RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeastyeast

Gene ECM1, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM1YAL059W BUD20Q08004 166 aaPredicted RBP8.25□□□□□ -1.09
ECM1YAL059W HST2P53686 357 aa8.24□□□□□ -1.09
ECM1YAL059W ERF2Q06551 359 aa8.24□□□□□ -1.09
ECM1YAL059W TY1A-DR4O74302 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-HP0C2I4 478 aaKnown RBP8.23□□□□□ -1.09
ECM1YAL059W TY1A-AP0CX57 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-PR1P0CX58 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-ORP0CX59 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-PR2P0CX60 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-DR5P0CX65 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-ER2P0CX66 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-GR3P0CX67 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-LR1P0CX68 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-MR2P0CX69 440 aa8.23□□□□□ -1.09
ECM1YAL059W GUA1P38625 525 aaKnown RBP8.23□□□□□ -1.09
ECM1YAL059W TY1A-JR2P47099 440 aa8.23□□□□□ -1.09
ECM1YAL059W RTF1P53064 558 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-DR1Q03856 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-ML1Q04706 440 aaKnown RBP8.23□□□□□ -1.09
ECM1YAL059W TY1A-BRQ12217 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-NL2Q12470 440 aa8.23□□□□□ -1.09
ECM1YAL059W TY1A-GR2Q12485 440 aa8.23□□□□□ -1.09
ECM1YAL059W CSN12P47130 423 aa8.22□□□□□ -1.09
ECM1YAL059W TYW1Q08960 810 aaKnown RBP8.22□□□□□ -1.09
ECM1YAL059W KTR1P27810 393 aaKnown RBP8.21□□□□□ -1.1
ECM1YAL059W GCD11P32481 527 aaKnown RBP8.21□□□□□ -1.1
ECM1YAL059W YNL115CP53925 644 aa8.21□□□□□ -1.1
ECM1YAL059W PRT1P06103 763 aaKnown RBP8.2□□□□□ -1.1
ECM1YAL059W SCJ1P25303 377 aa8.2□□□□□ -1.1
ECM1YAL059W GLN1P32288 370 aaKnown RBP8.2□□□□□ -1.1
ECM1YAL059W SEC2P17065 759 aa8.19□□□□□ -1.1
ECM1YAL059W MMP1Q12372 583 aa8.19□□□□□ -1.1
ECM1YAL059W GYP1Q08484 637 aa8.18□□□□□ -1.1
ECM1YAL059W SSA2P10592 639 aaKnown RBP8.17□□□□□ -1.1
ECM1YAL059W SLY41P22215 453 aa8.17□□□□□ -1.1
ECM1YAL059W ESS1P22696 170 aa8.17□□□□□ -1.1
ECM1YAL059W HPC2Q01448 625 aa8.14□□□□□ -1.11
ECM1YAL059W PKH3Q03306 898 aaPredicted RBP8.14□□□□□ -1.11
ECM1YAL059W SAS4Q04003 481 aa8.14□□□□□ -1.11
ECM1YAL059W RRN7P40992 514 aa8.13□□□□□ -1.11
ECM1YAL059W AGE1Q04412 482 aa8.13□□□□□ -1.11
ECM1YAL059W YJU3P28321 313 aa8.12□□□□□ -1.11
ECM1YAL059W XDJ1P39102 459 aa8.12□□□□□ -1.11
ECM1YAL059W TUB4P53378 473 aa8.11□□□□□ -1.11
ECM1YAL059W TRM1P15565 570 aaKnown RBP8.1□□□□□ -1.11
ECM1YAL059W SPT16P32558 1035 aaKnown RBP8.09□□□□□ -1.11
ECM1YAL059W PAC1P39946 494 aaKnown RBP8.09□□□□□ -1.11
ECM1YAL059W TFB3Q03290 321 aa8.09□□□□□ -1.11
ECM1YAL059W DMA2P53924 522 aa8.08□□□□□ -1.12
ECM1YAL059W RAD59Q12223 238 aa8.08□□□□□ -1.12
ECM1YAL059W SDH2P21801 266 aa8.07□□□□□ -1.12
ECM1YAL059W PAT1P25644 796 aaKnown RBP8.07□□□□□ -1.12
ECM1YAL059W BRL1P38770 471 aa8.07□□□□□ -1.12
ECM1YAL059W PUS6P53294 404 aa8.07□□□□□ -1.12
ECM1YAL059W TBF1Q02457 562 aa8.07□□□□□ -1.12
ECM1YAL059W LAM6Q08001 693 aa8.07□□□□□ -1.12
ECM1YAL059W ARG8P18544 423 aa8.05□□□□□ -1.12
ECM1YAL059W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
ECM1YAL059W RSC30P38781 883 aa8.04□□□□□ -1.12
ECM1YAL059W MRF1P30775 413 aaPredicted RBP8.03□□□□□ -1.12
ECM1YAL059W YDL206WQ12424 762 aa8.03□□□□□ -1.12
ECM1YAL059W PKC1P24583 1151 aa8.02□□□□□ -1.13
ECM1YAL059W HGH1P48362 394 aaKnown RBP8.01□□□□□ -1.13
ECM1YAL059W ERG12P07277 443 aa8□□□□□ -1.13
ECM1YAL059W RPA14P50106 137 aa7.99□□□□□ -1.13
ECM1YAL059W PDC1P06169 563 aaKnown RBP7.98□□□□□ -1.13
ECM1YAL059W KXD1P53158 218 aa7.98□□□□□ -1.13
ECM1YAL059W YEL077CQ3E7X8 1277 aa7.98□□□□□ -1.13
ECM1YAL059W ALR1Q08269 859 aa7.97□□□□□ -1.13
ECM1YAL059W MOD5P07884 428 aa7.96□□□□□ -1.14
ECM1YAL059W YBL036CP38197 257 aa7.96□□□□□ -1.14
ECM1YAL059W CST6P40535 587 aa7.96□□□□□ -1.14
ECM1YAL059W YPR097WQ06839 1073 aa7.96□□□□□ -1.14
ECM1YAL059W AMS1P22855 1083 aa7.95□□□□□ -1.14
ECM1YAL059W RRD1P40454 393 aaKnown RBP7.94□□□□□ -1.14
ECM1YAL059W HXT10P43581 546 aa7.94□□□□□ -1.14
ECM1YAL059W BDP1P46678 594 aa7.94□□□□□ -1.14
ECM1YAL059W MAK16P10962 306 aaPredicted RBP7.93□□□□□ -1.14
ECM1YAL059W FRK1Q03002 865 aaPredicted RBP7.93□□□□□ -1.14
ECM1YAL059W RAS1P01119 309 aa7.92□□□□□ -1.14
ECM1YAL059W DPS1P04802 557 aaKnown RBP7.92□□□□□ -1.14
ECM1YAL059W TPD3P31383 635 aa7.92□□□□□ -1.14
ECM1YAL059W BIO2P32451 375 aa7.92□□□□□ -1.14
ECM1YAL059W CSE4P36012 229 aa7.91□□□□□ -1.14
ECM1YAL059W YJL007CP47080 104 aa7.89□□□□□ -1.15
ECM1YAL059W PUS5Q06244 254 aa7.87□□□□□ -1.15
ECM1YAL059W SPT5P27692 1063 aaKnown RBP7.86□□□□□ -1.15
ECM1YAL059W BIM1P40013 344 aa7.85□□□□□ -1.15
ECM1YAL059W NAF1P53919 492 aaKnown RBP7.85□□□□□ -1.15
ECM1YAL059W ATG32P40458 529 aa7.84□□□□□ -1.15
ECM1YAL059W FIG4P42837 879 aa7.83□□□□□ -1.16
ECM1YAL059W YNL108CP53929 270 aa7.83□□□□□ -1.16
ECM1YAL059W TEC1P18412 486 aa7.82□□□□□ -1.16
ECM1YAL059W YDJ1P25491 409 aaKnown RBP7.82□□□□□ -1.16
ECM1YAL059W VAC17P25591 423 aa7.82□□□□□ -1.16
ECM1YAL059W CLA4P48562 842 aa7.81□□□□□ -1.16
ECM1YAL059W MCM16Q12262 181 aa7.8□□□□□ -1.16
ECM1YAL059W SUP45P12385 437 aaKnown RBP7.79□□□□□ -1.16
ECM1YAL059W KIP2P28743 706 aa7.79□□□□□ -1.16
ECM1YAL059W RPL34BP40525 121 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms