RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 CSB-PGBD3P0DP91 1061 aa12.21□□□□□ -0.45
CACNA1D-230ENST00000640483 ANKRD30AQ9BXX3 1397 aa12.21□□□□□ -0.45
CACNA1D-230ENST00000640483 G3V3G9 751 aa12.21□□□□□ -0.45
CACNA1D-230ENST00000640483 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
CACNA1D-230ENST00000640483 CCDC136Q96JN2 1154 aa12.21□□□□□ -0.45
CACNA1D-230ENST00000640483 ANP32BQ92688 251 aaKnown RBP12.21□□□□□ -0.46
CACNA1D-230ENST00000640483 WASHC2CQ9Y4E1 1318 aa12.21□□□□□ -0.46
CACNA1D-230ENST00000640483 U2SURPO15042 1029 aaKnown RBP12.2□□□□□ -0.46
CACNA1D-230ENST00000640483 RSPH4AQ5TD94 716 aa12.2□□□□□ -0.46
CACNA1D-230ENST00000640483 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
CACNA1D-230ENST00000640483 FKBP8Q14318 412 aa12.2□□□□□ -0.46
CACNA1D-230ENST00000640483 RAPGEF2Q9Y4G8 1499 aa12.2□□□□□ -0.46
CACNA1D-230ENST00000640483 GAPVD1Q14C86 1478 aa12.18□□□□□ -0.46
CACNA1D-230ENST00000640483 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
CACNA1D-230ENST00000640483 PTPRGP23470 1445 aa12.18□□□□□ -0.46
CACNA1D-230ENST00000640483 SF3B2Q13435 895 aaKnown RBP12.18□□□□□ -0.46
CACNA1D-230ENST00000640483 NEUROD2Q15784 382 aa12.18□□□□□ -0.46
CACNA1D-230ENST00000640483 PKD2Q13563 968 aa12.17□□□□□ -0.46
CACNA1D-230ENST00000640483 FTSJ3Q8IY81 847 aaKnown RBP12.17□□□□□ -0.46
CACNA1D-230ENST00000640483 CCDC18Q5T9S5 1454 aa12.17□□□□□ -0.46
CACNA1D-230ENST00000640483 GRIN2BQ13224 1484 aa12.16□□□□□ -0.46
CACNA1D-230ENST00000640483 HNRNPMP52272 730 aaKnown RBP eCLIP12.16□□□□□ -0.46
CACNA1D-230ENST00000640483 MSH5O43196 834 aa12.15□□□□□ -0.46
CACNA1D-230ENST00000640483 CC2D1BQ5T0F9 858 aaKnown RBP12.15□□□□□ -0.46
CACNA1D-230ENST00000640483 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
CACNA1D-230ENST00000640483 NUP155O75694 1391 aa12.15□□□□□ -0.46
CACNA1D-230ENST00000640483 MORC1Q86VD1 984 aa12.15□□□□□ -0.47
CACNA1D-230ENST00000640483 RTF1Q92541 710 aaKnown RBP12.14□□□□□ -0.47
CACNA1D-230ENST00000640483 CHMP4BQ9H444 224 aaKnown RBP12.14□□□□□ -0.47
CACNA1D-230ENST00000640483 ISY1Q9ULR0 285 aaKnown RBP12.14□□□□□ -0.47
CACNA1D-230ENST00000640483 CASC1Q6TDU7 716 aa12.14□□□□□ -0.47
CACNA1D-230ENST00000640483 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
CACNA1D-230ENST00000640483 OS9Q13438 667 aaPredicted RBP12.13□□□□□ -0.47
CACNA1D-230ENST00000640483 FAM69CQ0P6D2 419 aa12.13□□□□□ -0.47
CACNA1D-230ENST00000640483 SIN3AQ96ST3 1273 aa12.12□□□□□ -0.47
CACNA1D-230ENST00000640483 EIF3AQ14152 1382 aaKnown RBP12.12□□□□□ -0.47
CACNA1D-230ENST00000640483 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
CACNA1D-230ENST00000640483 EIF5BO60841 1220 aaKnown RBP12.11□□□□□ -0.47
CACNA1D-230ENST00000640483 CLSTN1O94985 981 aa12.11□□□□□ -0.47
CACNA1D-230ENST00000640483 FHOD3Q2V2M9 1422 aa12.1□□□□□ -0.47
CACNA1D-230ENST00000640483 NGDNQ8NEJ9 315 aaKnown RBP12.09□□□□□ -0.47
CACNA1D-230ENST00000640483 SETD5Q9C0A6 1442 aa12.09□□□□□ -0.47
CACNA1D-230ENST00000640483 TOP2BQ02880 1626 aa12.09□□□□□ -0.47
CACNA1D-230ENST00000640483 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
CACNA1D-230ENST00000640483 MS4A1P11836 297 aa12.09□□□□□ -0.47
CACNA1D-230ENST00000640483 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
CACNA1D-230ENST00000640483 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
CACNA1D-230ENST00000640483 TERF2IPQ9NYB0 399 aa12.05□□□□□ -0.48
CACNA1D-230ENST00000640483 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
CACNA1D-230ENST00000640483 CUX1P39880 1505 aa12.05□□□□□ -0.48
CACNA1D-230ENST00000640483 TIMELESSQ9UNS1 1208 aa12.05□□□□□ -0.48
CACNA1D-230ENST00000640483 AQRO60306 1485 aaKnown RBP eCLIP12.04□□□□□ -0.48
CACNA1D-230ENST00000640483 MPHOSPH9Q99550 1183 aa12.04□□□□□ -0.48
CACNA1D-230ENST00000640483 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
CACNA1D-230ENST00000640483 CHMP4AQ9BY43 222 aa12.03□□□□□ -0.48
CACNA1D-230ENST00000640483 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
CACNA1D-230ENST00000640483 IGF1RP08069 1367 aa12.03□□□□□ -0.48
CACNA1D-230ENST00000640483 NCLP19338 710 aaKnown RBP12.03□□□□□ -0.48
CACNA1D-230ENST00000640483 FRAT1Q92837 279 aaPredicted RBP12.03□□□□□ -0.48
CACNA1D-230ENST00000640483 CALD1Q05682 793 aaKnown RBP12.02□□□□□ -0.49
CACNA1D-230ENST00000640483 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
CACNA1D-230ENST00000640483 CWC22Q9HCG8 908 aaKnown RBP12.02□□□□□ -0.49
CACNA1D-230ENST00000640483 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
CACNA1D-230ENST00000640483 URB2Q14146 1524 aaKnown RBP12□□□□□ -0.49
CACNA1D-230ENST00000640483 EVA1CP58658 441 aa12□□□□□ -0.49
CACNA1D-230ENST00000640483 AMPHP49418 695 aa11.99□□□□□ -0.49
CACNA1D-230ENST00000640483 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
CACNA1D-230ENST00000640483 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
CACNA1D-230ENST00000640483 BECN1Q14457 450 aa11.99□□□□□ -0.49
CACNA1D-230ENST00000640483 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
CACNA1D-230ENST00000640483 KTN1Q86UP2 1357 aaKnown RBP11.99□□□□□ -0.49
CACNA1D-230ENST00000640483 VGFO15240 615 aaPredicted RBP11.98□□□□□ -0.49
CACNA1D-230ENST00000640483 IRX6P78412 446 aaPredicted RBP11.98□□□□□ -0.49
CACNA1D-230ENST00000640483 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.98□□□□□ -0.49
CACNA1D-230ENST00000640483 FGD1P98174 961 aa11.98□□□□□ -0.49
CACNA1D-230ENST00000640483 ZRSR1Q15695 479 aaKnown RBP11.98□□□□□ -0.49
CACNA1D-230ENST00000640483 GTF2E1P29083 439 aaPredicted RBP11.97□□□□□ -0.49
CACNA1D-230ENST00000640483 MIER1Q8N108 512 aa11.97□□□□□ -0.49
CACNA1D-230ENST00000640483 KCNJ4P48050 445 aa11.97□□□□□ -0.49
CACNA1D-230ENST00000640483 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
CACNA1D-230ENST00000640483 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.97□□□□□ -0.49
CACNA1D-230ENST00000640483 U2AF1L5P0DN76 240 aaPredicted RBP11.95□□□□□ -0.5
CACNA1D-230ENST00000640483 U2AF1Q01081 240 aaKnown RBP eCLIP11.95□□□□□ -0.5
CACNA1D-230ENST00000640483 PRM3Q9NNZ6 103 aa11.95□□□□□ -0.5
CACNA1D-230ENST00000640483 SNAPC4Q5SXM2 1469 aa11.95□□□□□ -0.5
CACNA1D-230ENST00000640483 HSPA5P11021 654 aaKnown RBP11.94□□□□□ -0.5
CACNA1D-230ENST00000640483 ERICH3Q5RHP9 1530 aa11.94□□□□□ -0.5
CACNA1D-230ENST00000640483 WDR62O43379 1518 aa11.94□□□□□ -0.5
CACNA1D-230ENST00000640483 CCDC144AA2RUR9 1427 aa11.93□□□□□ -0.5
CACNA1D-230ENST00000640483 GOLGA6L22H0YM25 854 aa11.93□□□□□ -0.5
CACNA1D-230ENST00000640483 SYNJ2O15056 1496 aa11.93□□□□□ -0.5
CACNA1D-230ENST00000640483 LTV1Q96GA3 475 aaPredicted RBP11.93□□□□□ -0.5
CACNA1D-230ENST00000640483 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
CACNA1D-230ENST00000640483 ATF3P18847 181 aa11.92□□□□□ -0.5
CACNA1D-230ENST00000640483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.92□□□□□ -0.5
CACNA1D-230ENST00000640483 NAP1L2Q9ULW6 460 aaPredicted RBP11.92□□□□□ -0.5
CACNA1D-230ENST00000640483 BIVM-ERCC5R4GMW8 1640 aa11.92□□□□□ -0.5
CACNA1D-230ENST00000640483 DDRGK1Q96HY6 314 aa11.92□□□□□ -0.5
CACNA1D-230ENST00000640483 STK31Q9BXU1 1019 aa11.92□□□□□ -0.5
CACNA1D-230ENST00000640483 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms