RNA–Protein interactions for RNA: YDL002C

NHP10, Transcript of Non-essential INO80 chromatin remodeling complex subunit, yeastyeast

Gene NHP10, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NHP10YDL002C TY1A-MR2P0CX69 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-JR2P47099 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-DR1Q03856 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-ML1Q04706 440 aaKnown RBP8.4□□□□□ -1.06
NHP10YDL002C TY1A-BRQ12217 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-NL2Q12470 440 aa8.4□□□□□ -1.06
NHP10YDL002C TY1A-GR2Q12485 440 aa8.4□□□□□ -1.06
NHP10YDL002C SEC2P17065 759 aa8.38□□□□□ -1.07
NHP10YDL002C CST6P40535 587 aa8.35□□□□□ -1.07
NHP10YDL002C RRN7P40992 514 aa8.35□□□□□ -1.07
NHP10YDL002C PAT1P25644 796 aaKnown RBP8.33□□□□□ -1.08
NHP10YDL002C DMA1P38823 416 aa8.33□□□□□ -1.08
NHP10YDL002C KEX2P13134 814 aa8.32□□□□□ -1.08
NHP10YDL002C MAM3Q12296 706 aa8.32□□□□□ -1.08
NHP10YDL002C PSE1P32337 1089 aaKnown RBP8.31□□□□□ -1.08
NHP10YDL002C FRK1Q03002 865 aaPredicted RBP8.31□□□□□ -1.08
NHP10YDL002C LAM6Q08001 693 aa8.3□□□□□ -1.08
NHP10YDL002C AIR1P40507 360 aaKnown RBP8.29□□□□□ -1.08
NHP10YDL002C CLA4P48562 842 aa8.29□□□□□ -1.08
NHP10YDL002C ERF2Q06551 359 aa8.29□□□□□ -1.08
NHP10YDL002C BDP1P46678 594 aa8.26□□□□□ -1.09
NHP10YDL002C CLB5P30283 435 aa8.25□□□□□ -1.09
NHP10YDL002C IES2P40154 320 aa8.25□□□□□ -1.09
NHP10YDL002C DSF2P38213 736 aa8.24□□□□□ -1.09
NHP10YDL002C SAS10Q12136 610 aaPredicted RBP8.24□□□□□ -1.09
NHP10YDL002C RQC2Q12532 1038 aaKnown RBP8.23□□□□□ -1.09
NHP10YDL002C RGA1P39083 1007 aa8.22□□□□□ -1.09
NHP10YDL002C BRE2P43132 505 aa8.22□□□□□ -1.09
NHP10YDL002C SPB4P25808 606 aaPredicted RBP8.2□□□□□ -1.1
NHP10YDL002C GCR2Q01722 534 aa8.2□□□□□ -1.1
NHP10YDL002C PAC1P39946 494 aaKnown RBP8.19□□□□□ -1.1
NHP10YDL002C CDC4P07834 779 aa8.18□□□□□ -1.1
NHP10YDL002C TEA1P47988 759 aa8.17□□□□□ -1.1
NHP10YDL002C NUP42P49686 430 aaKnown RBP8.17□□□□□ -1.1
NHP10YDL002C TUB4P53378 473 aa8.16□□□□□ -1.1
NHP10YDL002C RTF1P53064 558 aa8.15□□□□□ -1.1
NHP10YDL002C YNL115CP53925 644 aa8.15□□□□□ -1.1
NHP10YDL002C HED1Q03937 162 aa8.15□□□□□ -1.1
NHP10YDL002C AGE1Q04412 482 aa8.14□□□□□ -1.11
NHP10YDL002C DIT2P21595 489 aa8.12□□□□□ -1.11
NHP10YDL002C MOD5P07884 428 aa8.11□□□□□ -1.11
NHP10YDL002C SIT4P20604 311 aa8.11□□□□□ -1.11
NHP10YDL002C NIS1P53939 407 aa8.11□□□□□ -1.11
NHP10YDL002C GAR1P28007 205 aaKnown RBP8.1□□□□□ -1.11
NHP10YDL002C PUS5Q06244 254 aa8.1□□□□□ -1.11
NHP10YDL002C GBP2P25555 427 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11 RIP-Chip
NHP10YDL002C RGA2Q06407 1009 aa8.09□□□□□ -1.11
NHP10YDL002C YMR196WQ04336 1088 aa8.05□□□□□ -1.12
NHP10YDL002C MET32Q12041 191 aa8.05□□□□□ -1.12
NHP10YDL002C SLY41P22215 453 aa8.04□□□□□ -1.12
NHP10YDL002C ASH1P34233 588 aa8.04□□□□□ -1.12
NHP10YDL002C KXD1P53158 218 aa8.04□□□□□ -1.12
NHP10YDL002C YPL062WQ02781 134 aa8.04□□□□□ -1.12
NHP10YDL002C HST3P53687 447 aa8.03□□□□□ -1.12
NHP10YDL002C FPK1P53739 893 aa8.03□□□□□ -1.12
NHP10YDL002C MET22P32179 357 aa8.01□□□□□ -1.13
NHP10YDL002C AFT1P22149 690 aa8□□□□□ -1.13
NHP10YDL002C HXT10P43581 546 aa7.99□□□□□ -1.13
NHP10YDL002C PDC1P06169 563 aaKnown RBP7.97□□□□□ -1.13
NHP10YDL002C ENV9Q08651 330 aa7.97□□□□□ -1.13
NHP10YDL002C TPD3P31383 635 aa7.96□□□□□ -1.14
NHP10YDL002C RRD1P40454 393 aaKnown RBP7.96□□□□□ -1.14
NHP10YDL002C TBF1Q02457 562 aa7.96□□□□□ -1.14
NHP10YDL002C SCJ1P25303 377 aa7.95□□□□□ -1.14
NHP10YDL002C ATF2P53296 535 aa7.95□□□□□ -1.14
NHP10YDL002C SYH1Q02875 849 aaKnown RBP7.95□□□□□ -1.14
NHP10YDL002C PUS6P53294 404 aa7.94□□□□□ -1.14
NHP10YDL002C YDR444WQ04093 687 aa7.94□□□□□ -1.14
NHP10YDL002C ALR1Q08269 859 aa7.93□□□□□ -1.14
NHP10YDL002C YDL206WQ12424 762 aa7.93□□□□□ -1.14
NHP10YDL002C HST2P53686 357 aa7.92□□□□□ -1.14
NHP10YDL002C YJR115WP47152 169 aa7.91□□□□□ -1.14
NHP10YDL002C RPA14P50106 137 aa7.91□□□□□ -1.14
NHP10YDL002C MMP1Q12372 583 aa7.91□□□□□ -1.14
NHP10YDL002C TRM1P15565 570 aaKnown RBP7.9□□□□□ -1.14
NHP10YDL002C KIP2P28743 706 aa7.9□□□□□ -1.14
NHP10YDL002C LCB5Q06147 687 aaKnown RBP7.88□□□□□ -1.15
NHP10YDL002C YPR097WQ06839 1073 aa7.88□□□□□ -1.15
NHP10YDL002C GLN1P32288 370 aaKnown RBP7.87□□□□□ -1.15
NHP10YDL002C GLC3P32775 704 aa7.87□□□□□ -1.15
NHP10YDL002C IXR1P33417 597 aa7.86□□□□□ -1.15
NHP10YDL002C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
NHP10YDL002C MSB3P48566 633 aaPredicted RBP7.86□□□□□ -1.15
NHP10YDL002C YNR021WP53723 404 aaKnown RBP7.86□□□□□ -1.15
NHP10YDL002C ESS1P22696 170 aa7.85□□□□□ -1.15
NHP10YDL002C UGA3P26370 528 aa7.85□□□□□ -1.15
NHP10YDL002C TYW1Q08960 810 aaKnown RBP7.82□□□□□ -1.16
NHP10YDL002C SRF1Q12516 437 aa7.81□□□□□ -1.16
NHP10YDL002C YJU3P28321 313 aa7.8□□□□□ -1.16
NHP10YDL002C PTK2P47116 818 aaKnown RBP7.78□□□□□ -1.16
NHP10YDL002C YDL176WQ12027 708 aa7.77□□□□□ -1.17
NHP10YDL002C MRT4P33201 236 aaKnown RBP7.76□□□□□ -1.17
NHP10YDL002C PKH3Q03306 898 aaPredicted RBP7.75□□□□□ -1.17
NHP10YDL002C YLR346CQ06139 101 aa7.74□□□□□ -1.17
NHP10YDL002C VAC17P25591 423 aa7.72□□□□□ -1.17
NHP10YDL002C KTR1P27810 393 aaKnown RBP7.72□□□□□ -1.17
NHP10YDL002C RSC30P38781 883 aa7.72□□□□□ -1.17
NHP10YDL002C OPT2Q06593 877 aa7.72□□□□□ -1.17
NHP10YDL002C AIM7Q12156 149 aa7.72□□□□□ -1.17
NHP10YDL002C ARG8P18544 423 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms