RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W DPS1P04802 557 aaKnown RBP5.58□□□□□ -1.52
SHS1YDL225W SSA2P10592 639 aaKnown RBP5.58□□□□□ -1.52
SHS1YDL225W NUD1P32336 851 aa5.58□□□□□ -1.52
SHS1YDL225W GCD11P32481 527 aaKnown RBP5.58□□□□□ -1.52
SHS1YDL225W HGH1P48362 394 aaKnown RBP5.58□□□□□ -1.52
SHS1YDL225W TYW1Q08960 810 aaKnown RBP5.58□□□□□ -1.52
SHS1YDL225W KTR1P27810 393 aaKnown RBP5.57□□□□□ -1.52
SHS1YDL225W SAS4Q04003 481 aa5.57□□□□□ -1.52
SHS1YDL225W YMR196WQ04336 1088 aa5.57□□□□□ -1.52
SHS1YDL225W PAT1P25644 796 aaKnown RBP5.56□□□□□ -1.52
SHS1YDL225W TFB3Q03290 321 aa5.56□□□□□ -1.52
SHS1YDL225W PRT1P06103 763 aaKnown RBP5.55□□□□□ -1.52
SHS1YDL225W SIT4P20604 311 aa5.55□□□□□ -1.52
SHS1YDL225W SCJ1P25303 377 aa5.55□□□□□ -1.52
SHS1YDL225W MRF1P30775 413 aaPredicted RBP5.55□□□□□ -1.52
SHS1YDL225W GLN1P32288 370 aaKnown RBP5.55□□□□□ -1.52
SHS1YDL225W HST2P53686 357 aa5.55□□□□□ -1.52
SHS1YDL225W MMP1Q12372 583 aa5.54□□□□□ -1.52
SHS1YDL225W RAM1P22007 431 aa5.53□□□□□ -1.52
SHS1YDL225W BRL1P38770 471 aa5.53□□□□□ -1.52
SHS1YDL225W SPT16P32558 1035 aaKnown RBP5.53□□□□□ -1.52
SHS1YDL225W BUD20Q08004 166 aaPredicted RBP5.53□□□□□ -1.52
SHS1YDL225W ESS1P22696 170 aa5.52□□□□□ -1.53
SHS1YDL225W PKC1P24583 1151 aa5.52□□□□□ -1.53
SHS1YDL225W ISM1P48526 1002 aa5.52□□□□□ -1.53
SHS1YDL225W YPR015CQ12531 247 aa5.51□□□□□ -1.53
SHS1YDL225W YNL115CP53925 644 aa5.5□□□□□ -1.53
SHS1YDL225W ERG12P07277 443 aa5.5□□□□□ -1.53
SHS1YDL225W SLY41P22215 453 aa5.5□□□□□ -1.53
SHS1YDL225W STR2P47164 639 aa5.5□□□□□ -1.53
SHS1YDL225W PKH3Q03306 898 aaPredicted RBP5.5□□□□□ -1.53
SHS1YDL225W KEX2P13134 814 aa5.49□□□□□ -1.53
SHS1YDL225W YJU3P28321 313 aa5.49□□□□□ -1.53
SHS1YDL225W RTF1P53064 558 aa5.49□□□□□ -1.53
SHS1YDL225W ERF2Q06551 359 aa5.49□□□□□ -1.53
SHS1YDL225W RAD59Q12223 238 aa5.47□□□□□ -1.53
SHS1YDL225W RLF2Q12495 606 aa5.47□□□□□ -1.53
SHS1YDL225W ARG8P18544 423 aa5.47□□□□□ -1.53
SHS1YDL225W YEL077CQ3E7X8 1277 aa5.47□□□□□ -1.53
SHS1YDL225W RRN7P40992 514 aa5.45□□□□□ -1.54
SHS1YDL225W YJL007CP47080 104 aa5.45□□□□□ -1.54
SHS1YDL225W SEC2P17065 759 aa5.44□□□□□ -1.54
SHS1YDL225W RSC30P38781 883 aa5.44□□□□□ -1.54
SHS1YDL225W YBL036CP38197 257 aa5.43□□□□□ -1.54
SHS1YDL225W SRC1Q03707 834 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-DR4O74302 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-HP0C2I4 478 aaKnown RBP5.43□□□□□ -1.54
SHS1YDL225W TY1A-AP0CX57 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-PR1P0CX58 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-ORP0CX59 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-PR2P0CX60 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-DR5P0CX65 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-ER2P0CX66 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-GR3P0CX67 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-LR1P0CX68 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-MR2P0CX69 440 aa5.43□□□□□ -1.54
SHS1YDL225W BIM1P40013 344 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-JR2P47099 440 aa5.43□□□□□ -1.54
SHS1YDL225W PUS6P53294 404 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-DR1Q03856 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-ML1Q04706 440 aaKnown RBP5.43□□□□□ -1.54
SHS1YDL225W TY1A-BRQ12217 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-NL2Q12470 440 aa5.43□□□□□ -1.54
SHS1YDL225W TY1A-GR2Q12485 440 aa5.43□□□□□ -1.54
SHS1YDL225W TRM1P15565 570 aaKnown RBP5.42□□□□□ -1.54
SHS1YDL225W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SHS1YDL225W TBF1Q02457 562 aa5.42□□□□□ -1.54
SHS1YDL225W LAM6Q08001 693 aa5.42□□□□□ -1.54
SHS1YDL225W CSE4P36012 229 aa5.41□□□□□ -1.54
SHS1YDL225W TUB4P53378 473 aa5.41□□□□□ -1.54
SHS1YDL225W ATG32P40458 529 aa5.4□□□□□ -1.54
SHS1YDL225W AMS1P22855 1083 aa5.4□□□□□ -1.55
SHS1YDL225W KXD1P53158 218 aa5.4□□□□□ -1.55
SHS1YDL225W AGE1Q04412 482 aa5.4□□□□□ -1.55
SHS1YDL225W BIO2P32451 375 aa5.37□□□□□ -1.55
SHS1YDL225W TIF1P10081 395 aaKnown RBP5.37□□□□□ -1.55
SHS1YDL225W YNL108CP53929 270 aa5.37□□□□□ -1.55
SHS1YDL225W YDL206WQ12424 762 aa5.37□□□□□ -1.55
SHS1YDL225W MAK16P10962 306 aaPredicted RBP5.36□□□□□ -1.55
SHS1YDL225W PAC1P39946 494 aaKnown RBP5.36□□□□□ -1.55
SHS1YDL225W RPL34BP40525 121 aaKnown RBP5.36□□□□□ -1.55
SHS1YDL225W FRK1Q03002 865 aaPredicted RBP5.36□□□□□ -1.55
SHS1YDL225W RAS1P01119 309 aa5.35□□□□□ -1.55
SHS1YDL225W YDJ1P25491 409 aaKnown RBP5.35□□□□□ -1.55
SHS1YDL225W ALR1Q08269 859 aa5.35□□□□□ -1.55
SHS1YDL225W RPA14P50106 137 aa5.34□□□□□ -1.55
SHS1YDL225W SUP45P12385 437 aaKnown RBP5.34□□□□□ -1.56
SHS1YDL225W RTG2P32608 588 aaKnown RBP5.34□□□□□ -1.56
SHS1YDL225W YPR097WQ06839 1073 aa5.34□□□□□ -1.56
SHS1YDL225W SPT5P27692 1063 aaKnown RBP5.32□□□□□ -1.56
SHS1YDL225W BDP1P46678 594 aa5.32□□□□□ -1.56
SHS1YDL225W HXT10P43581 546 aa5.31□□□□□ -1.56
SHS1YDL225W PDC1P06169 563 aaKnown RBP5.31□□□□□ -1.56
SHS1YDL225W SDH2P21801 266 aa5.31□□□□□ -1.56
SHS1YDL225W NAF1P53919 492 aaKnown RBP5.31□□□□□ -1.56
SHS1YDL225W YPR204WQ08995 1032 aa5.31□□□□□ -1.56
SHS1YDL225W ENO2P00925 437 aaKnown RBP5.3□□□□□ -1.56
SHS1YDL225W KIP2P28743 706 aa5.3□□□□□ -1.56
SHS1YDL225W CST6P40535 587 aa5.29□□□□□ -1.56
SHS1YDL225W MOD5P07884 428 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms