□□ -1.27
HSP42YDR171W MRF1P30775 413 aaPredicted RBP7.1□□□□□ -1.27
HSP42YDR171W XDJ1P39102 459 aa7.1□□□□□ -1.27
HSP42YDR171W HXT10P43581 546 aa7.09□□□□□ -1.27
HSP42YDR171W MOD5P07884 428 aa7.08□□□□□ -1.28
HSP42YDR171W RRD1P40454 393 aaKnown RBP7.07□□□□□ -1.28
HSP42YDR171W FRK1Q03002 865 aaPredicted RBP7.07□□□□□ -1.28
HSP42YDR171W ENO2P00925 437 aaKnown RBP7.06□□□□□ -1.28
HSP42YDR171W SPT5P27692 1063 aaKnown RBP7.06□□□□□ -1.28
HSP42YDR171W CST6P40535 587 aa7.06□□□□□ -1.28
HSP42YDR171W BDP1P46678 594 aa7.06□□□□□ -1.28
HSP42YDR171W SUP45P12385 437 aaKnown RBP7.05□□□□□ -1.28
HSP42YDR171W RTG2P32608 588 aaKnown RBP7.05□□□□□ -1.28
HSP42YDR171W PUS5Q06244 254 aa7.05□□□□□ -1.28
HSP42YDR171W YPR204WQ08995 1032 aa7.05□□□□□ -1.28
HSP42YDR171W FIG4P42837 879 aa7.04□□□□□ -1.28
HSP42YDR171W NAF1P53919 492 aaKnown RBP7.04□□□□□ -1.28
HSP42YDR171W YEL077CQ3E7X8 1277 aa7.04□□□□□ -1.28
HSP42YDR171W TPD3P31383 635 aa7.03□□□□□ -1.28
HSP42YDR171W ISF1P32488 338 aa7.03□□□□□ -1.28
HSP42YDR171W MCM16Q12262 181 aa7.03□□□□□ -1.28
HSP42YDR171W TEC1P18412 486 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 82.9 ms