RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C NMA111P53920 997 aa7.03□□□□□ -1.28
RPN4YDL020C ELP4Q02884 456 aaKnown RBP7.03□□□□□ -1.28
RPN4YDL020C RGA1P39083 1007 aa7.03□□□□□ -1.28
RPN4YDL020C MMP1Q12372 583 aa7.03□□□□□ -1.28
RPN4YDL020C SIT4P20604 311 aa7.02□□□□□ -1.29
RPN4YDL020C SRC1Q03707 834 aa7.02□□□□□ -1.29
RPN4YDL020C SCJ1P25303 377 aa7.01□□□□□ -1.29
RPN4YDL020C ESS1P22696 170 aa7□□□□□ -1.29
RPN4YDL020C PKH3Q03306 898 aaPredicted RBP6.99□□□□□ -1.29
RPN4YDL020C YJL007CP47080 104 aa6.98□□□□□ -1.29
RPN4YDL020C YJU3P28321 313 aa6.96□□□□□ -1.29
RPN4YDL020C BIM1P40013 344 aa6.96□□□□□ -1.29
RPN4YDL020C RAD59Q12223 238 aa6.96□□□□□ -1.29
RPN4YDL020C YBL036CP38197 257 aa6.95□□□□□ -1.3
RPN4YDL020C ARH1P48360 493 aa6.95□□□□□ -1.3
RPN4YDL020C HAP5Q02516 242 aa6.95□□□□□ -1.3
RPN4YDL020C SLY41P22215 453 aa6.95□□□□□ -1.3
RPN4YDL020C NUD1P32336 851 aa6.95□□□□□ -1.3
RPN4YDL020C RTF1P53064 558 aa6.95□□□□□ -1.3
RPN4YDL020C YNL115CP53925 644 aa6.95□□□□□ -1.3
RPN4YDL020C PDR1P12383 1068 aa6.94□□□□□ -1.3
RPN4YDL020C ARG8P18544 423 aa6.93□□□□□ -1.3
RPN4YDL020C ATG32P40458 529 aa6.93□□□□□ -1.3
RPN4YDL020C KEX2P13134 814 aa6.92□□□□□ -1.3
RPN4YDL020C NPL4P33755 580 aa6.91□□□□□ -1.3
RPN4YDL020C CSE4P36012 229 aa6.91□□□□□ -1.3
RPN4YDL020C ERF2Q06551 359 aa6.9□□□□□ -1.31
RPN4YDL020C LAM6Q08001 693 aa6.9□□□□□ -1.31
RPN4YDL020C BIO2P32451 375 aa6.89□□□□□ -1.31
RPN4YDL020C RSC30P38781 883 aa6.89□□□□□ -1.31
RPN4YDL020C RPL34BP40525 121 aaKnown RBP6.89□□□□□ -1.31
RPN4YDL020C STR2P47164 639 aa6.89□□□□□ -1.31
RPN4YDL020C ISM1P48526 1002 aa6.89□□□□□ -1.31
RPN4YDL020C BNI4P53858 892 aa6.88□□□□□ -1.31
RPN4YDL020C TIF1P10081 395 aaKnown RBP6.87□□□□□ -1.31
RPN4YDL020C SPT23P35210 1082 aa6.87□□□□□ -1.31
RPN4YDL020C TRM1P15565 570 aaKnown RBP6.86□□□□□ -1.31
RPN4YDL020C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
RPN4YDL020C PUS6P53294 404 aa6.86□□□□□ -1.31
RPN4YDL020C YNL108CP53929 270 aa6.86□□□□□ -1.31
RPN4YDL020C RAM1P22007 431 aa6.85□□□□□ -1.31
RPN4YDL020C ERG12P07277 443 aa6.84□□□□□ -1.31
RPN4YDL020C GCD11P32481 527 aaKnown RBP6.84□□□□□ -1.31
RPN4YDL020C MAK16P10962 306 aaPredicted RBP6.83□□□□□ -1.32
RPN4YDL020C TY1A-DR4O74302 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-HP0C2I4 478 aaKnown RBP6.82□□□□□ -1.32
RPN4YDL020C TY1A-AP0CX57 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-PR1P0CX58 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-ORP0CX59 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-PR2P0CX60 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-DR5P0CX65 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-ER2P0CX66 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-GR3P0CX67 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-LR1P0CX68 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-MR2P0CX69 440 aa6.82□□□□□ -1.32
RPN4YDL020C SPT5P27692 1063 aaKnown RBP6.82□□□□□ -1.32
RPN4YDL020C PTC2P39966 464 aaKnown RBP6.82□□□□□ -1.32
RPN4YDL020C TY1A-JR2P47099 440 aa6.82□□□□□ -1.32
RPN4YDL020C TBF1Q02457 562 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-DR1Q03856 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-ML1Q04706 440 aaKnown RBP6.82□□□□□ -1.32
RPN4YDL020C BUD20Q08004 166 aaPredicted RBP6.82□□□□□ -1.32
RPN4YDL020C TY1A-BRQ12217 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-NL2Q12470 440 aa6.82□□□□□ -1.32
RPN4YDL020C TY1A-GR2Q12485 440 aa6.82□□□□□ -1.32
RPN4YDL020C SUP45P12385 437 aaKnown RBP6.82□□□□□ -1.32
RPN4YDL020C SEC2P17065 759 aa6.82□□□□□ -1.32
RPN4YDL020C RTG2P32608 588 aaKnown RBP6.82□□□□□ -1.32
RPN4YDL020C YPR204WQ08995 1032 aa6.82□□□□□ -1.32
RPN4YDL020C TUB4P53378 473 aa6.81□□□□□ -1.32
RPN4YDL020C AGE1Q04412 482 aa6.81□□□□□ -1.32
RPN4YDL020C YPR015CQ12531 247 aa6.81□□□□□ -1.32
RPN4YDL020C YDJ1P25491 409 aaKnown RBP6.8□□□□□ -1.32
RPN4YDL020C YML082WQ04533 649 aaKnown RBP6.78□□□□□ -1.32
RPN4YDL020C YDL206WQ12424 762 aa6.78□□□□□ -1.32
RPN4YDL020C ENO2P00925 437 aaKnown RBP6.78□□□□□ -1.32
RPN4YDL020C PRT1P06103 763 aaKnown RBP6.78□□□□□ -1.32
RPN4YDL020C SUB2Q07478 446 aaKnown RBP6.78□□□□□ -1.32
RPN4YDL020C SSA4P22202 642 aaKnown RBP6.76□□□□□ -1.33
RPN4YDL020C NAF1P53919 492 aaKnown RBP6.76□□□□□ -1.33
RPN4YDL020C CPS1P27614 576 aa6.75□□□□□ -1.33
RPN4YDL020C TTI1P36097 1038 aa6.75□□□□□ -1.33
RPN4YDL020C RPA14P50106 137 aa6.75□□□□□ -1.33
RPN4YDL020C PAC1P39946 494 aaKnown RBP6.74□□□□□ -1.33
RPN4YDL020C ENO1P00924 437 aaKnown RBP6.74□□□□□ -1.33
RPN4YDL020C RRN7P40992 514 aa6.74□□□□□ -1.33
RPN4YDL020C RIM21P48565 533 aa6.74□□□□□ -1.33
RPN4YDL020C SSA1P10591 642 aaKnown RBP6.73□□□□□ -1.33
RPN4YDL020C PAT1P25644 796 aaKnown RBP6.73□□□□□ -1.33
RPN4YDL020C MRX10Q05648 414 aa6.73□□□□□ -1.33
RPN4YDL020C YPR097WQ06839 1073 aa6.73□□□□□ -1.33
RPN4YDL020C ALR1Q08269 859 aa6.73□□□□□ -1.33
RPN4YDL020C RAS1P01119 309 aa6.72□□□□□ -1.33
RPN4YDL020C YPP1P46951 817 aa6.72□□□□□ -1.33
RPN4YDL020C MCM16Q12262 181 aa6.72□□□□□ -1.33
RPN4YDL020C PDC1P06169 563 aaKnown RBP6.7□□□□□ -1.34
RPN4YDL020C KXD1P53158 218 aa6.7□□□□□ -1.34
RPN4YDL020C SPT16P32558 1035 aaKnown RBP6.69□□□□□ -1.34
RPN4YDL020C SIS2P36024 562 aa6.69□□□□□ -1.34
RPN4YDL020C GEF1P37020 779 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms