RNA–Protein interactions for RNA: YAL035W

FUN12, Transcript of Translation initiation factor eIF5B, yeast

Gene FUN12, Length 3,009 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FUN12	YAL035W	CWC22	P53333	577 aa	Known RBP	4.7	□□□□□ -1.66
FUN12	YAL035W	PMC1	P38929	1173 aa	Predicted RBP	4.7	□□□□□ -1.66
FUN12	YAL035W	ZDS1	P50111	915 aa	Known RBP	4.7	□□□□□ -1.66
FUN12	YAL035W	YLR326W	Q06170	240 aa	Known RBP	4.7	□□□□□ -1.66
FUN12	YAL035W	STB3	Q12427	513 aa		4.7	□□□□□ -1.66
FUN12	YAL035W	PSE1	P32337	1089 aa	Known RBP	4.7	□□□□□ -1.66
FUN12	YAL035W	TOM20	P35180	183 aa		4.7	□□□□□ -1.66
FUN12	YAL035W	YJL007C	P47080	104 aa		4.7	□□□□□ -1.66
FUN12	YAL035W	TEA1	P47988	759 aa		4.7	□□□□□ -1.66
FUN12	YAL035W	YDR090C	Q03193	310 aa		4.69	□□□□□ -1.66
FUN12	YAL035W	TRL1	P09880	827 aa	Known RBP	4.69	□□□□□ -1.66
FUN12	YAL035W	BIO2	P32451	375 aa		4.68	□□□□□ -1.66
FUN12	YAL035W	HTA1	P04911	132 aa	Known RBP	4.68	□□□□□ -1.66
FUN12	YAL035W	HTA2	P04912	132 aa		4.68	□□□□□ -1.66
FUN12	YAL035W	SET4	P42948	560 aa		4.68	□□□□□ -1.66
FUN12	YAL035W	RLP24	Q07915	199 aa	Known RBP	4.68	□□□□□ -1.66
FUN12	YAL035W	HAT1	Q12341	374 aa		4.68	□□□□□ -1.66
FUN12	YAL035W	CLB5	P30283	435 aa		4.67	□□□□□ -1.66
FUN12	YAL035W	PEX21	P50091	288 aa		4.67	□□□□□ -1.66
FUN12	YAL035W	RNH70	P53331	553 aa		4.67	□□□□□ -1.66
FUN12	YAL035W	BRE1	Q07457	700 aa	Known RBP	4.67	□□□□□ -1.66
FUN12	YAL035W	MAK16	P10962	306 aa	Predicted RBP	4.67	□□□□□ -1.66
FUN12	YAL035W	TOA1	P32773	286 aa		4.67	□□□□□ -1.66
FUN12	YAL035W	NNF1	P47149	201 aa		4.67	□□□□□ -1.66
FUN12	YAL035W	SVL3	Q03088	825 aa	Known RBP	4.67	□□□□□ -1.66
FUN12	YAL035W	YBL036C	P38197	257 aa		4.67	□□□□□ -1.66
FUN12	YAL035W	BUD6	P41697	788 aa		4.67	□□□□□ -1.66
FUN12	YAL035W	SAM3	Q08986	587 aa		4.67	□□□□□ -1.66
FUN12	YAL035W	IOC3	P43596	787 aa		4.66	□□□□□ -1.66
FUN12	YAL035W	SVF1	Q05515	481 aa		4.66	□□□□□ -1.66
FUN12	YAL035W	MSC6	Q08818	692 aa	Known RBP	4.66	□□□□□ -1.66
FUN12	YAL035W	WHI5	Q12416	295 aa		4.66	□□□□□ -1.66
FUN12	YAL035W	SUP45	P12385	437 aa	Known RBP	4.66	□□□□□ -1.66
FUN12	YAL035W	GRX4	P32642	244 aa		4.66	□□□□□ -1.66
FUN12	YAL035W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	not detected
FUN12	YAL035W	CIT2	P08679	460 aa		4.65	□□□□□ -1.67
FUN12	YAL035W	RPS0B	P46654	252 aa	Known RBP	4.65	□□□□□ -1.67
FUN12	YAL035W	ITT1	Q04638	464 aa		4.65	□□□□□ -1.67
FUN12	YAL035W	MRX10	Q05648	414 aa		4.65	□□□□□ -1.67
FUN12	YAL035W	YOL036W	Q08206	761 aa		4.65	□□□□□ -1.67
FUN12	YAL035W	WSC3	Q12215	556 aa		4.65	□□□□□ -1.67
FUN12	YAL035W	YOL098C	Q12496	1037 aa		4.65	□□□□□ -1.67
FUN12	YAL035W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
FUN12	YAL035W	RPL34A	P87262	121 aa	Predicted RBP	4.64	□□□□□ -1.67
FUN12	YAL035W	MNN4	P36044	1178 aa		4.63	□□□□□ -1.67
FUN12	YAL035W	TPM2	P40414	161 aa		4.63	□□□□□ -1.67
FUN12	YAL035W	TAT2	P38967	592 aa		4.62	□□□□□ -1.67
FUN12	YAL035W	STM1	P39015	273 aa	Known RBP	4.62	□□□□□ -1.67
FUN12	YAL035W	YJR107W	P47145	328 aa		4.62	□□□□□ -1.67
FUN12	YAL035W	RTG2	P32608	588 aa	Known RBP	4.62	□□□□□ -1.67
FUN12	YAL035W	VMA4	P22203	233 aa	Known RBP	4.62	□□□□□ -1.67
FUN12	YAL035W	BOI2	P39969	1040 aa		4.62	□□□□□ -1.67
FUN12	YAL035W	MDJ2	P42834	146 aa		4.62	□□□□□ -1.67
FUN12	YAL035W	ALG12	P53730	551 aa		4.62	□□□□□ -1.67
FUN12	YAL035W	TCB3	Q03640	1545 aa	Known RBP	4.61	□□□□□ -1.67
FUN12	YAL035W	TPS3	P38426	1054 aa	Known RBP	4.61	□□□□□ -1.67
FUN12	YAL035W	RPN4	Q03465	531 aa		4.61	□□□□□ -1.67
FUN12	YAL035W	SIS2	P36024	562 aa		4.61	□□□□□ -1.67
FUN12	YAL035W	ERP5	P38819	212 aa		4.61	□□□□□ -1.67
FUN12	YAL035W	PKH3	Q03306	898 aa	Predicted RBP	4.61	□□□□□ -1.67
FUN12	YAL035W	RAD2	P07276	1031 aa		4.6	□□□□□ -1.67
FUN12	YAL035W	PEP12	P32854	288 aa		4.6	□□□□□ -1.67
FUN12	YAL035W	CSC1	Q06538	782 aa		4.6	□□□□□ -1.67
FUN12	YAL035W	TYW1	Q08960	810 aa	Known RBP	4.6	□□□□□ -1.67
FUN12	YAL035W	MSB4	Q12317	492 aa		4.6	□□□□□ -1.67
FUN12	YAL035W	PPX1	P38698	397 aa		4.6	□□□□□ -1.67
FUN12	YAL035W	PEX29	Q03370	554 aa		4.6	□□□□□ -1.67
FUN12	YAL035W	GAL11	P19659	1081 aa		4.59	□□□□□ -1.67
FUN12	YAL035W	SEC20	P28791	383 aa		4.59	□□□□□ -1.67
FUN12	YAL035W	EAP1	P36041	632 aa	Known RBP	4.59	□□□□□ -1.67
FUN12	YAL035W	ORC6	P38826	435 aa		4.59	□□□□□ -1.67
FUN12	YAL035W	YPR109W	Q06104	294 aa		4.59	□□□□□ -1.67
FUN12	YAL035W	YPR204W	Q08995	1032 aa		4.59	□□□□□ -1.67
FUN12	YAL035W	MMP1	Q12372	583 aa		4.59	□□□□□ -1.67
FUN12	YAL035W	SSB1	P11484	613 aa	Known RBP	4.59	□□□□□ -1.67
FUN12	YAL035W	FPR3	P38911	411 aa	Known RBP	4.59	□□□□□ -1.67
FUN12	YAL035W	SSB2	P40150	613 aa	Known RBP	4.59	□□□□□ -1.67
FUN12	YAL035W	YDL121C	Q07541	149 aa		4.59	□□□□□ -1.67
FUN12	YAL035W	YOL057W	Q08225	711 aa		4.59	□□□□□ -1.67
FUN12	YAL035W	YBL113C	Q7M4S9	792 aa		4.59	□□□□□ -1.67
FUN12	YAL035W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.68	not detected
FUN12	YAL035W	SEC8	P32855	1065 aa		4.59	□□□□□ -1.68
FUN12	YAL035W	KIP3	P53086	805 aa	Known RBP	4.59	□□□□□ -1.68
FUN12	YAL035W	AI4	P03878	556 aa		4.58	□□□□□ -1.68
FUN12	YAL035W	MPH3	P0CE00	602 aa		4.58	□□□□□ -1.68
FUN12	YAL035W	ARG8	P18544	423 aa		4.58	□□□□□ -1.68
FUN12	YAL035W	TSR4	P25040	408 aa		4.58	□□□□□ -1.68
FUN12	YAL035W	NFU1	P32860	256 aa		4.58	□□□□□ -1.68
FUN12	YAL035W	RPA135	P22138	1203 aa	Known RBP	4.58	□□□□□ -1.68
FUN12	YAL035W	RRP14	P36080	434 aa	Known RBP	4.58	□□□□□ -1.68
FUN12	YAL035W	TGL4	P36165	910 aa		4.58	□□□□□ -1.68
FUN12	YAL035W	RTF1	P53064	558 aa		4.58	□□□□□ -1.68
FUN12	YAL035W	POL32	P47110	350 aa		4.57	□□□□□ -1.68
FUN12	YAL035W	RIM21	P48565	533 aa		4.57	□□□□□ -1.68
FUN12	YAL035W	ALD3	P54114	506 aa		4.57	□□□□□ -1.68
FUN12	YAL035W	ENO1	P00924	437 aa	Known RBP	4.57	□□□□□ -1.68
FUN12	YAL035W	RDS2	P19541	446 aa	Known RBP	4.57	□□□□□ -1.68
FUN12	YAL035W	SOL3	P38858	249 aa		4.57	□□□□□ -1.68
FUN12	YAL035W	YEL023C	P39992	682 aa		4.57	□□□□□ -1.68
FUN12	YAL035W	GIR2	Q03768	265 aa	Predicted RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms