RNA–Protein interactions for RNA: YBL084C

CDC27, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeastyeast

Gene CDC27, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC27YBL084C TY1A-GR3P0CX67 440 aa4.31□□□□□ -1.72
CDC27YBL084C TY1A-LR1P0CX68 440 aa4.31□□□□□ -1.72
CDC27YBL084C TY1A-MR2P0CX69 440 aa4.31□□□□□ -1.72
CDC27YBL084C TY1A-JR2P47099 440 aa4.31□□□□□ -1.72
CDC27YBL084C TY1A-DR1Q03856 440 aa4.31□□□□□ -1.72
CDC27YBL084C TY1A-ML1Q04706 440 aaKnown RBP4.31□□□□□ -1.72
CDC27YBL084C TY1A-BRQ12217 440 aa4.31□□□□□ -1.72
CDC27YBL084C TY1A-NL2Q12470 440 aa4.31□□□□□ -1.72
CDC27YBL084C TY1A-GR2Q12485 440 aa4.31□□□□□ -1.72
CDC27YBL084C GCD11P32481 527 aaKnown RBP4.3□□□□□ -1.72
CDC27YBL084C ERG12P07277 443 aa4.3□□□□□ -1.72
CDC27YBL084C SAS10Q12136 610 aaPredicted RBP4.29□□□□□ -1.72
CDC27YBL084C PSE1P32337 1089 aaKnown RBP4.28□□□□□ -1.72
CDC27YBL084C SPT16P32558 1035 aaKnown RBP4.28□□□□□ -1.72
CDC27YBL084C DSF2P38213 736 aa4.26□□□□□ -1.73
CDC27YBL084C CST6P40535 587 aa4.26□□□□□ -1.73
CDC27YBL084C MAM3Q12296 706 aa4.26□□□□□ -1.73
CDC27YBL084C LAM6Q08001 693 aa4.25□□□□□ -1.73
CDC27YBL084C PAT1P25644 796 aaKnown RBP4.25□□□□□ -1.73
CDC27YBL084C RRN7P40992 514 aa4.25□□□□□ -1.73
CDC27YBL084C KEX2P13134 814 aa4.24□□□□□ -1.73
CDC27YBL084C CLB5P30283 435 aa4.24□□□□□ -1.73
CDC27YBL084C ERF2Q06551 359 aa4.24□□□□□ -1.73
CDC27YBL084C AIR1P40507 360 aaKnown RBP4.23□□□□□ -1.73
CDC27YBL084C BDP1P46678 594 aa4.23□□□□□ -1.73
CDC27YBL084C CLA4P48562 842 aa4.23□□□□□ -1.73
CDC27YBL084C IES2P40154 320 aa4.22□□□□□ -1.73
CDC27YBL084C NUP42P49686 430 aaKnown RBP4.22□□□□□ -1.73
CDC27YBL084C FRK1Q03002 865 aaPredicted RBP4.21□□□□□ -1.73
CDC27YBL084C RTF1P53064 558 aa4.2□□□□□ -1.74
CDC27YBL084C AGE1Q04412 482 aa4.2□□□□□ -1.74
CDC27YBL084C MOD5P07884 428 aa4.19□□□□□ -1.74
CDC27YBL084C SIT4P20604 311 aa4.19□□□□□ -1.74
CDC27YBL084C PAC1P39946 494 aaKnown RBP4.19□□□□□ -1.74
CDC27YBL084C HED1Q03937 162 aa4.19□□□□□ -1.74
CDC27YBL084C CDC4P07834 779 aa4.19□□□□□ -1.74
CDC27YBL084C BRE2P43132 505 aa4.19□□□□□ -1.74
CDC27YBL084C TEA1P47988 759 aa4.19□□□□□ -1.74
CDC27YBL084C TUB4P53378 473 aa4.19□□□□□ -1.74
CDC27YBL084C SPB4P25808 606 aaPredicted RBP4.18□□□□□ -1.74
CDC27YBL084C YNL115CP53925 644 aa4.18□□□□□ -1.74
CDC27YBL084C GCR2Q01722 534 aa4.18□□□□□ -1.74
CDC27YBL084C DIT2P21595 489 aa4.18□□□□□ -1.74
CDC27YBL084C NIS1P53939 407 aa4.16□□□□□ -1.74
CDC27YBL084C TPD3P31383 635 aa4.12□□□□□ -1.75
CDC27YBL084C FPK1P53739 893 aa4.12□□□□□ -1.75
CDC27YBL084C YPL062WQ02781 134 aa4.12□□□□□ -1.75
CDC27YBL084C PUS5Q06244 254 aa4.12□□□□□ -1.75
CDC27YBL084C MET32Q12041 191 aa4.12□□□□□ -1.75
CDC27YBL084C KXD1P53158 218 aa4.11□□□□□ -1.75
CDC27YBL084C AFT1P22149 690 aa4.11□□□□□ -1.75
CDC27YBL084C SLY41P22215 453 aa4.11□□□□□ -1.75
CDC27YBL084C HXT10P43581 546 aa4.11□□□□□ -1.75
CDC27YBL084C ASH1P34233 588 aa4.1□□□□□ -1.75
CDC27YBL084C MET22P32179 357 aa4.1□□□□□ -1.75
CDC27YBL084C PDC1P06169 563 aaKnown RBP4.09□□□□□ -1.75
CDC27YBL084C GAR1P28007 205 aaKnown RBP4.09□□□□□ -1.75
CDC27YBL084C RRD1P40454 393 aaKnown RBP4.09□□□□□ -1.75
CDC27YBL084C YMR196WQ04336 1088 aa4.09□□□□□ -1.75
CDC27YBL084C ENV9Q08651 330 aa4.09□□□□□ -1.75
CDC27YBL084C HST3P53687 447 aa4.09□□□□□ -1.76
CDC27YBL084C PUS6P53294 404 aa4.08□□□□□ -1.76
CDC27YBL084C HST2P53686 357 aa4.08□□□□□ -1.76
CDC27YBL084C RPA14P50106 137 aa4.07□□□□□ -1.76
CDC27YBL084C SYH1Q02875 849 aaKnown RBP4.07□□□□□ -1.76
CDC27YBL084C SCJ1P25303 377 aa4.06□□□□□ -1.76
CDC27YBL084C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
CDC27YBL084C ATF2P53296 535 aa4.06□□□□□ -1.76
CDC27YBL084C YDR444WQ04093 687 aa4.06□□□□□ -1.76
CDC27YBL084C YPR097WQ06839 1073 aa4.06□□□□□ -1.76
CDC27YBL084C ALR1Q08269 859 aa4.06□□□□□ -1.76
CDC27YBL084C GBP2P25555 427 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
CDC27YBL084C YNR021WP53723 404 aaKnown RBP4.06□□□□□ -1.76
CDC27YBL084C YDL206WQ12424 762 aa4.06□□□□□ -1.76
CDC27YBL084C MMP1Q12372 583 aa4.05□□□□□ -1.76
CDC27YBL084C TRM1P15565 570 aaKnown RBP4.05□□□□□ -1.76
CDC27YBL084C YJR115WP47152 169 aa4.05□□□□□ -1.76
CDC27YBL084C MSB3P48566 633 aaPredicted RBP4.05□□□□□ -1.76
CDC27YBL084C TBF1Q02457 562 aa4.05□□□□□ -1.76
CDC27YBL084C LCB5Q06147 687 aaKnown RBP4.05□□□□□ -1.76
CDC27YBL084C GLN1P32288 370 aaKnown RBP4.04□□□□□ -1.76
CDC27YBL084C LEO1P38439 464 aa4.04□□□□□ -1.76
CDC27YBL084C GLC3P32775 704 aa4.02□□□□□ -1.77
CDC27YBL084C KIP2P28743 706 aa4.02□□□□□ -1.77
CDC27YBL084C ESS1P22696 170 aa4.01□□□□□ -1.77
CDC27YBL084C MRT4P33201 236 aaKnown RBP4.01□□□□□ -1.77
CDC27YBL084C TAF7Q05021 590 aa4.01□□□□□ -1.77
CDC27YBL084C YDL176WQ12027 708 aa4.01□□□□□ -1.77
CDC27YBL084C LEU3P08638 886 aa4□□□□□ -1.77
CDC27YBL084C IXR1P33417 597 aa4□□□□□ -1.77
CDC27YBL084C RSC30P38781 883 aa4□□□□□ -1.77
CDC27YBL084C AIM7Q12156 149 aa4□□□□□ -1.77
CDC27YBL084C UGA3P26370 528 aa4□□□□□ -1.77
CDC27YBL084C YJU3P28321 313 aa4□□□□□ -1.77
CDC27YBL084C TYW1Q08960 810 aaKnown RBP4□□□□□ -1.77
CDC27YBL084C RTT106P40161 455 aa3.99□□□□□ -1.77
CDC27YBL084C VAC17P25591 423 aa3.98□□□□□ -1.77
CDC27YBL084C PTK2P47116 818 aaKnown RBP3.98□□□□□ -1.77
CDC27YBL084C KTR1P27810 393 aaKnown RBP3.98□□□□□ -1.77
CDC27YBL084C SRF1Q12516 437 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms