RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	VRP1	P37370	817 aa		8.89	□□□□□ -0.99
RPN5	YDL147W	RAD59	Q12223	238 aa		8.88	□□□□□ -0.99
RPN5	YDL147W	ESS1	P22696	170 aa		8.87	□□□□□ -0.99
RPN5	YDL147W	GEF1	P37020	779 aa		8.87	□□□□□ -0.99
RPN5	YDL147W	XDJ1	P39102	459 aa		8.87	□□□□□ -0.99
RPN5	YDL147W	SCJ1	P25303	377 aa		8.86	□□□□□ -0.99
RPN5	YDL147W	TUM1	Q08686	304 aa	Known RBP	8.86	□□□□□ -0.99
RPN5	YDL147W	PML39	Q03760	334 aa		8.85	□□□□□ -0.99
RPN5	YDL147W	ARG8	P18544	423 aa		8.84	□□□□□ -0.99
RPN5	YDL147W	RTG2	P32608	588 aa	Known RBP	8.84	□□□□□ -0.99
RPN5	YDL147W	SIT4	P20604	311 aa		8.83	□□□□□ -1
RPN5	YDL147W	YPR204W	Q08995	1032 aa		8.83	□□□□□ -1
RPN5	YDL147W	ERG12	P07277	443 aa		8.81	□□□□□ -1
RPN5	YDL147W	BIO2	P32451	375 aa		8.81	□□□□□ -1
RPN5	YDL147W	YNL108C	P53929	270 aa		8.81	□□□□□ -1
RPN5	YDL147W	ELP4	Q02884	456 aa	Known RBP	8.81	□□□□□ -1
RPN5	YDL147W	DPL1	Q05567	589 aa		8.81	□□□□□ -1
RPN5	YDL147W	YJU3	P28321	313 aa		8.8	□□□□□ -1
RPN5	YDL147W	SLX8	P40072	274 aa		8.8	□□□□□ -1
RPN5	YDL147W	SLY41	P22215	453 aa		8.8	□□□□□ -1
RPN5	YDL147W	YRR1	Q12172	810 aa		8.79	□□□□□ -1
RPN5	YDL147W	CPS1	P27614	576 aa		8.78	□□□□□ -1
RPN5	YDL147W	YML020W	Q03722	664 aa		8.78	□□□□□ -1
RPN5	YDL147W	SPT5	P27692	1063 aa	Known RBP	8.77	□□□□□ -1.01
RPN5	YDL147W	TTI1	P36097	1038 aa		8.77	□□□□□ -1.01
RPN5	YDL147W	YNL115C	P53925	644 aa		8.77	□□□□□ -1.01
RPN5	YDL147W	LAM6	Q08001	693 aa		8.77	□□□□□ -1.01
RPN5	YDL147W	RPL34A	P87262	121 aa	Predicted RBP	8.76	□□□□□ -1.01
RPN5	YDL147W	PEX29	Q03370	554 aa		8.76	□□□□□ -1.01
RPN5	YDL147W	ISU2	Q12056	156 aa		8.76	□□□□□ -1.01
RPN5	YDL147W	SUP45	P12385	437 aa	Known RBP	8.75	□□□□□ -1.01
RPN5	YDL147W	MID1	P41821	548 aa		8.75	□□□□□ -1.01
RPN5	YDL147W	RTF1	P53064	558 aa		8.75	□□□□□ -1.01
RPN5	YDL147W	ARH1	P48360	493 aa		8.74	□□□□□ -1.01
RPN5	YDL147W	MPC54	Q08550	464 aa		8.74	□□□□□ -1.01
RPN5	YDL147W	DPS1	P04802	557 aa	Known RBP	8.73	□□□□□ -1.01
RPN5	YDL147W	RSC30	P38781	883 aa		8.72	□□□□□ -1.01
RPN5	YDL147W	MAK16	P10962	306 aa	Predicted RBP	8.71	□□□□□ -1.02
RPN5	YDL147W	SIS2	P36024	562 aa		8.71	□□□□□ -1.02
RPN5	YDL147W	NMA111	P53920	997 aa		8.7	□□□□□ -1.02
RPN5	YDL147W	YDJ1	P25491	409 aa	Known RBP	8.69	□□□□□ -1.02
RPN5	YDL147W	NPL4	P33755	580 aa		8.69	□□□□□ -1.02
RPN5	YDL147W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	8.69	□□□□□ -1.02	not detected
RPN5	YDL147W	PUS6	P53294	404 aa		8.69	□□□□□ -1.02
RPN5	YDL147W	ENO2	P00925	437 aa	Known RBP	8.68	□□□□□ -1.02
RPN5	YDL147W	ENO1	P00924	437 aa	Known RBP	8.67	□□□□□ -1.02
RPN5	YDL147W	NOP8	Q08287	484 aa	Predicted RBP	8.67	□□□□□ -1.02
RPN5	YDL147W	TRM1	P15565	570 aa	Known RBP	8.66	□□□□□ -1.02
RPN5	YDL147W	YPP1	P46951	817 aa		8.66	□□□□□ -1.02
RPN5	YDL147W	KEX2	P13134	814 aa		8.65	□□□□□ -1.02
RPN5	YDL147W	NUD1	P32336	851 aa		8.65	□□□□□ -1.02
RPN5	YDL147W	SLD2	P34252	453 aa		8.65	□□□□□ -1.02
RPN5	YDL147W	TBF1	Q02457	562 aa		8.65	□□□□□ -1.02
RPN5	YDL147W	NOB1	Q08444	459 aa	Known RBP	8.65	□□□□□ -1.02
RPN5	YDL147W	CDC3	P32457	520 aa	Known RBP	8.63	□□□□□ -1.03
RPN5	YDL147W	NAF1	P53919	492 aa	Known RBP	8.63	□□□□□ -1.03
RPN5	YDL147W	MRX10	Q05648	414 aa		8.63	□□□□□ -1.03
RPN5	YDL147W	SPT23	P35210	1082 aa		8.62	□□□□□ -1.03
RPN5	YDL147W	RIM21	P48565	533 aa		8.62	□□□□□ -1.03
RPN5	YDL147W	PUP1	P25043	261 aa		8.59	□□□□□ -1.03
RPN5	YDL147W	ERF2	Q06551	359 aa		8.59	□□□□□ -1.03
RPN5	YDL147W	SRC1	Q03707	834 aa		8.58	□□□□□ -1.04
RPN5	YDL147W	TGL4	P36165	910 aa		8.57	□□□□□ -1.04
RPN5	YDL147W	GCD11	P32481	527 aa	Known RBP	8.56	□□□□□ -1.04
RPN5	YDL147W	HAP5	Q02516	242 aa		8.56	□□□□□ -1.04
RPN5	YDL147W	ENV9	Q08651	330 aa		8.56	□□□□□ -1.04
RPN5	YDL147W	PDR1	P12383	1068 aa		8.55	□□□□□ -1.04
RPN5	YDL147W	YML083C	Q04526	418 aa		8.55	□□□□□ -1.04
RPN5	YDL147W	MCM16	Q12262	181 aa		8.55	□□□□□ -1.04
RPN5	YDL147W	YDL206W	Q12424	762 aa		8.54	□□□□□ -1.04
RPN5	YDL147W	KTR7	P40504	517 aa		8.53	□□□□□ -1.04
RPN5	YDL147W	ISM1	P48526	1002 aa		8.53	□□□□□ -1.04
RPN5	YDL147W	BNI4	P53858	892 aa		8.53	□□□□□ -1.04
RPN5	YDL147W	RAM1	P22007	431 aa		8.52	□□□□□ -1.05
RPN5	YDL147W	ECM23	Q02710	187 aa		8.52	□□□□□ -1.05
RPN5	YDL147W	PEP12	P32854	288 aa		8.51	□□□□□ -1.05
RPN5	YDL147W	EMP47	P43555	445 aa		8.51	□□□□□ -1.05
RPN5	YDL147W	STR2	P47164	639 aa		8.51	□□□□□ -1.05
RPN5	YDL147W	RPA14	P50106	137 aa		8.51	□□□□□ -1.05
RPN5	YDL147W	TUB4	P53378	473 aa		8.51	□□□□□ -1.05
RPN5	YDL147W	ISF1	P32488	338 aa		8.5	□□□□□ -1.05
RPN5	YDL147W	ATG3	P40344	310 aa		8.5	□□□□□ -1.05
RPN5	YDL147W	YML082W	Q04533	649 aa	Known RBP	8.5	□□□□□ -1.05
RPN5	YDL147W	RGA2	Q06407	1009 aa		8.5	□□□□□ -1.05
RPN5	YDL147W	ALR1	Q08269	859 aa		8.5	□□□□□ -1.05
RPN5	YDL147W	STE20	Q03497	939 aa	Known RBP	8.49	□□□□□ -1.05
RPN5	YDL147W	HAT1	Q12341	374 aa		8.49	□□□□□ -1.05
RPN5	YDL147W	RDS2	P19541	446 aa	Known RBP	8.48	□□□□□ -1.05
RPN5	YDL147W	GUT2	P32191	649 aa		8.48	□□□□□ -1.05
RPN5	YDL147W	MRX12	P47084	519 aa		8.48	□□□□□ -1.05
RPN5	YDL147W	TEC1	P18412	486 aa		8.47	□□□□□ -1.05
RPN5	YDL147W	PAT1	P25644	796 aa	Known RBP	8.47	□□□□□ -1.05
RPN5	YDL147W	SSF1	P38789	453 aa	Predicted RBP	8.47	□□□□□ -1.05
RPN5	YDL147W	PTC2	P39966	464 aa	Known RBP	8.47	□□□□□ -1.05
RPN5	YDL147W	YPR097W	Q06839	1073 aa		8.47	□□□□□ -1.05
RPN5	YDL147W	GAL2	P13181	574 aa		8.46	□□□□□ -1.06
RPN5	YDL147W	AGE1	Q04412	482 aa		8.46	□□□□□ -1.06
RPN5	YDL147W	UBX7	P38349	436 aa		8.45	□□□□□ -1.06
RPN5	YDL147W	KXD1	P53158	218 aa		8.45	□□□□□ -1.06
RPN5	YDL147W	BUD20	Q08004	166 aa	Predicted RBP	8.45	□□□□□ -1.06

Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms