RNA–Protein interactions for RNA: Q0160

SCEI, Transcript of I-SceI DNA endonuclease, yeastyeast

Gene SCEI, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCEIQ0160 TY1A-DR1Q03856 440 aa9.28□□□□□ -0.92
SCEIQ0160 TY1A-ML1Q04706 440 aaKnown RBP9.28□□□□□ -0.92
SCEIQ0160 TY1A-BRQ12217 440 aa9.28□□□□□ -0.92
SCEIQ0160 TY1A-NL2Q12470 440 aa9.28□□□□□ -0.92
SCEIQ0160 TY1A-GR2Q12485 440 aa9.28□□□□□ -0.92
SCEIQ0160 COX6P00427 148 aa9.27□□□□□ -0.93
SCEIQ0160 GCD11P32481 527 aaKnown RBP9.27□□□□□ -0.93
SCEIQ0160 SEC2P17065 759 aa9.26□□□□□ -0.93
SCEIQ0160 AIR1P40507 360 aaKnown RBP9.26□□□□□ -0.93
SCEIQ0160 SPT16P32558 1035 aaKnown RBP9.25□□□□□ -0.93
SCEIQ0160 MVP1P40959 511 aaKnown RBP9.25□□□□□ -0.93
SCEIQ0160 GCR2Q01722 534 aa9.25□□□□□ -0.93
SCEIQ0160 LAM6Q08001 693 aa9.25□□□□□ -0.93
SCEIQ0160 VPS70P47161 811 aa9.24□□□□□ -0.93
SCEIQ0160 CLA4P48562 842 aa9.22□□□□□ -0.93
SCEIQ0160 RGR1P19263 1082 aa9.18□□□□□ -0.94
SCEIQ0160 YPR109WQ06104 294 aa9.18□□□□□ -0.94
SCEIQ0160 RRN7P40992 514 aa9.16□□□□□ -0.94
SCEIQ0160 FRK1Q03002 865 aaPredicted RBP9.16□□□□□ -0.94
SCEIQ0160 CDC4P07834 779 aa9.15□□□□□ -0.94
SCEIQ0160 PAT1P25644 796 aaKnown RBP9.14□□□□□ -0.95
SCEIQ0160 BDP1P46678 594 aa9.14□□□□□ -0.95
SCEIQ0160 HED1Q03937 162 aa9.09□□□□□ -0.95
SCEIQ0160 KEX2P13134 814 aa9.07□□□□□ -0.96
SCEIQ0160 MET22P32179 357 aa9.07□□□□□ -0.96
SCEIQ0160 ERF2Q06551 359 aa9.06□□□□□ -0.96
SCEIQ0160 PSE1P32337 1089 aaKnown RBP9.02□□□□□ -0.97
SCEIQ0160 ENV9Q08651 330 aa9.02□□□□□ -0.97
SCEIQ0160 CKB1P43639 278 aa9□□□□□ -0.97
SCEIQ0160 MOD5P07884 428 aa8.99□□□□□ -0.97
SCEIQ0160 PAC1P39946 494 aaKnown RBP8.99□□□□□ -0.97
SCEIQ0160 PBS2P08018 668 aa8.98□□□□□ -0.97
SCEIQ0160 CLB5P30283 435 aa8.97□□□□□ -0.97
SCEIQ0160 AGE1Q04412 482 aa8.96□□□□□ -0.98
SCEIQ0160 TUB4P53378 473 aa8.94□□□□□ -0.98
SCEIQ0160 MET32Q12041 191 aa8.94□□□□□ -0.98
SCEIQ0160 RTF1P53064 558 aa8.93□□□□□ -0.98
SCEIQ0160 YDR444WQ04093 687 aa8.93□□□□□ -0.98
SCEIQ0160 ASH1P34233 588 aa8.92□□□□□ -0.98
SCEIQ0160 AFT1P22149 690 aa8.91□□□□□ -0.98
SCEIQ0160 MAM3Q12296 706 aa8.89□□□□□ -0.99
SCEIQ0160 HST3P53687 447 aa8.88□□□□□ -0.99
SCEIQ0160 YNL115CP53925 644 aa8.88□□□□□ -0.99
SCEIQ0160 PUS5Q06244 254 aa8.88□□□□□ -0.99
SCEIQ0160 YDL176WQ12027 708 aa8.88□□□□□ -0.99
SCEIQ0160 LCB5Q06147 687 aaKnown RBP8.87□□□□□ -0.99
SCEIQ0160 SIT4P20604 311 aa8.84□□□□□ -0.99
SCEIQ0160 DSF2P38213 736 aa8.82□□□□□ -1
SCEIQ0160 TPD3P31383 635 aa8.81□□□□□ -1
SCEIQ0160 IES2P40154 320 aa8.8□□□□□ -1
SCEIQ0160 TEA1P47988 759 aa8.8□□□□□ -1
SCEIQ0160 RRD1P40454 393 aaKnown RBP8.79□□□□□ -1
SCEIQ0160 KXD1P53158 218 aa8.79□□□□□ -1
SCEIQ0160 YJR115WP47152 169 aa8.78□□□□□ -1
SCEIQ0160 HXT10P43581 546 aa8.76□□□□□ -1.01
SCEIQ0160 NUP42P49686 430 aaKnown RBP8.76□□□□□ -1.01
SCEIQ0160 NIS1P53939 407 aa8.76□□□□□ -1.01
SCEIQ0160 SYH1Q02875 849 aaKnown RBP8.74□□□□□ -1.01
SCEIQ0160 MSB3P48566 633 aaPredicted RBP8.73□□□□□ -1.01
SCEIQ0160 MTC5Q03897 1148 aa8.73□□□□□ -1.01
SCEIQ0160 SAS10Q12136 610 aaPredicted RBP8.73□□□□□ -1.01
SCEIQ0160 PDC1P06169 563 aaKnown RBP8.72□□□□□ -1.01
SCEIQ0160 SLY41P22215 453 aa8.67□□□□□ -1.02
SCEIQ0160 FPK1P53739 893 aa8.67□□□□□ -1.02
SCEIQ0160 DIT2P21595 489 aa8.65□□□□□ -1.02
SCEIQ0160 UGA3P26370 528 aa8.64□□□□□ -1.03
SCEIQ0160 RPA14P50106 137 aa8.64□□□□□ -1.03
SCEIQ0160 ALR1Q08269 859 aa8.64□□□□□ -1.03
SCEIQ0160 YMR196WQ04336 1088 aa8.63□□□□□ -1.03
SCEIQ0160 PTK2P47116 818 aaKnown RBP8.62□□□□□ -1.03
SCEIQ0160 PUS6P53294 404 aa8.62□□□□□ -1.03
SCEIQ0160 YPR097WQ06839 1073 aa8.62□□□□□ -1.03
SCEIQ0160 ACO2P39533 789 aa8.61□□□□□ -1.03
SCEIQ0160 KIP2P28743 706 aa8.6□□□□□ -1.03
SCEIQ0160 CAF120P53836 1060 aa8.6□□□□□ -1.03
SCEIQ0160 TBF1Q02457 562 aa8.6□□□□□ -1.03
SCEIQ0160 YDL206WQ12424 762 aa8.6□□□□□ -1.03
SCEIQ0160 SPB4P25808 606 aaPredicted RBP8.59□□□□□ -1.03
SCEIQ0160 MRT4P33201 236 aaKnown RBP8.59□□□□□ -1.03
SCEIQ0160 OPT2Q06593 877 aa8.59□□□□□ -1.03
SCEIQ0160 YLR346CQ06139 101 aa8.58□□□□□ -1.04
SCEIQ0160 SRF1Q12516 437 aa8.58□□□□□ -1.04
SCEIQ0160 IXR1P33417 597 aa8.57□□□□□ -1.04
SCEIQ0160 BUB1P41695 1021 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
SCEIQ0160 HST2P53686 357 aa8.56□□□□□ -1.04
SCEIQ0160 TRM1P15565 570 aaKnown RBP8.55□□□□□ -1.04
SCEIQ0160 RTT106P40161 455 aa8.55□□□□□ -1.04
SCEIQ0160 SCJ1P25303 377 aa8.53□□□□□ -1.04
SCEIQ0160 GLY1P37303 387 aaKnown RBP8.53□□□□□ -1.04
SCEIQ0160 NUP85P46673 744 aa8.53□□□□□ -1.04
SCEIQ0160 DMA1P38823 416 aa8.51□□□□□ -1.05
SCEIQ0160 TYW1Q08960 810 aaKnown RBP8.51□□□□□ -1.05
SCEIQ0160 MMP1Q12372 583 aa8.49□□□□□ -1.05
SCEIQ0160 TRK2P28584 889 aa8.48□□□□□ -1.05
SCEIQ0160 SCW11P53189 542 aa8.47□□□□□ -1.05
SCEIQ0160 MIP1P15801 1254 aa8.46□□□□□ -1.06
SCEIQ0160 TY1A-BLQ12266 440 aa8.46□□□□□ -1.06
SCEIQ0160 GLN1P32288 370 aaKnown RBP8.45□□□□□ -1.06
SCEIQ0160 YIR007WP40566 764 aa8.45□□□□□ -1.06
SCEIQ0160 YGR035CP53222 116 aa8.45□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms