RNA–Protein interactions for RNA: YBR216C

YBP1, Transcript of Protein involved in cellular response to oxidative stress, yeastyeast

Gene YBP1, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBP1YBR216C TY1A-MR2P0CX69 440 aa5.41□□□□□ -1.54
YBP1YBR216C TY1A-JR2P47099 440 aa5.41□□□□□ -1.54
YBP1YBR216C TY1A-DR1Q03856 440 aa5.41□□□□□ -1.54
YBP1YBR216C TY1A-ML1Q04706 440 aaKnown RBP5.41□□□□□ -1.54
YBP1YBR216C TY1A-BRQ12217 440 aa5.41□□□□□ -1.54
YBP1YBR216C TY1A-NL2Q12470 440 aa5.41□□□□□ -1.54
YBP1YBR216C TY1A-GR2Q12485 440 aa5.41□□□□□ -1.54
YBP1YBR216C SPT16P32558 1035 aaKnown RBP5.4□□□□□ -1.54
YBP1YBR216C MAM3Q12296 706 aa5.4□□□□□ -1.54
YBP1YBR216C SEC2P17065 759 aa5.39□□□□□ -1.55
YBP1YBR216C PSE1P32337 1089 aaKnown RBP5.39□□□□□ -1.55
YBP1YBR216C SAS10Q12136 610 aaPredicted RBP5.39□□□□□ -1.55
YBP1YBR216C RRN7P40992 514 aa5.36□□□□□ -1.55
YBP1YBR216C PAT1P25644 796 aaKnown RBP5.36□□□□□ -1.55
YBP1YBR216C IES2P40154 320 aa5.36□□□□□ -1.55
YBP1YBR216C CST6P40535 587 aa5.36□□□□□ -1.55
YBP1YBR216C KEX2P13134 814 aa5.35□□□□□ -1.55
YBP1YBR216C CLB5P30283 435 aa5.35□□□□□ -1.55
YBP1YBR216C DSF2P38213 736 aa5.35□□□□□ -1.55
YBP1YBR216C ERF2Q06551 359 aa5.33□□□□□ -1.56
YBP1YBR216C LAM6Q08001 693 aa5.33□□□□□ -1.56
YBP1YBR216C FRK1Q03002 865 aaPredicted RBP5.33□□□□□ -1.56
YBP1YBR216C SPB4P25808 606 aaPredicted RBP5.32□□□□□ -1.56
YBP1YBR216C AIR1P40507 360 aaKnown RBP5.31□□□□□ -1.56
YBP1YBR216C CLA4P48562 842 aa5.31□□□□□ -1.56
YBP1YBR216C BDP1P46678 594 aa5.3□□□□□ -1.56
YBP1YBR216C NUP42P49686 430 aaKnown RBP5.3□□□□□ -1.56
YBP1YBR216C TEA1P47988 759 aa5.29□□□□□ -1.56
YBP1YBR216C RTF1P53064 558 aa5.28□□□□□ -1.56
YBP1YBR216C PAC1P39946 494 aaKnown RBP5.27□□□□□ -1.57
YBP1YBR216C BRE2P43132 505 aa5.27□□□□□ -1.57
YBP1YBR216C YNL115CP53925 644 aa5.26□□□□□ -1.57
YBP1YBR216C CDC4P07834 779 aa5.26□□□□□ -1.57
YBP1YBR216C DIT2P21595 489 aa5.26□□□□□ -1.57
YBP1YBR216C TUB4P53378 473 aa5.26□□□□□ -1.57
YBP1YBR216C GCR2Q01722 534 aa5.26□□□□□ -1.57
YBP1YBR216C AGE1Q04412 482 aa5.26□□□□□ -1.57
YBP1YBR216C SIT4P20604 311 aa5.24□□□□□ -1.57
YBP1YBR216C HED1Q03937 162 aa5.24□□□□□ -1.57
YBP1YBR216C NIS1P53939 407 aa5.24□□□□□ -1.57
YBP1YBR216C MOD5P07884 428 aa5.23□□□□□ -1.57
YBP1YBR216C RGA1P39083 1007 aa5.23□□□□□ -1.57
YBP1YBR216C YMR196WQ04336 1088 aa5.21□□□□□ -1.57
YBP1YBR216C KXD1P53158 218 aa5.19□□□□□ -1.58
YBP1YBR216C FPK1P53739 893 aa5.19□□□□□ -1.58
YBP1YBR216C PUS5Q06244 254 aa5.19□□□□□ -1.58
YBP1YBR216C SLY41P22215 453 aa5.19□□□□□ -1.58
YBP1YBR216C MET32Q12041 191 aa5.17□□□□□ -1.58
YBP1YBR216C GAR1P28007 205 aaKnown RBP5.16□□□□□ -1.58
YBP1YBR216C ATF2P53296 535 aa5.16□□□□□ -1.58
YBP1YBR216C GBP2P25555 427 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
YBP1YBR216C ASH1P34233 588 aa5.16□□□□□ -1.58
YBP1YBR216C HST3P53687 447 aa5.16□□□□□ -1.58
YBP1YBR216C TPD3P31383 635 aa5.15□□□□□ -1.58
YBP1YBR216C HXT10P43581 546 aa5.15□□□□□ -1.58
YBP1YBR216C TBF1Q02457 562 aa5.15□□□□□ -1.58
YBP1YBR216C PDC1P06169 563 aaKnown RBP5.14□□□□□ -1.59
YBP1YBR216C AFT1P22149 690 aa5.14□□□□□ -1.59
YBP1YBR216C RRD1P40454 393 aaKnown RBP5.14□□□□□ -1.59
YBP1YBR216C HST2P53686 357 aa5.14□□□□□ -1.59
YBP1YBR216C SCJ1P25303 377 aa5.13□□□□□ -1.59
YBP1YBR216C PUS6P53294 404 aa5.13□□□□□ -1.59
YBP1YBR216C YNR021WP53723 404 aaKnown RBP5.13□□□□□ -1.59
YBP1YBR216C YPL062WQ02781 134 aa5.13□□□□□ -1.59
YBP1YBR216C RGA2Q06407 1009 aa5.13□□□□□ -1.59
YBP1YBR216C MET22P32179 357 aa5.12□□□□□ -1.59
YBP1YBR216C RPA14P50106 137 aa5.12□□□□□ -1.59
YBP1YBR216C SYH1Q02875 849 aaKnown RBP5.12□□□□□ -1.59
YBP1YBR216C ALR1Q08269 859 aa5.12□□□□□ -1.59
YBP1YBR216C MMP1Q12372 583 aa5.12□□□□□ -1.59
YBP1YBR216C YDL206WQ12424 762 aa5.12□□□□□ -1.59
YBP1YBR216C GLC3P32775 704 aa5.11□□□□□ -1.59
YBP1YBR216C ENV9Q08651 330 aa5.11□□□□□ -1.59
YBP1YBR216C TRM1P15565 570 aaKnown RBP5.11□□□□□ -1.59
YBP1YBR216C GLN1P32288 370 aaKnown RBP5.11□□□□□ -1.59
YBP1YBR216C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
YBP1YBR216C YPR097WQ06839 1073 aa5.09□□□□□ -1.59
YBP1YBR216C KIP2P28743 706 aa5.09□□□□□ -1.6
YBP1YBR216C YDR444WQ04093 687 aa5.09□□□□□ -1.6
YBP1YBR216C RQC2Q12532 1038 aaKnown RBP5.09□□□□□ -1.6
YBP1YBR216C ESS1P22696 170 aa5.08□□□□□ -1.6
YBP1YBR216C YJR115WP47152 169 aa5.08□□□□□ -1.6
YBP1YBR216C IXR1P33417 597 aa5.06□□□□□ -1.6
YBP1YBR216C MSB3P48566 633 aaPredicted RBP5.06□□□□□ -1.6
YBP1YBR216C LCB5Q06147 687 aaKnown RBP5.06□□□□□ -1.6
YBP1YBR216C TYW1Q08960 810 aaKnown RBP5.06□□□□□ -1.6
YBP1YBR216C UGA3P26370 528 aa5.05□□□□□ -1.6
YBP1YBR216C YJU3P28321 313 aa5.05□□□□□ -1.6
YBP1YBR216C AIM7Q12156 149 aa5.05□□□□□ -1.6
YBP1YBR216C PKH3Q03306 898 aaPredicted RBP5.02□□□□□ -1.61
YBP1YBR216C SRF1Q12516 437 aa5.02□□□□□ -1.61
YBP1YBR216C MRT4P33201 236 aaKnown RBP5.02□□□□□ -1.61
YBP1YBR216C KTR1P27810 393 aaKnown RBP5.01□□□□□ -1.61
YBP1YBR216C PTK2P47116 818 aaKnown RBP5.01□□□□□ -1.61
YBP1YBR216C ARG8P18544 423 aa5□□□□□ -1.61
YBP1YBR216C RSC30P38781 883 aa5□□□□□ -1.61
YBP1YBR216C CSN12P47130 423 aa5□□□□□ -1.61
YBP1YBR216C VAC17P25591 423 aa4.99□□□□□ -1.61
YBP1YBR216C RTT106P40161 455 aa4.99□□□□□ -1.61
YBP1YBR216C YDL176WQ12027 708 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms