RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W PTC4P38089 393 aa5.01□□□□□ -1.61
NUP60YAR002W JIP4Q03361 876 aa5.01□□□□□ -1.61
NUP60YAR002W SPP41P38904 1435 aa5□□□□□ -1.61
NUP60YAR002W XDJ1P39102 459 aa5□□□□□ -1.61
NUP60YAR002W YNR021WP53723 404 aaKnown RBP5□□□□□ -1.61
NUP60YAR002W STH1P32597 1359 aa4.99□□□□□ -1.61
NUP60YAR002W PCS60P38137 543 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
NUP60YAR002W DAN4P47179 1161 aa4.98□□□□□ -1.61
NUP60YAR002W NUP42P49686 430 aaKnown RBP4.98□□□□□ -1.61
NUP60YAR002W TAF7Q05021 590 aa4.98□□□□□ -1.61
NUP60YAR002W CDC25P04821 1589 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-HO13535 1793 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-DR5P0C2I2 1755 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-DR6P0C2I3 1755 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-LR2P0C2I5 1755 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-LR3P0C2I6 1755 aaKnown RBP4.98□□□□□ -1.61
NUP60YAR002W TY1B-PR1P0C2I9 1755 aaKnown RBP4.98□□□□□ -1.61
NUP60YAR002W TY1B-PR2P0C2J0 1756 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-PR3P0C2J1 1755 aaKnown RBP4.98□□□□□ -1.61
NUP60YAR002W TY1B-JR1P47098 1755 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-ML2Q03434 1755 aaKnown RBP4.98□□□□□ -1.61
NUP60YAR002W TY1B-ER1Q03612 1755 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-ML1Q04711 1755 aaKnown RBP4.98□□□□□ -1.61
NUP60YAR002W TY1B-BRQ12193 1756 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-GR2Q12269 1755 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-OLQ12273 1755 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-GR3Q12316 1755 aa4.98□□□□□ -1.61
NUP60YAR002W TY1B-PLQ12414 1755 aaKnown RBP4.98□□□□□ -1.61
NUP60YAR002W TY1B-ORQ92393 1755 aa4.98□□□□□ -1.61
NUP60YAR002W VRP1P37370 817 aa4.97□□□□□ -1.61
NUP60YAR002W DIT2P21595 489 aa4.97□□□□□ -1.61
NUP60YAR002W TSC11P40061 1430 aa4.96□□□□□ -1.61
NUP60YAR002W TRM732Q03496 1420 aa4.96□□□□□ -1.61
NUP60YAR002W VTH1P40438 1549 aa4.96□□□□□ -1.62
NUP60YAR002W VTH2P40890 1549 aa4.96□□□□□ -1.62
NUP60YAR002W ILV3P39522 585 aaKnown RBP4.96□□□□□ -1.62
NUP60YAR002W PAN1P32521 1480 aa4.96□□□□□ -1.62
NUP60YAR002W PDR15Q04182 1529 aaKnown RBP4.95□□□□□ -1.62
NUP60YAR002W MLP2P40457 1679 aa4.95□□□□□ -1.62
NUP60YAR002W DPS1P04802 557 aaKnown RBP4.95□□□□□ -1.62
NUP60YAR002W RPP1BP10622 106 aaKnown RBP4.94□□□□□ -1.62
NUP60YAR002W AIM7Q12156 149 aa4.94□□□□□ -1.62
NUP60YAR002W GLC3P32775 704 aa4.94□□□□□ -1.62
NUP60YAR002W SLI15P38283 698 aa4.94□□□□□ -1.62
NUP60YAR002W ULS1Q08562 1619 aa4.93□□□□□ -1.62
NUP60YAR002W IKI3Q06706 1349 aaKnown RBP4.93□□□□□ -1.62
NUP60YAR002W PSE1P32337 1089 aaKnown RBP4.93□□□□□ -1.62
NUP60YAR002W ATF2P53296 535 aa4.93□□□□□ -1.62
NUP60YAR002W GEA1P47102 1408 aaPredicted RBP4.92□□□□□ -1.62
NUP60YAR002W SNT2P53127 1403 aa4.91□□□□□ -1.62
NUP60YAR002W KIN1P13185 1064 aa4.91□□□□□ -1.62
NUP60YAR002W ORC6P38826 435 aa4.91□□□□□ -1.62
NUP60YAR002W NUP170P38181 1502 aa4.9□□□□□ -1.62
NUP60YAR002W ESC1Q03661 1658 aaKnown RBP4.9□□□□□ -1.63
NUP60YAR002W RGA1P39083 1007 aa4.9□□□□□ -1.63
NUP60YAR002W PML39Q03760 334 aa4.9□□□□□ -1.63
NUP60YAR002W TY1B-JR2P47100 1755 aaKnown RBP4.89□□□□□ -1.63
NUP60YAR002W TY1B-ER2Q03619 1755 aa4.89□□□□□ -1.63
NUP60YAR002W TY1B-MR1Q04214 1755 aa4.89□□□□□ -1.63
NUP60YAR002W TY1B-MR2Q04670 1755 aaKnown RBP4.89□□□□□ -1.63
NUP60YAR002W TY1B-LR1Q12088 1755 aaKnown RBP4.89□□□□□ -1.63
NUP60YAR002W TY1B-NL1Q12112 1755 aa4.89□□□□□ -1.63
NUP60YAR002W TY1B-GR1Q12141 1755 aa4.89□□□□□ -1.63
NUP60YAR002W TY1B-BLQ12490 1755 aa4.89□□□□□ -1.63
NUP60YAR002W DNF1P32660 1571 aa4.89□□□□□ -1.63
NUP60YAR002W CSC1Q06538 782 aa4.89□□□□□ -1.63
NUP60YAR002W ELP4Q02884 456 aaKnown RBP4.88□□□□□ -1.63
NUP60YAR002W RPA190P10964 1664 aaKnown RBP4.88□□□□□ -1.63
NUP60YAR002W TY3B-GQ99315 1547 aa4.87□□□□□ -1.63
NUP60YAR002W MID1P41821 548 aa4.87□□□□□ -1.63
NUP60YAR002W NTE1Q04958 1679 aa4.87□□□□□ -1.63
NUP60YAR002W GAP1P19145 602 aaPredicted RBP4.86□□□□□ -1.63
NUP60YAR002W DPL1Q05567 589 aa4.86□□□□□ -1.63
NUP60YAR002W CDC73Q06697 393 aa4.86□□□□□ -1.63
NUP60YAR002W GEA2P39993 1459 aaKnown RBP4.86□□□□□ -1.63
NUP60YAR002W RGR1P19263 1082 aa4.86□□□□□ -1.63
NUP60YAR002W CLB5P30283 435 aa4.86□□□□□ -1.63
NUP60YAR002W MVP1P40959 511 aaKnown RBP4.86□□□□□ -1.63
NUP60YAR002W PEX21P50091 288 aa4.86□□□□□ -1.63
NUP60YAR002W PEX29Q03370 554 aa4.86□□□□□ -1.63
NUP60YAR002W TFB4Q12004 338 aa4.86□□□□□ -1.63
NUP60YAR002W SSM4P40318 1319 aa4.85□□□□□ -1.63
NUP60YAR002W TEA1P47988 759 aa4.85□□□□□ -1.63
NUP60YAR002W MPC54Q08550 464 aa4.85□□□□□ -1.63
NUP60YAR002W RPO21P04050 1733 aaKnown RBP4.85□□□□□ -1.63
NUP60YAR002W IRC20Q06554 1556 aa4.85□□□□□ -1.63
NUP60YAR002W RTT106P40161 455 aa4.84□□□□□ -1.63
NUP60YAR002W NUP159P40477 1460 aa4.84□□□□□ -1.64
NUP60YAR002W CAT8P39113 1433 aa4.83□□□□□ -1.64
NUP60YAR002W DMA2P53924 522 aa4.83□□□□□ -1.64
NUP60YAR002W YPR109WQ06104 294 aa4.83□□□□□ -1.64
NUP60YAR002W ISU2Q12056 156 aa4.83□□□□□ -1.64
NUP60YAR002W VPS15P22219 1454 aa4.82□□□□□ -1.64
NUP60YAR002W YBT1P32386 1661 aa4.82□□□□□ -1.64
NUP60YAR002W HGH1P48362 394 aaKnown RBP4.82□□□□□ -1.64
NUP60YAR002W YDR344CQ05510 147 aa4.82□□□□□ -1.64
NUP60YAR002W NMA111P53920 997 aa4.81□□□□□ -1.64
NUP60YAR002W GUA1P38625 525 aaKnown RBP4.8□□□□□ -1.64
NUP60YAR002W TUM1Q08686 304 aaKnown RBP4.8□□□□□ -1.64
NUP60YAR002W PDR12Q02785 1511 aa4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms