RNA–Protein interactions for RNA: YDR059C

UBC5, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC5, Length 447 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC5YDR059C TY1A-GR3P0CX67 440 aa9.33□□□□□ -0.92
UBC5YDR059C TY1A-LR1P0CX68 440 aa9.33□□□□□ -0.92
UBC5YDR059C TY1A-MR2P0CX69 440 aa9.33□□□□□ -0.92
UBC5YDR059C TY1A-JR2P47099 440 aa9.33□□□□□ -0.92
UBC5YDR059C TY1A-DR1Q03856 440 aa9.33□□□□□ -0.92
UBC5YDR059C TY1A-ML1Q04706 440 aaKnown RBP9.33□□□□□ -0.92
UBC5YDR059C TY1A-BRQ12217 440 aa9.33□□□□□ -0.92
UBC5YDR059C TY1A-NL2Q12470 440 aa9.33□□□□□ -0.92
UBC5YDR059C TY1A-GR2Q12485 440 aa9.33□□□□□ -0.92
UBC5YDR059C CLB5P30283 435 aa9.32□□□□□ -0.92
UBC5YDR059C GCD11P32481 527 aaKnown RBP9.32□□□□□ -0.92
UBC5YDR059C SEC2P17065 759 aa9.31□□□□□ -0.92
UBC5YDR059C SPB4P25808 606 aaPredicted RBP9.31□□□□□ -0.92
UBC5YDR059C NUP42P49686 430 aaKnown RBP9.3□□□□□ -0.92
UBC5YDR059C ERG12P07277 443 aa9.27□□□□□ -0.93
UBC5YDR059C SPT16P32558 1035 aaKnown RBP9.25□□□□□ -0.93
UBC5YDR059C KEX2P13134 814 aa9.22□□□□□ -0.93
UBC5YDR059C RQC2Q12532 1038 aaKnown RBP9.22□□□□□ -0.93
UBC5YDR059C TRK1P12685 1235 aa9.21□□□□□ -0.94
UBC5YDR059C PAT1P25644 796 aaKnown RBP9.21□□□□□ -0.94
UBC5YDR059C RRN7P40992 514 aa9.21□□□□□ -0.94
UBC5YDR059C DIT2P21595 489 aa9.2□□□□□ -0.94
UBC5YDR059C TEA1P47988 759 aa9.2□□□□□ -0.94
UBC5YDR059C ERF2Q06551 359 aa9.2□□□□□ -0.94
UBC5YDR059C CST6P40535 587 aa9.19□□□□□ -0.94
UBC5YDR059C RTF1P53064 558 aa9.18□□□□□ -0.94
UBC5YDR059C SIT4P20604 311 aa9.16□□□□□ -0.94
UBC5YDR059C LAM6Q08001 693 aa9.16□□□□□ -0.94
UBC5YDR059C YNL115CP53925 644 aa9.13□□□□□ -0.95
UBC5YDR059C NIS1P53939 407 aa9.12□□□□□ -0.95
UBC5YDR059C AGE1Q04412 482 aa9.12□□□□□ -0.95
UBC5YDR059C PAC1P39946 494 aaKnown RBP9.11□□□□□ -0.95
UBC5YDR059C BDP1P46678 594 aa9.1□□□□□ -0.95
UBC5YDR059C FRK1Q03002 865 aaPredicted RBP9.1□□□□□ -0.95
UBC5YDR059C TUB4P53378 473 aa9.09□□□□□ -0.95
UBC5YDR059C MOD5P07884 428 aa9.06□□□□□ -0.96
UBC5YDR059C AIR1P40507 360 aaKnown RBP9.06□□□□□ -0.96
UBC5YDR059C CLA4P48562 842 aa9.06□□□□□ -0.96
UBC5YDR059C FPK1P53739 893 aa9.05□□□□□ -0.96
UBC5YDR059C YNR021WP53723 404 aaKnown RBP9.04□□□□□ -0.96
UBC5YDR059C YMR196WQ04336 1088 aa9.03□□□□□ -0.96
UBC5YDR059C HED1Q03937 162 aa9.02□□□□□ -0.97
UBC5YDR059C CDC4P07834 779 aa9.01□□□□□ -0.97
UBC5YDR059C ATF2P53296 535 aa9.01□□□□□ -0.97
UBC5YDR059C SLY41P22215 453 aa8.98□□□□□ -0.97
UBC5YDR059C BRE2P43132 505 aa8.98□□□□□ -0.97
UBC5YDR059C HST2P53686 357 aa8.97□□□□□ -0.97
UBC5YDR059C TPD3P31383 635 aa8.96□□□□□ -0.98
UBC5YDR059C GLC3P32775 704 aa8.96□□□□□ -0.98
UBC5YDR059C KXD1P53158 218 aa8.96□□□□□ -0.98
UBC5YDR059C GCR2Q01722 534 aa8.94□□□□□ -0.98
UBC5YDR059C HXT10P43581 546 aa8.92□□□□□ -0.98
UBC5YDR059C PUS6P53294 404 aa8.92□□□□□ -0.98
UBC5YDR059C AIM7Q12156 149 aa8.92□□□□□ -0.98
UBC5YDR059C PDC1P06169 563 aaKnown RBP8.91□□□□□ -0.98
UBC5YDR059C SCJ1P25303 377 aa8.91□□□□□ -0.98
UBC5YDR059C RRD1P40454 393 aaKnown RBP8.91□□□□□ -0.98
UBC5YDR059C TBF1Q02457 562 aa8.91□□□□□ -0.98
UBC5YDR059C PUS5Q06244 254 aa8.91□□□□□ -0.98
UBC5YDR059C MMP1Q12372 583 aa8.91□□□□□ -0.98
UBC5YDR059C GLN1P32288 370 aaKnown RBP8.9□□□□□ -0.98
UBC5YDR059C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
UBC5YDR059C RPA14P50106 137 aa8.89□□□□□ -0.99
UBC5YDR059C MET32Q12041 191 aa8.88□□□□□ -0.99
UBC5YDR059C TRM1P15565 570 aaKnown RBP8.87□□□□□ -0.99
UBC5YDR059C YPR097WQ06839 1073 aa8.87□□□□□ -0.99
UBC5YDR059C ALR1Q08269 859 aa8.87□□□□□ -0.99
UBC5YDR059C YDL206WQ12424 762 aa8.87□□□□□ -0.99
UBC5YDR059C AFT1P22149 690 aa8.84□□□□□ -0.99
UBC5YDR059C ASH1P34233 588 aa8.84□□□□□ -0.99
UBC5YDR059C ESS1P22696 170 aa8.83□□□□□ -1
UBC5YDR059C SYH1Q02875 849 aaKnown RBP8.83□□□□□ -1
UBC5YDR059C HST3P53687 447 aa8.82□□□□□ -1
UBC5YDR059C LEU3P08638 886 aa8.8□□□□□ -1
UBC5YDR059C RGA1P39083 1007 aa8.8□□□□□ -1
UBC5YDR059C TYW1Q08960 810 aaKnown RBP8.8□□□□□ -1
UBC5YDR059C YJU3P28321 313 aa8.79□□□□□ -1
UBC5YDR059C KTR1P27810 393 aaKnown RBP8.78□□□□□ -1
UBC5YDR059C RSC30P38781 883 aa8.76□□□□□ -1.01
UBC5YDR059C CSN12P47130 423 aa8.76□□□□□ -1.01
UBC5YDR059C KIP2P28743 706 aa8.75□□□□□ -1.01
UBC5YDR059C MET22P32179 357 aa8.75□□□□□ -1.01
UBC5YDR059C MSB3P48566 633 aaPredicted RBP8.74□□□□□ -1.01
UBC5YDR059C PKH3Q03306 898 aaPredicted RBP8.74□□□□□ -1.01
UBC5YDR059C ENV9Q08651 330 aa8.74□□□□□ -1.01
UBC5YDR059C IXR1P33417 597 aa8.73□□□□□ -1.01
UBC5YDR059C GAR1P28007 205 aaKnown RBP8.72□□□□□ -1.01
UBC5YDR059C MRT4P33201 236 aaKnown RBP8.7□□□□□ -1.02
UBC5YDR059C YJR115WP47152 169 aa8.7□□□□□ -1.02
UBC5YDR059C YPL062WQ02781 134 aa8.7□□□□□ -1.02
UBC5YDR059C ARG8P18544 423 aa8.69□□□□□ -1.02
UBC5YDR059C YDR444WQ04093 687 aa8.69□□□□□ -1.02
UBC5YDR059C KIN1P13185 1064 aa8.68□□□□□ -1.02
UBC5YDR059C VAC17P25591 423 aa8.68□□□□□ -1.02
UBC5YDR059C GBP2P25555 427 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
UBC5YDR059C UGA3P26370 528 aa8.66□□□□□ -1.02
UBC5YDR059C RTT106P40161 455 aa8.66□□□□□ -1.02
UBC5YDR059C LCB5Q06147 687 aaKnown RBP8.66□□□□□ -1.02
UBC5YDR059C SSA2P10592 639 aaKnown RBP8.65□□□□□ -1.02
UBC5YDR059C RPN1P38764 993 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms