RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeastyeast

Gene SLX1, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX1YBR228W TY1A-ORP0CX59 440 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-PR2P0CX60 440 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-DR5P0CX65 440 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-ER2P0CX66 440 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-GR3P0CX67 440 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-LR1P0CX68 440 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-MR2P0CX69 440 aa10.01□□□□□ -0.81
SLX1YBR228W KEX2P13134 814 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-JR2P47099 440 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-DR1Q03856 440 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-ML1Q04706 440 aaKnown RBP10.01□□□□□ -0.81
SLX1YBR228W TY1A-BRQ12217 440 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-NL2Q12470 440 aa10.01□□□□□ -0.81
SLX1YBR228W TY1A-GR2Q12485 440 aa10.01□□□□□ -0.81
SLX1YBR228W YEL077CQ3E7X8 1277 aa10.01□□□□□ -0.81
SLX1YBR228W SPT16P32558 1035 aaKnown RBP9.99□□□□□ -0.81
SLX1YBR228W ERG12P07277 443 aa9.98□□□□□ -0.81
SLX1YBR228W SEC2P17065 759 aa9.98□□□□□ -0.81
SLX1YBR228W RRN7P40992 514 aa9.97□□□□□ -0.81
SLX1YBR228W TEA1P47988 759 aa9.97□□□□□ -0.81
SLX1YBR228W ERF2Q06551 359 aa9.95□□□□□ -0.82
SLX1YBR228W PAT1P25644 796 aaKnown RBP9.93□□□□□ -0.82
SLX1YBR228W SRC1Q03707 834 aa9.93□□□□□ -0.82
SLX1YBR228W NIS1P53939 407 aa9.88□□□□□ -0.83
SLX1YBR228W CST6P40535 587 aa9.86□□□□□ -0.83
SLX1YBR228W ATF2P53296 535 aa9.86□□□□□ -0.83
SLX1YBR228W FRK1Q03002 865 aaPredicted RBP9.86□□□□□ -0.83
SLX1YBR228W YMR196WQ04336 1088 aa9.86□□□□□ -0.83
SLX1YBR228W GLC3P32775 704 aa9.84□□□□□ -0.83
SLX1YBR228W YNL115CP53925 644 aa9.84□□□□□ -0.83
SLX1YBR228W RTF1P53064 558 aa9.83□□□□□ -0.84
SLX1YBR228W TRK1P12685 1235 aa9.81□□□□□ -0.84
SLX1YBR228W PAC1P39946 494 aaKnown RBP9.81□□□□□ -0.84
SLX1YBR228W TUB4P53378 473 aa9.81□□□□□ -0.84
SLX1YBR228W SIT4P20604 311 aa9.8□□□□□ -0.84
SLX1YBR228W YNR021WP53723 404 aaKnown RBP9.8□□□□□ -0.84
SLX1YBR228W LAM6Q08001 693 aa9.8□□□□□ -0.84
SLX1YBR228W BDP1P46678 594 aa9.79□□□□□ -0.84
SLX1YBR228W FPK1P53739 893 aa9.79□□□□□ -0.84
SLX1YBR228W SLY41P22215 453 aa9.77□□□□□ -0.85
SLX1YBR228W AGE1Q04412 482 aa9.77□□□□□ -0.85
SLX1YBR228W CLA4P48562 842 aa9.75□□□□□ -0.85
SLX1YBR228W AIR1P40507 360 aaKnown RBP9.74□□□□□ -0.85
SLX1YBR228W SCJ1P25303 377 aa9.72□□□□□ -0.85
SLX1YBR228W TBF1Q02457 562 aa9.69□□□□□ -0.86
SLX1YBR228W KXD1P53158 218 aa9.67□□□□□ -0.86
SLX1YBR228W HST2P53686 357 aa9.67□□□□□ -0.86
SLX1YBR228W MMP1Q12372 583 aa9.67□□□□□ -0.86
SLX1YBR228W MOD5P07884 428 aa9.66□□□□□ -0.86
SLX1YBR228W PUS5Q06244 254 aa9.66□□□□□ -0.86
SLX1YBR228W GLN1P32288 370 aaKnown RBP9.65□□□□□ -0.86
SLX1YBR228W AIM7Q12156 149 aa9.64□□□□□ -0.87
SLX1YBR228W ESS1P22696 170 aa9.63□□□□□ -0.87
SLX1YBR228W TYW1Q08960 810 aaKnown RBP9.63□□□□□ -0.87
SLX1YBR228W PUS6P53294 404 aa9.62□□□□□ -0.87
SLX1YBR228W HED1Q03937 162 aa9.62□□□□□ -0.87
SLX1YBR228W YDL206WQ12424 762 aa9.62□□□□□ -0.87
SLX1YBR228W TRM1P15565 570 aaKnown RBP9.61□□□□□ -0.87
SLX1YBR228W CDC4P07834 779 aa9.6□□□□□ -0.87
SLX1YBR228W PDC1P06169 563 aaKnown RBP9.59□□□□□ -0.87
SLX1YBR228W LEU3P08638 886 aa9.58□□□□□ -0.88
SLX1YBR228W BRE2P43132 505 aa9.58□□□□□ -0.88
SLX1YBR228W HXT10P43581 546 aa9.58□□□□□ -0.88
SLX1YBR228W ALR1Q08269 859 aa9.58□□□□□ -0.88
SLX1YBR228W RRD1P40454 393 aaKnown RBP9.57□□□□□ -0.88
SLX1YBR228W YJU3P28321 313 aa9.56□□□□□ -0.88
SLX1YBR228W RPA14P50106 137 aa9.55□□□□□ -0.88
SLX1YBR228W PKH3Q03306 898 aaPredicted RBP9.55□□□□□ -0.88
SLX1YBR228W GCR2Q01722 534 aa9.54□□□□□ -0.88
SLX1YBR228W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.53□□□□□ -0.88not detected
SLX1YBR228W CSN12P47130 423 aa9.53□□□□□ -0.88
SLX1YBR228W KTR1P27810 393 aaKnown RBP9.52□□□□□ -0.89
SLX1YBR228W TPD3P31383 635 aa9.52□□□□□ -0.89
SLX1YBR228W MET32Q12041 191 aa9.52□□□□□ -0.89
SLX1YBR228W SYH1Q02875 849 aaKnown RBP9.51□□□□□ -0.89
SLX1YBR228W YPR097WQ06839 1073 aa9.51□□□□□ -0.89
SLX1YBR228W KIN1P13185 1064 aa9.5□□□□□ -0.89
SLX1YBR228W KIP2P28743 706 aa9.5□□□□□ -0.89
SLX1YBR228W ARG8P18544 423 aa9.49□□□□□ -0.89
SLX1YBR228W HST3P53687 447 aa9.49□□□□□ -0.89
SLX1YBR228W ASH1P34233 588 aa9.48□□□□□ -0.89
SLX1YBR228W RPN1P38764 993 aaKnown RBP9.45□□□□□ -0.9
SLX1YBR228W IXR1P33417 597 aa9.44□□□□□ -0.9
SLX1YBR228W AFT1P22149 690 aa9.43□□□□□ -0.9
SLX1YBR228W RSC30P38781 883 aa9.41□□□□□ -0.9
SLX1YBR228W SSA2P10592 639 aaKnown RBP9.4□□□□□ -0.9
SLX1YBR228W RAD59Q12223 238 aa9.4□□□□□ -0.9
SLX1YBR228W GAR1P28007 205 aaKnown RBP9.39□□□□□ -0.91
SLX1YBR228W GBP2P25555 427 aaKnown RBP RIP-Chip data9.37□□□□□ -0.91not detected
SLX1YBR228W UGA3P26370 528 aa9.34□□□□□ -0.91
SLX1YBR228W YJR115WP47152 169 aa9.34□□□□□ -0.91
SLX1YBR228W VAC17P25591 423 aa9.33□□□□□ -0.92
SLX1YBR228W GUA1P38625 525 aaKnown RBP9.32□□□□□ -0.92
SLX1YBR228W MSB3P48566 633 aaPredicted RBP9.32□□□□□ -0.92
SLX1YBR228W MET22P32179 357 aa9.31□□□□□ -0.92
SLX1YBR228W ITT1Q04638 464 aa9.31□□□□□ -0.92
SLX1YBR228W SRF1Q12516 437 aa9.29□□□□□ -0.92
SLX1YBR228W APP1P53933 587 aa9.28□□□□□ -0.92
SLX1YBR228W YDR444WQ04093 687 aa9.28□□□□□ -0.92
SLX1YBR228W MRT4P33201 236 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms