RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C GCD11P32481 527 aaKnown RBP5.2□□□□□ -1.58
SPC72YAL047C GLC3P32775 704 aa5.2□□□□□ -1.58
SPC72YAL047C YEL077CQ3E7X8 1277 aa5.2□□□□□ -1.58
SPC72YAL047C PRT1P06103 763 aaKnown RBP5.2□□□□□ -1.58
SPC72YAL047C BUD20Q08004 166 aaPredicted RBP5.2□□□□□ -1.58
SPC72YAL047C MRF1P30775 413 aaPredicted RBP5.18□□□□□ -1.58
SPC72YAL047C YMR196WQ04336 1088 aa5.17□□□□□ -1.58
SPC72YAL047C KEX2P13134 814 aa5.16□□□□□ -1.58
SPC72YAL047C SPT16P32558 1035 aaKnown RBP5.15□□□□□ -1.58
SPC72YAL047C PAT1P25644 796 aaKnown RBP5.15□□□□□ -1.59
SPC72YAL047C NIS1P53939 407 aa5.14□□□□□ -1.59
SPC72YAL047C AIM7Q12156 149 aa5.14□□□□□ -1.59
SPC72YAL047C TY1A-DR4O74302 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-HP0C2I4 478 aaKnown RBP5.13□□□□□ -1.59
SPC72YAL047C TY1A-AP0CX57 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-PR1P0CX58 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-ORP0CX59 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-PR2P0CX60 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-DR5P0CX65 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-ER2P0CX66 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-GR3P0CX67 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-LR1P0CX68 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-MR2P0CX69 440 aa5.13□□□□□ -1.59
SPC72YAL047C RRN7P40992 514 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-JR2P47099 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-DR1Q03856 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-ML1Q04706 440 aaKnown RBP5.13□□□□□ -1.59
SPC72YAL047C TY1A-BRQ12217 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-NL2Q12470 440 aa5.13□□□□□ -1.59
SPC72YAL047C TY1A-GR2Q12485 440 aa5.13□□□□□ -1.59
SPC72YAL047C ERG12P07277 443 aa5.13□□□□□ -1.59
SPC72YAL047C RPN1P38764 993 aaKnown RBP5.13□□□□□ -1.59
SPC72YAL047C RTF1P53064 558 aa5.13□□□□□ -1.59
SPC72YAL047C YNL115CP53925 644 aa5.12□□□□□ -1.59
SPC72YAL047C ERF2Q06551 359 aa5.12□□□□□ -1.59
SPC72YAL047C SEC2P17065 759 aa5.11□□□□□ -1.59
SPC72YAL047C FPK1P53739 893 aa5.11□□□□□ -1.59
SPC72YAL047C SIT4P20604 311 aa5.1□□□□□ -1.59
SPC72YAL047C SLY41P22215 453 aa5.09□□□□□ -1.59
SPC72YAL047C YPL062WQ02781 134 aa5.09□□□□□ -1.59
SPC72YAL047C KIN1P13185 1064 aa5.08□□□□□ -1.6
SPC72YAL047C GLN1P32288 370 aaKnown RBP5.08□□□□□ -1.6
SPC72YAL047C MMP1Q12372 583 aa5.08□□□□□ -1.6
SPC72YAL047C TUB4P53378 473 aa5.07□□□□□ -1.6
SPC72YAL047C HST2P53686 357 aa5.07□□□□□ -1.6
SPC72YAL047C BRE2P43132 505 aa5.07□□□□□ -1.6
SPC72YAL047C TBF1Q02457 562 aa5.07□□□□□ -1.6
SPC72YAL047C GCR2Q01722 534 aa5.06□□□□□ -1.6
SPC72YAL047C SCJ1P25303 377 aa5.05□□□□□ -1.6
SPC72YAL047C PAC1P39946 494 aaKnown RBP5.05□□□□□ -1.6
SPC72YAL047C AIR1P40507 360 aaKnown RBP5.05□□□□□ -1.6
SPC72YAL047C FRK1Q03002 865 aaPredicted RBP5.05□□□□□ -1.6
SPC72YAL047C CSN12P47130 423 aa5.05□□□□□ -1.6
SPC72YAL047C TYW1Q08960 810 aaKnown RBP5.05□□□□□ -1.6
SPC72YAL047C ESS1P22696 170 aa5.04□□□□□ -1.6
SPC72YAL047C CST6P40535 587 aa5.04□□□□□ -1.6
SPC72YAL047C AGE1Q04412 482 aa5.04□□□□□ -1.6
SPC72YAL047C GAR1P28007 205 aaKnown RBP5.03□□□□□ -1.6
SPC72YAL047C KXD1P53158 218 aa5.03□□□□□ -1.6
SPC72YAL047C PUS6P53294 404 aa5.03□□□□□ -1.6
SPC72YAL047C CLA4P48562 842 aa5.03□□□□□ -1.6
SPC72YAL047C SSA2P10592 639 aaKnown RBP5.02□□□□□ -1.61
SPC72YAL047C TRM1P15565 570 aaKnown RBP5.02□□□□□ -1.61
SPC72YAL047C GBP2P25555 427 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
SPC72YAL047C PKH3Q03306 898 aaPredicted RBP5.02□□□□□ -1.61
SPC72YAL047C BDP1P46678 594 aa5.01□□□□□ -1.61
SPC72YAL047C LAM6Q08001 693 aa5.01□□□□□ -1.61
SPC72YAL047C YDL206WQ12424 762 aa5□□□□□ -1.61
SPC72YAL047C YJU3P28321 313 aa5□□□□□ -1.61
SPC72YAL047C ALR1Q08269 859 aa5□□□□□ -1.61
SPC72YAL047C ARG8P18544 423 aa4.99□□□□□ -1.61
SPC72YAL047C KTR1P27810 393 aaKnown RBP4.99□□□□□ -1.61
SPC72YAL047C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
SPC72YAL047C RPA14P50106 137 aa4.98□□□□□ -1.61
SPC72YAL047C PDC1P06169 563 aaKnown RBP4.97□□□□□ -1.61
SPC72YAL047C CDC4P07834 779 aa4.97□□□□□ -1.61
SPC72YAL047C HXT10P43581 546 aa4.97□□□□□ -1.61
SPC72YAL047C MOD5P07884 428 aa4.96□□□□□ -1.61
SPC72YAL047C GUA1P38625 525 aaKnown RBP4.96□□□□□ -1.61
SPC72YAL047C LEO1P38439 464 aa4.96□□□□□ -1.62
SPC72YAL047C RRD1P40454 393 aaKnown RBP4.96□□□□□ -1.62
SPC72YAL047C PUS5Q06244 254 aa4.96□□□□□ -1.62
SPC72YAL047C YPR097WQ06839 1073 aa4.95□□□□□ -1.62
SPC72YAL047C RAD59Q12223 238 aa4.95□□□□□ -1.62
SPC72YAL047C TPD3P31383 635 aa4.94□□□□□ -1.62
SPC72YAL047C BRL1P38770 471 aa4.94□□□□□ -1.62
SPC72YAL047C HED1Q03937 162 aa4.94□□□□□ -1.62
SPC72YAL047C KIP2P28743 706 aa4.93□□□□□ -1.62
SPC72YAL047C MET22P32179 357 aa4.92□□□□□ -1.62
SPC72YAL047C HPC2Q01448 625 aa4.92□□□□□ -1.62
SPC72YAL047C SYH1Q02875 849 aaKnown RBP4.92□□□□□ -1.62
SPC72YAL047C RSC30P38781 883 aa4.92□□□□□ -1.62
SPC72YAL047C ENV9Q08651 330 aa4.91□□□□□ -1.62
SPC72YAL047C IXR1P33417 597 aa4.9□□□□□ -1.62
SPC72YAL047C HGH1P48362 394 aaKnown RBP4.9□□□□□ -1.62
SPC72YAL047C TFB3Q03290 321 aa4.89□□□□□ -1.63
SPC72YAL047C HST3P53687 447 aa4.88□□□□□ -1.63
SPC72YAL047C YDR444WQ04093 687 aa4.88□□□□□ -1.63
SPC72YAL047C YBL036CP38197 257 aa4.88□□□□□ -1.63
SPC72YAL047C MAK16P10962 306 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms