RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C TRM732Q03496 1420 aa7.12□□□□□ -1.27
RXT3YDL076C SAS4Q04003 481 aa7.12□□□□□ -1.27
RXT3YDL076C GBP2P25555 427 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
RXT3YDL076C GAR1P28007 205 aaKnown RBP7.11□□□□□ -1.27
RXT3YDL076C CDC73Q06697 393 aa7.11□□□□□ -1.27
RXT3YDL076C RPA190P10964 1664 aaKnown RBP7.1□□□□□ -1.27
RXT3YDL076C DNF1P32660 1571 aa7.1□□□□□ -1.27
RXT3YDL076C TY2B-LR1P0C2J3 1770 aa7.1□□□□□ -1.27
RXT3YDL076C TY2B-FP0CX63 1770 aa7.1□□□□□ -1.27
RXT3YDL076C TY2B-GR2P0CX64 1770 aa7.1□□□□□ -1.27
RXT3YDL076C TY2B-CP25384 1770 aa7.1□□□□□ -1.27
RXT3YDL076C TY2B-DR2Q03494 1770 aa7.1□□□□□ -1.27
RXT3YDL076C TY1B-DR1Q03855 1755 aa7.1□□□□□ -1.27
RXT3YDL076C TY2B-DR3Q07791 1770 aaKnown RBP7.1□□□□□ -1.27
RXT3YDL076C TY2B-OR1Q12113 1770 aa7.1□□□□□ -1.27
RXT3YDL076C TY2B-DR1Q12472 1770 aa7.1□□□□□ -1.27
RXT3YDL076C TY2B-OR2Q12501 1770 aa7.1□□□□□ -1.27
RXT3YDL076C MMS22Q06164 1454 aa7.09□□□□□ -1.27
RXT3YDL076C KEX1P09620 729 aa7.07□□□□□ -1.28
RXT3YDL076C NOP53Q12080 455 aaKnown RBP7.07□□□□□ -1.28
RXT3YDL076C TY1B-BRQ12193 1756 aa7.07□□□□□ -1.28
RXT3YDL076C TY1B-GR3Q12316 1755 aa7.07□□□□□ -1.28
RXT3YDL076C TY1B-ORQ92393 1755 aa7.07□□□□□ -1.28
RXT3YDL076C BRE2P43132 505 aa7.06□□□□□ -1.28
RXT3YDL076C ITT1Q04638 464 aa7.04□□□□□ -1.28
RXT3YDL076C DRS2P39524 1355 aa7.04□□□□□ -1.28
RXT3YDL076C MRF1P30775 413 aaPredicted RBP7.03□□□□□ -1.28
RXT3YDL076C POL1P13382 1468 aa7.03□□□□□ -1.28
RXT3YDL076C SMC4Q12267 1418 aa7.02□□□□□ -1.29
RXT3YDL076C SET1P38827 1080 aaKnown RBP7.02□□□□□ -1.29
RXT3YDL076C TY1B-HO13535 1793 aa7.02□□□□□ -1.29
RXT3YDL076C TY1B-DR5P0C2I2 1755 aa7.02□□□□□ -1.29
RXT3YDL076C TY1B-DR6P0C2I3 1755 aa7.02□□□□□ -1.29
RXT3YDL076C TY1B-LR2P0C2I5 1755 aa7.02□□□□□ -1.29
RXT3YDL076C TY1B-LR3P0C2I6 1755 aaKnown RBP7.02□□□□□ -1.29
RXT3YDL076C TY1B-PR1P0C2I9 1755 aaKnown RBP7.02□□□□□ -1.29
RXT3YDL076C TY1B-PR2P0C2J0 1756 aa7.02□□□□□ -1.29
RXT3YDL076C TY1B-PR3P0C2J1 1755 aaKnown RBP7.02□□□□□ -1.29
RXT3YDL076C TY1B-JR1P47098 1755 aa7.02□□□□□ -1.29
RXT3YDL076C TY1B-ML2Q03434 1755 aaKnown RBP7.02□□□□□ -1.29
RXT3YDL076C TY1B-ER1Q03612 1755 aa7.02□□□□□ -1.29
RXT3YDL076C TY1B-ML1Q04711 1755 aaKnown RBP7.02□□□□□ -1.29
RXT3YDL076C TY1B-GR2Q12269 1755 aa7.02□□□□□ -1.29
RXT3YDL076C TY1B-OLQ12273 1755 aa7.02□□□□□ -1.29
RXT3YDL076C TY1B-PLQ12414 1755 aaKnown RBP7.02□□□□□ -1.29
RXT3YDL076C TY2B-BQ12491 1770 aa7.02□□□□□ -1.29
RXT3YDL076C SPP41P38904 1435 aa7.01□□□□□ -1.29
RXT3YDL076C AIR1P40507 360 aaKnown RBP7□□□□□ -1.29
RXT3YDL076C GCR2Q01722 534 aa7□□□□□ -1.29
RXT3YDL076C MMS1Q06211 1407 aa7□□□□□ -1.29
RXT3YDL076C NUP159P40477 1460 aa6.99□□□□□ -1.29
RXT3YDL076C YOR1P53049 1477 aa6.98□□□□□ -1.29
RXT3YDL076C TY1B-DR3Q99231 1755 aa6.98□□□□□ -1.29
RXT3YDL076C STU1P38198 1513 aa6.98□□□□□ -1.29
RXT3YDL076C VPS15P22219 1454 aa6.98□□□□□ -1.29
RXT3YDL076C IFH1P39520 1085 aa6.97□□□□□ -1.29
RXT3YDL076C BNI1P41832 1953 aa6.97□□□□□ -1.29
RXT3YDL076C SPB4P25808 606 aaPredicted RBP6.96□□□□□ -1.3
RXT3YDL076C RPN1P38764 993 aaKnown RBP6.96□□□□□ -1.3
RXT3YDL076C CKB1P43639 278 aa6.96□□□□□ -1.3
RXT3YDL076C VPS70P47161 811 aa6.96□□□□□ -1.3
RXT3YDL076C TSC11P40061 1430 aa6.95□□□□□ -1.3
RXT3YDL076C ERG12P07277 443 aa6.94□□□□□ -1.3
RXT3YDL076C CLA4P48562 842 aa6.94□□□□□ -1.3
RXT3YDL076C YPR148CQ06523 435 aa6.94□□□□□ -1.3
RXT3YDL076C RTT106P40161 455 aa6.93□□□□□ -1.3
RXT3YDL076C BUD20Q08004 166 aaPredicted RBP6.93□□□□□ -1.3
RXT3YDL076C YTA7P40340 1379 aa6.93□□□□□ -1.3
RXT3YDL076C MYO4P32492 1471 aa6.92□□□□□ -1.3
RXT3YDL076C VTH1P40438 1549 aa6.92□□□□□ -1.3
RXT3YDL076C VTH2P40890 1549 aa6.92□□□□□ -1.3
RXT3YDL076C PRT1P06103 763 aaKnown RBP6.92□□□□□ -1.3
RXT3YDL076C MET10P39692 1035 aa6.92□□□□□ -1.3
RXT3YDL076C NTE1Q04958 1679 aa6.92□□□□□ -1.3
RXT3YDL076C STH1P32597 1359 aa6.92□□□□□ -1.3
RXT3YDL076C CST6P40535 587 aa6.9□□□□□ -1.3
RXT3YDL076C YLR326WQ06170 240 aaKnown RBP6.9□□□□□ -1.3
RXT3YDL076C YRF1-1P0CX20 1796 aa6.9□□□□□ -1.31
RXT3YDL076C YRF1-5P0CX21 1796 aa6.9□□□□□ -1.31
RXT3YDL076C YRF1-8P0CX22 1796 aa6.9□□□□□ -1.31
RXT3YDL076C RPP1BP10622 106 aaKnown RBP6.89□□□□□ -1.31
RXT3YDL076C VHR2P40041 505 aa6.89□□□□□ -1.31
RXT3YDL076C PCS60P38137 543 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
RXT3YDL076C TY1B-JR2P47100 1755 aaKnown RBP6.87□□□□□ -1.31
RXT3YDL076C TY1B-ER2Q03619 1755 aa6.87□□□□□ -1.31
RXT3YDL076C TY1B-MR1Q04214 1755 aa6.87□□□□□ -1.31
RXT3YDL076C TY1B-MR2Q04670 1755 aaKnown RBP6.87□□□□□ -1.31
RXT3YDL076C TY1B-LR1Q12088 1755 aaKnown RBP6.87□□□□□ -1.31
RXT3YDL076C TY1B-NL1Q12112 1755 aa6.87□□□□□ -1.31
RXT3YDL076C TY1B-GR1Q12141 1755 aa6.87□□□□□ -1.31
RXT3YDL076C TY1B-BLQ12490 1755 aa6.87□□□□□ -1.31
RXT3YDL076C RPO21P04050 1733 aaKnown RBP6.87□□□□□ -1.31
RXT3YDL076C NUP170P38181 1502 aa6.86□□□□□ -1.31
RXT3YDL076C UBP14P38237 781 aaKnown RBP6.86□□□□□ -1.31
RXT3YDL076C STR2P47164 639 aa6.86□□□□□ -1.31
RXT3YDL076C RAD54P32863 898 aa6.85□□□□□ -1.31
RXT3YDL076C YRR1Q12172 810 aa6.85□□□□□ -1.31
RXT3YDL076C MET22P32179 357 aa6.84□□□□□ -1.31
RXT3YDL076C SNT2P53127 1403 aa6.84□□□□□ -1.32
RXT3YDL076C ISM1P48526 1002 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms