RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C TY1A-ER2P0CX66 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-GR3P0CX67 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-LR1P0CX68 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-MR2P0CX69 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-JR2P47099 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-DR1Q03856 440 aa9.68□□□□□ -0.86
RTG3YBL103C SAS4Q04003 481 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-ML1Q04706 440 aaKnown RBP9.68□□□□□ -0.86
RTG3YBL103C TY1A-BRQ12217 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-NL2Q12470 440 aa9.68□□□□□ -0.86
RTG3YBL103C TY1A-GR2Q12485 440 aa9.68□□□□□ -0.86
RTG3YBL103C KEX2P13134 814 aa9.67□□□□□ -0.86
RTG3YBL103C SEC2P17065 759 aa9.67□□□□□ -0.86
RTG3YBL103C ATF2P53296 535 aa9.66□□□□□ -0.86
RTG3YBL103C ERF2Q06551 359 aa9.66□□□□□ -0.86
RTG3YBL103C DPS1P04802 557 aaKnown RBP9.66□□□□□ -0.86
RTG3YBL103C LEU3P08638 886 aa9.65□□□□□ -0.87
RTG3YBL103C NIS1P53939 407 aa9.65□□□□□ -0.87
RTG3YBL103C SDH2P21801 266 aa9.63□□□□□ -0.87
RTG3YBL103C SIT4P20604 311 aa9.59□□□□□ -0.87
RTG3YBL103C FPK1P53739 893 aa9.58□□□□□ -0.88
RTG3YBL103C RAS1P01119 309 aa9.57□□□□□ -0.88
RTG3YBL103C RRN7P40992 514 aa9.57□□□□□ -0.88
RTG3YBL103C MRF1P30775 413 aaPredicted RBP9.56□□□□□ -0.88
RTG3YBL103C SPT16P32558 1035 aaKnown RBP9.56□□□□□ -0.88
RTG3YBL103C YNL115CP53925 644 aa9.56□□□□□ -0.88
RTG3YBL103C YMR196WQ04336 1088 aa9.55□□□□□ -0.88
RTG3YBL103C AIM7Q12156 149 aa9.55□□□□□ -0.88
RTG3YBL103C RTF1P53064 558 aa9.54□□□□□ -0.88
RTG3YBL103C AMS1P22855 1083 aa9.53□□□□□ -0.88
RTG3YBL103C ERG12P07277 443 aa9.51□□□□□ -0.89
RTG3YBL103C SCJ1P25303 377 aa9.51□□□□□ -0.89
RTG3YBL103C AGE1Q04412 482 aa9.51□□□□□ -0.89
RTG3YBL103C YEL077CQ3E7X8 1277 aa9.51□□□□□ -0.89
RTG3YBL103C PAT1P25644 796 aaKnown RBP9.5□□□□□ -0.89
RTG3YBL103C TUB4P53378 473 aa9.5□□□□□ -0.89
RTG3YBL103C SLY41P22215 453 aa9.49□□□□□ -0.89
RTG3YBL103C PAC1P39946 494 aaKnown RBP9.48□□□□□ -0.89
RTG3YBL103C RPN1P38764 993 aaKnown RBP9.47□□□□□ -0.89
RTG3YBL103C HST2P53686 357 aa9.47□□□□□ -0.89
RTG3YBL103C CST6P40535 587 aa9.46□□□□□ -0.9
RTG3YBL103C TYW1Q08960 810 aaKnown RBP9.46□□□□□ -0.9
RTG3YBL103C KIN1P13185 1064 aa9.45□□□□□ -0.9
RTG3YBL103C MMP1Q12372 583 aa9.45□□□□□ -0.9
RTG3YBL103C GLN1P32288 370 aaKnown RBP9.44□□□□□ -0.9
RTG3YBL103C ESS1P22696 170 aa9.41□□□□□ -0.9
RTG3YBL103C KTR1P27810 393 aaKnown RBP9.4□□□□□ -0.9
RTG3YBL103C FRK1Q03002 865 aaPredicted RBP9.4□□□□□ -0.9
RTG3YBL103C BDP1P46678 594 aa9.4□□□□□ -0.91
RTG3YBL103C SRC1Q03707 834 aa9.4□□□□□ -0.91
RTG3YBL103C LAM6Q08001 693 aa9.4□□□□□ -0.91
RTG3YBL103C CSN12P47130 423 aa9.39□□□□□ -0.91
RTG3YBL103C YJU3P28321 313 aa9.37□□□□□ -0.91
RTG3YBL103C PUS6P53294 404 aa9.37□□□□□ -0.91
RTG3YBL103C MOD5P07884 428 aa9.36□□□□□ -0.91
RTG3YBL103C TRM1P15565 570 aaKnown RBP9.36□□□□□ -0.91
RTG3YBL103C TBF1Q02457 562 aa9.35□□□□□ -0.91
RTG3YBL103C CLA4P48562 842 aa9.34□□□□□ -0.91
RTG3YBL103C YDL206WQ12424 762 aa9.34□□□□□ -0.91
RTG3YBL103C KXD1P53158 218 aa9.33□□□□□ -0.92
RTG3YBL103C PKH3Q03306 898 aaPredicted RBP9.33□□□□□ -0.92
RTG3YBL103C PDC1P06169 563 aaKnown RBP9.31□□□□□ -0.92
RTG3YBL103C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.31□□□□□ -0.92not detected
RTG3YBL103C GUA1P38625 525 aaKnown RBP9.29□□□□□ -0.92
RTG3YBL103C AIR1P40507 360 aaKnown RBP9.29□□□□□ -0.92
RTG3YBL103C PUS5Q06244 254 aa9.29□□□□□ -0.92
RTG3YBL103C HXT10P43581 546 aa9.28□□□□□ -0.92
RTG3YBL103C RPA14P50106 137 aa9.28□□□□□ -0.92
RTG3YBL103C TRK1P12685 1235 aa9.27□□□□□ -0.93
RTG3YBL103C ARG8P18544 423 aa9.27□□□□□ -0.93
RTG3YBL103C RSC30P38781 883 aa9.27□□□□□ -0.93
RTG3YBL103C ALR1Q08269 859 aa9.27□□□□□ -0.93
RTG3YBL103C YPR097WQ06839 1073 aa9.26□□□□□ -0.93
RTG3YBL103C SSA2P10592 639 aaKnown RBP9.25□□□□□ -0.93
RTG3YBL103C TPD3P31383 635 aa9.25□□□□□ -0.93
RTG3YBL103C RRD1P40454 393 aaKnown RBP9.24□□□□□ -0.93
RTG3YBL103C HED1Q03937 162 aa9.23□□□□□ -0.93
RTG3YBL103C RAD59Q12223 238 aa9.23□□□□□ -0.93
RTG3YBL103C CDC4P07834 779 aa9.17□□□□□ -0.94
RTG3YBL103C SYH1Q02875 849 aaKnown RBP9.15□□□□□ -0.95
RTG3YBL103C MET32Q12041 191 aa9.15□□□□□ -0.95
RTG3YBL103C LEO1P38439 464 aa9.14□□□□□ -0.95
RTG3YBL103C HPC2Q01448 625 aa9.14□□□□□ -0.95
RTG3YBL103C KIP2P28743 706 aa9.13□□□□□ -0.95
RTG3YBL103C TFB3Q03290 321 aa9.11□□□□□ -0.95
RTG3YBL103C IXR1P33417 597 aa9.1□□□□□ -0.95
RTG3YBL103C VAC17P25591 423 aa9.08□□□□□ -0.96
RTG3YBL103C ASH1P34233 588 aa9.08□□□□□ -0.96
RTG3YBL103C BRL1P38770 471 aa9.08□□□□□ -0.96
RTG3YBL103C PKC1P24583 1151 aa9.07□□□□□ -0.96
RTG3YBL103C BRE2P43132 505 aa9.07□□□□□ -0.96
RTG3YBL103C ITT1Q04638 464 aa9.06□□□□□ -0.96
RTG3YBL103C MAK16P10962 306 aaPredicted RBP9.05□□□□□ -0.96
RTG3YBL103C FIG4P42837 879 aa9.05□□□□□ -0.96
RTG3YBL103C HST3P53687 447 aa9.05□□□□□ -0.96
RTG3YBL103C AFT1P22149 690 aa9.04□□□□□ -0.96
RTG3YBL103C YBL036CP38197 257 aa9.02□□□□□ -0.96
RTG3YBL103C GCR2Q01722 534 aa9.02□□□□□ -0.96
RTG3YBL103C TEC1P18412 486 aa9□□□□□ -0.97
RTG3YBL103C CSE4P36012 229 aa9□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms