RNA–Protein interactions for RNA: YBL078C

ATG8, Transcript of Component of autophagosomes and Cvt vesicles, yeastyeast

Gene ATG8, Length 354 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG8YBL078C TY1A-DR4O74302 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-HP0C2I4 478 aaKnown RBP6.72□□□□□ -1.33
ATG8YBL078C TY1A-AP0CX57 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-PR1P0CX58 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-ORP0CX59 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-PR2P0CX60 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-DR5P0CX65 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-ER2P0CX66 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-GR3P0CX67 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-LR1P0CX68 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-MR2P0CX69 440 aa6.72□□□□□ -1.33
ATG8YBL078C KIN1P13185 1064 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-JR2P47099 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-DR1Q03856 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-ML1Q04706 440 aaKnown RBP6.72□□□□□ -1.33
ATG8YBL078C TY1A-BRQ12217 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-NL2Q12470 440 aa6.72□□□□□ -1.33
ATG8YBL078C TY1A-GR2Q12485 440 aa6.72□□□□□ -1.33
ATG8YBL078C RAS1P01119 309 aa6.71□□□□□ -1.34
ATG8YBL078C AMS1P22855 1083 aa6.71□□□□□ -1.34
ATG8YBL078C SEC2P17065 759 aa6.7□□□□□ -1.34
ATG8YBL078C TEA1P47988 759 aa6.7□□□□□ -1.34
ATG8YBL078C KEX2P13134 814 aa6.69□□□□□ -1.34
ATG8YBL078C YEL077CQ3E7X8 1277 aa6.69□□□□□ -1.34
ATG8YBL078C ERG12P07277 443 aa6.67□□□□□ -1.34
ATG8YBL078C SPT16P32558 1035 aaKnown RBP6.67□□□□□ -1.34
ATG8YBL078C ERF2Q06551 359 aa6.67□□□□□ -1.34
ATG8YBL078C PAT1P25644 796 aaKnown RBP6.65□□□□□ -1.34
ATG8YBL078C RRN7P40992 514 aa6.65□□□□□ -1.34
ATG8YBL078C RTF1P53064 558 aa6.65□□□□□ -1.34
ATG8YBL078C YNR021WP53723 404 aaKnown RBP6.65□□□□□ -1.34
ATG8YBL078C SIT4P20604 311 aa6.64□□□□□ -1.35
ATG8YBL078C GLC3P32775 704 aa6.64□□□□□ -1.35
ATG8YBL078C NIS1P53939 407 aa6.64□□□□□ -1.35
ATG8YBL078C SRC1Q03707 834 aa6.64□□□□□ -1.35
ATG8YBL078C ATF2P53296 535 aa6.63□□□□□ -1.35
ATG8YBL078C YNL115CP53925 644 aa6.63□□□□□ -1.35
ATG8YBL078C HGH1P48362 394 aaKnown RBP6.6□□□□□ -1.35
ATG8YBL078C YMR196WQ04336 1088 aa6.6□□□□□ -1.35
ATG8YBL078C CST6P40535 587 aa6.59□□□□□ -1.35
ATG8YBL078C FPK1P53739 893 aa6.59□□□□□ -1.35
ATG8YBL078C GUA1P38625 525 aaKnown RBP6.58□□□□□ -1.36
ATG8YBL078C TUB4P53378 473 aa6.58□□□□□ -1.36
ATG8YBL078C YML020WQ03722 664 aa6.58□□□□□ -1.36
ATG8YBL078C AGE1Q04412 482 aa6.58□□□□□ -1.36
ATG8YBL078C PAC1P39946 494 aaKnown RBP6.57□□□□□ -1.36
ATG8YBL078C LAM6Q08001 693 aa6.57□□□□□ -1.36
ATG8YBL078C FRK1Q03002 865 aaPredicted RBP6.56□□□□□ -1.36
ATG8YBL078C AIM7Q12156 149 aa6.56□□□□□ -1.36
ATG8YBL078C TRK1P12685 1235 aa6.55□□□□□ -1.36
ATG8YBL078C BDP1P46678 594 aa6.55□□□□□ -1.36
ATG8YBL078C SLY41P22215 453 aa6.54□□□□□ -1.36
ATG8YBL078C HST2P53686 357 aa6.54□□□□□ -1.36
ATG8YBL078C MOD5P07884 428 aa6.52□□□□□ -1.37
ATG8YBL078C SCJ1P25303 377 aa6.51□□□□□ -1.37
ATG8YBL078C MMP1Q12372 583 aa6.51□□□□□ -1.37
ATG8YBL078C AIM44Q99299 758 aa6.51□□□□□ -1.37
ATG8YBL078C GLN1P32288 370 aaKnown RBP6.5□□□□□ -1.37
ATG8YBL078C NOP8Q08287 484 aaPredicted RBP6.5□□□□□ -1.37
ATG8YBL078C CLA4P48562 842 aa6.49□□□□□ -1.37
ATG8YBL078C KXD1P53158 218 aa6.49□□□□□ -1.37
ATG8YBL078C PUS6P53294 404 aa6.49□□□□□ -1.37
ATG8YBL078C AIR1P40507 360 aaKnown RBP6.48□□□□□ -1.37
ATG8YBL078C TBF1Q02457 562 aa6.48□□□□□ -1.37
ATG8YBL078C SLX8P40072 274 aa6.47□□□□□ -1.37
ATG8YBL078C TFB3Q03290 321 aa6.47□□□□□ -1.37
ATG8YBL078C HED1Q03937 162 aa6.47□□□□□ -1.37
ATG8YBL078C TRM1P15565 570 aaKnown RBP6.46□□□□□ -1.38
ATG8YBL078C ESS1P22696 170 aa6.46□□□□□ -1.38
ATG8YBL078C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
ATG8YBL078C ORC1P54784 914 aaPredicted RBP6.46□□□□□ -1.38
ATG8YBL078C TYW1Q08960 810 aaKnown RBP6.46□□□□□ -1.38
ATG8YBL078C PDC1P06169 563 aaKnown RBP6.45□□□□□ -1.38
ATG8YBL078C CDC4P07834 779 aa6.45□□□□□ -1.38
ATG8YBL078C SSA1P10591 642 aaKnown RBP6.45□□□□□ -1.38
ATG8YBL078C TPD3P31383 635 aa6.45□□□□□ -1.38
ATG8YBL078C GEF1P37020 779 aa6.45□□□□□ -1.38
ATG8YBL078C HXT10P43581 546 aa6.45□□□□□ -1.38
ATG8YBL078C RPA14P50106 137 aa6.45□□□□□ -1.38
ATG8YBL078C HPC2Q01448 625 aa6.45□□□□□ -1.38
ATG8YBL078C RRD1P40454 393 aaKnown RBP6.44□□□□□ -1.38
ATG8YBL078C PUS5Q06244 254 aa6.44□□□□□ -1.38
ATG8YBL078C SUB2Q07478 446 aaKnown RBP6.44□□□□□ -1.38
ATG8YBL078C ALR1Q08269 859 aa6.44□□□□□ -1.38
ATG8YBL078C YDL206WQ12424 762 aa6.44□□□□□ -1.38
ATG8YBL078C KTR1P27810 393 aaKnown RBP6.43□□□□□ -1.38
ATG8YBL078C CSN12P47130 423 aa6.43□□□□□ -1.38
ATG8YBL078C YPR097WQ06839 1073 aa6.43□□□□□ -1.38
ATG8YBL078C YJU3P28321 313 aa6.42□□□□□ -1.38
ATG8YBL078C PKC1P24583 1151 aa6.41□□□□□ -1.38
ATG8YBL078C PKH3Q03306 898 aaPredicted RBP6.41□□□□□ -1.38
ATG8YBL078C BRE2P43132 505 aa6.4□□□□□ -1.38
ATG8YBL078C NAP1P25293 417 aaKnown RBP6.39□□□□□ -1.39
ATG8YBL078C IOC4Q04213 475 aa6.39□□□□□ -1.39
ATG8YBL078C SGS1P35187 1447 aa6.39□□□□□ -1.39
ATG8YBL078C BRL1P38770 471 aa6.38□□□□□ -1.39
ATG8YBL078C RSC30P38781 883 aa6.38□□□□□ -1.39
ATG8YBL078C GCR2Q01722 534 aa6.38□□□□□ -1.39
ATG8YBL078C SYH1Q02875 849 aaKnown RBP6.38□□□□□ -1.39
ATG8YBL078C MET32Q12041 191 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms