RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 RAPGEF3O95398 923 aa10.63□□□□□ -0.71
PRKCH-228ENST00000640011 ABCA9Q8IUA7 1624 aa10.62□□□□□ -0.71
PRKCH-228ENST00000640011 PRXQ9BXM0 1461 aa10.62□□□□□ -0.71
PRKCH-228ENST00000640011 CAPN15O75808 1086 aa10.62□□□□□ -0.71
PRKCH-228ENST00000640011 POGZQ7Z3K3 1410 aa10.61□□□□□ -0.71
PRKCH-228ENST00000640011 LMTK3Q96Q04 1460 aa10.61□□□□□ -0.71
PRKCH-228ENST00000640011 BCORL1Q5H9F3 1711 aa10.59□□□□□ -0.71
PRKCH-228ENST00000640011 ARID3CA6NKF2 412 aa10.58□□□□□ -0.72
PRKCH-228ENST00000640011 DENND4BO75064 1496 aaPredicted RBP10.57□□□□□ -0.72
PRKCH-228ENST00000640011 PLEKHD1A6NEE1 506 aa10.57□□□□□ -0.72
PRKCH-228ENST00000640011 P3H3Q8IVL6 736 aa10.57□□□□□ -0.72
PRKCH-228ENST00000640011 AKNAQ7Z591 1439 aa10.57□□□□□ -0.72
PRKCH-228ENST00000640011 FANCAO15360 1455 aa10.56□□□□□ -0.72
PRKCH-228ENST00000640011 MADDQ8WXG6 1647 aa10.56□□□□□ -0.72
PRKCH-228ENST00000640011 MKRN4PQ13434 485 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-228ENST00000640011 POLA2Q14181 598 aa10.56□□□□□ -0.72
PRKCH-228ENST00000640011 FHOD3Q2V2M9 1422 aa10.56□□□□□ -0.72
PRKCH-228ENST00000640011 ARHGEF40Q8TER5 1519 aa10.55□□□□□ -0.72
PRKCH-228ENST00000640011 CERKQ8TCT0 537 aa10.55□□□□□ -0.72
PRKCH-228ENST00000640011 MAGI2Q86UL8 1455 aa10.55□□□□□ -0.72
PRKCH-228ENST00000640011 RAPGEF6Q8TEU7 1601 aa10.54□□□□□ -0.72
PRKCH-228ENST00000640011 FRMPD1Q5SYB0 1578 aa10.53□□□□□ -0.72
PRKCH-228ENST00000640011 CFAP74Q9C0B2 1584 aa10.53□□□□□ -0.72
PRKCH-228ENST00000640011 EFCAB5A4FU69 1503 aa10.52□□□□□ -0.73
PRKCH-228ENST00000640011 SAMD9Q5K651 1589 aa10.52□□□□□ -0.73
PRKCH-228ENST00000640011 NUP153P49790 1475 aaKnown RBP10.51□□□□□ -0.73
PRKCH-228ENST00000640011 HSPA2P54652 639 aa10.51□□□□□ -0.73
PRKCH-228ENST00000640011 ZMYM4Q5VZL5 1548 aa10.5□□□□□ -0.73
PRKCH-228ENST00000640011 RIMS1Q86UR5 1692 aaKnown RBP10.5□□□□□ -0.73
PRKCH-228ENST00000640011 ZFYVE16Q7Z3T8 1539 aa10.49□□□□□ -0.73
PRKCH-228ENST00000640011 ABCB7O75027 752 aa10.49□□□□□ -0.73
PRKCH-228ENST00000640011 RICTORQ6R327 1708 aa10.48□□□□□ -0.73
PRKCH-228ENST00000640011 YEATS2Q9ULM3 1422 aa10.47□□□□□ -0.73
PRKCH-228ENST00000640011 SOCS7O14512 581 aa10.46□□□□□ -0.73
PRKCH-228ENST00000640011 MLECQ14165 292 aa10.46□□□□□ -0.73
PRKCH-228ENST00000640011 DISP3Q9P2K9 1392 aa10.46□□□□□ -0.74
PRKCH-228ENST00000640011 EEA1Q15075 1411 aa10.46□□□□□ -0.74
PRKCH-228ENST00000640011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.46□□□□□ -0.74
PRKCH-228ENST00000640011 TTC37Q6PGP7 1564 aa10.46□□□□□ -0.74
PRKCH-228ENST00000640011 ATP10AO60312 1499 aa10.44□□□□□ -0.74
PRKCH-228ENST00000640011 PLCH2O75038 1416 aa10.44□□□□□ -0.74
PRKCH-228ENST00000640011 C9orf84Q5VXU9 1444 aa10.44□□□□□ -0.74
PRKCH-228ENST00000640011 SCAPERQ9BY12 1400 aa10.44□□□□□ -0.74
PRKCH-228ENST00000640011 EFCAB2Q5VUJ9 269 aa10.44□□□□□ -0.74
PRKCH-228ENST00000640011 CDK11AQ9UQ88 783 aaPredicted RBP10.44□□□□□ -0.74
PRKCH-228ENST00000640011 UHRF1BP1Q6BDS2 1440 aa10.43□□□□□ -0.74
PRKCH-228ENST00000640011 DSG3P32926 999 aa10.43□□□□□ -0.74
PRKCH-228ENST00000640011 ARHGEF12Q9NZN5 1544 aa10.43□□□□□ -0.74
PRKCH-228ENST00000640011 HECW1Q76N89 1606 aa10.42□□□□□ -0.74
PRKCH-228ENST00000640011 RANGAP1P46060 587 aaPredicted RBP10.41□□□□□ -0.74
PRKCH-228ENST00000640011 FER1L4A9Z1Z3 1794 aa10.41□□□□□ -0.74
PRKCH-228ENST00000640011 PREX1Q8TCU6 1659 aa10.41□□□□□ -0.74
PRKCH-228ENST00000640011 ESF1Q9H501 851 aaKnown RBP10.4□□□□□ -0.74
PRKCH-228ENST00000640011 ZNF518AQ6AHZ1 1483 aa10.4□□□□□ -0.74
PRKCH-228ENST00000640011 PTPRTO14522 1441 aa10.4□□□□□ -0.75
PRKCH-228ENST00000640011 ILDR2Q71H61 639 aa10.38□□□□□ -0.75
PRKCH-228ENST00000640011 FMN1Q68DA7 1419 aa10.38□□□□□ -0.75
PRKCH-228ENST00000640011 IQSEC2Q5JU85 1478 aa10.37□□□□□ -0.75
PRKCH-228ENST00000640011 SPDYE4A6NLX3 237 aa10.37□□□□□ -0.75
PRKCH-228ENST00000640011 CEBPAP49715 358 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-228ENST00000640011 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
PRKCH-228ENST00000640011 SIGLEC1Q9BZZ2 1709 aa10.36□□□□□ -0.75
PRKCH-228ENST00000640011 CLIP1P30622 1438 aa10.35□□□□□ -0.75
PRKCH-228ENST00000640011 REREQ9P2R6 1566 aa10.35□□□□□ -0.75
PRKCH-228ENST00000640011 TRAPPC8Q9Y2L5 1435 aa10.34□□□□□ -0.75
PRKCH-228ENST00000640011 CDK13Q14004 1512 aaKnown RBP10.34□□□□□ -0.75
PRKCH-228ENST00000640011 SETD1BQ9UPS6 1966 aaKnown RBP10.34□□□□□ -0.75
PRKCH-228ENST00000640011 KDM5CP41229 1560 aa10.34□□□□□ -0.75
PRKCH-228ENST00000640011 CNTLNQ9NXG0 1405 aa10.33□□□□□ -0.76
PRKCH-228ENST00000640011 AFAP1Q8N556 730 aa10.33□□□□□ -0.76
PRKCH-228ENST00000640011 ATP1B4Q9UN42 357 aaPredicted RBP10.33□□□□□ -0.76
PRKCH-228ENST00000640011 MLH3Q9UHC1 1453 aa10.33□□□□□ -0.76
PRKCH-228ENST00000640011 SPATA31D1Q6ZQQ2 1576 aa10.33□□□□□ -0.76
PRKCH-228ENST00000640011 ARHGAP5Q13017 1502 aa10.33□□□□□ -0.76
PRKCH-228ENST00000640011 TROQ12816 1431 aaPredicted RBP10.33□□□□□ -0.76
PRKCH-228ENST00000640011 CACNB1Q02641 598 aaPredicted RBP10.32□□□□□ -0.76
PRKCH-228ENST00000640011 MYO5CQ9NQX4 1742 aa10.32□□□□□ -0.76
PRKCH-228ENST00000640011 KIF14Q15058 1648 aa10.32□□□□□ -0.76
PRKCH-228ENST00000640011 AGLP35573 1532 aa10.32□□□□□ -0.76
PRKCH-228ENST00000640011 STRCQ7RTU9 1775 aa10.31□□□□□ -0.76
PRKCH-228ENST00000640011 ZBTB12Q9Y330 459 aaPredicted RBP10.3□□□□□ -0.76
PRKCH-228ENST00000640011 NPATQ14207 1427 aa10.3□□□□□ -0.76
PRKCH-228ENST00000640011 NCOA1Q15788 1441 aa10.3□□□□□ -0.76
PRKCH-228ENST00000640011 DIP2CQ9Y2E4 1556 aa10.29□□□□□ -0.76
PRKCH-228ENST00000640011 UBTFP17480 764 aaKnown RBP10.28□□□□□ -0.76
PRKCH-228ENST00000640011 PKD2Q13563 968 aa10.28□□□□□ -0.76
PRKCH-228ENST00000640011 PROM2Q8N271 834 aa10.28□□□□□ -0.76
PRKCH-228ENST00000640011 LTBP4Q8N2S1 1624 aa10.28□□□□□ -0.76
PRKCH-228ENST00000640011 C3P01024 1663 aa10.25□□□□□ -0.77
PRKCH-228ENST00000640011 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
PRKCH-228ENST00000640011 ZMYM3Q14202 1370 aa10.25□□□□□ -0.77
PRKCH-228ENST00000640011 ARHGAP35Q9NRY4 1499 aa10.24□□□□□ -0.77
PRKCH-228ENST00000640011 ABCC1P33527 1531 aa10.24□□□□□ -0.77
PRKCH-228ENST00000640011 ABCA6Q8N139 1617 aa10.24□□□□□ -0.77
PRKCH-228ENST00000640011 PLA2R1Q13018 1463 aa10.23□□□□□ -0.77
PRKCH-228ENST00000640011 CCDC18Q5T9S5 1454 aa10.23□□□□□ -0.77
PRKCH-228ENST00000640011 CAMSAP1Q5T5Y3 1602 aa10.23□□□□□ -0.77
PRKCH-228ENST00000640011 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
PRKCH-228ENST00000640011 SPAG9O60271 1321 aaKnown RBP10.21□□□□□ -0.78
PRKCH-228ENST00000640011 PREX2Q70Z35 1606 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms